RNA–Protein interactions for RNA: ENST00000545209.1

SPPL3-209, Transcript of signal peptide peptidase like 3, humanhuman

TSL 1 (best)

Gene SPPL3, Length 797 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-209ENST00000545209 SMCR8Q8TEV9 937 aaPredicted RBP7.69□□□□□ -1.18
SPPL3-209ENST00000545209 CEP170P1Q96L14 293 aa7.69□□□□□ -1.18
SPPL3-209ENST00000545209 IFT74Q96LB3 600 aa7.69□□□□□ -1.18
SPPL3-209ENST00000545209 LSM14BQ9BX40 385 aaKnown RBP7.69□□□□□ -1.18
SPPL3-209ENST00000545209 ST6GALNAC4Q9H4F1 302 aa7.69□□□□□ -1.18
SPPL3-209ENST00000545209 ATP6V0A4Q9HBG4 840 aa7.69□□□□□ -1.18
SPPL3-209ENST00000545209 POLD4Q9HCU8 107 aa7.69□□□□□ -1.18
SPPL3-209ENST00000545209 AGPAT3Q9NRZ7 376 aa7.69□□□□□ -1.18
SPPL3-209ENST00000545209 CEP72Q9P209 647 aa7.69□□□□□ -1.18
SPPL3-209ENST00000545209 SLC45A1Q9Y2W3 748 aa7.69□□□□□ -1.18
SPPL3-209ENST00000545209 EPN1Q9Y6I3 576 aaPredicted RBP7.69□□□□□ -1.18
SPPL3-209ENST00000545209 IGSF9BQ9UPX0 1349 aa7.69□□□□□ -1.18
SPPL3-209ENST00000545209 ZMYM2Q9UBW7 1377 aa7.69□□□□□ -1.18
SPPL3-209ENST00000545209 GTPBP10A4D1E9 387 aaKnown RBP7.68□□□□□ -1.18
SPPL3-209ENST00000545209 CCDC169A6NNP5 214 aa7.68□□□□□ -1.18
SPPL3-209ENST00000545209 RNF225M0QZC1 329 aaPredicted RBP7.68□□□□□ -1.18
SPPL3-209ENST00000545209 CLIC2O15247 247 aa7.68□□□□□ -1.18
SPPL3-209ENST00000545209 TGFB1I1O43294 461 aa7.68□□□□□ -1.18
SPPL3-209ENST00000545209 EXOC3O60645 756 aa7.68□□□□□ -1.18
SPPL3-209ENST00000545209 AKAP3O75969 853 aa7.68□□□□□ -1.18
SPPL3-209ENST00000545209 NDUFA10O95299 355 aa7.68□□□□□ -1.18
SPPL3-209ENST00000545209 SKIP12755 728 aa7.68□□□□□ -1.18
SPPL3-209ENST00000545209 UBA1P22314 1058 aaKnown RBP7.68□□□□□ -1.18
SPPL3-209ENST00000545209 CASQ1P31415 396 aa7.68□□□□□ -1.18
SPPL3-209ENST00000545209 HNRNPH3P31942 346 aaKnown RBP7.68□□□□□ -1.18
SPPL3-209ENST00000545209 GTF2F1P35269 517 aaKnown RBP eCLIP7.68□□□□□ -1.18
SPPL3-209ENST00000545209 GCLCP48506 637 aaPredicted RBP7.68□□□□□ -1.18
SPPL3-209ENST00000545209 CYP2J2P51589 502 aa7.68□□□□□ -1.18
SPPL3-209ENST00000545209 NPEPPSP55786 919 aa7.68□□□□□ -1.18
SPPL3-209ENST00000545209 PEX3P56589 373 aa7.68□□□□□ -1.18
SPPL3-209ENST00000545209 RTP1P59025 263 aa7.68□□□□□ -1.18
SPPL3-209ENST00000545209 KCNA1Q09470 495 aa7.68□□□□□ -1.18
SPPL3-209ENST00000545209 MOGSQ13724 837 aa7.68□□□□□ -1.18
SPPL3-209ENST00000545209 HSP90AA2PQ14568 343 aaPredicted RBP7.68□□□□□ -1.18
SPPL3-209ENST00000545209 PPP2R5AQ15172 486 aa7.68□□□□□ -1.18
SPPL3-209ENST00000545209 SPA17Q15506 151 aa7.68□□□□□ -1.18
SPPL3-209ENST00000545209 EXOC3L4Q17RC7 722 aa7.68□□□□□ -1.18
SPPL3-209ENST00000545209 MAP1SQ66K74 1059 aaPredicted RBP7.68□□□□□ -1.18
SPPL3-209ENST00000545209 GPAT2Q6NUI2 795 aa7.68□□□□□ -1.18
SPPL3-209ENST00000545209 PDXDC1Q6P996 788 aa7.68□□□□□ -1.18
SPPL3-209ENST00000545209 GBP6Q6ZN66 633 aa7.68□□□□□ -1.18
SPPL3-209ENST00000545209 ANO5Q75V66 913 aa7.68□□□□□ -1.18
SPPL3-209ENST00000545209 RRAGAQ7L523 313 aa7.68□□□□□ -1.18
SPPL3-209ENST00000545209 CYFIP1Q7L576 1253 aa7.68□□□□□ -1.18
SPPL3-209ENST00000545209 LYSMD3Q7Z3D4 306 aa7.68□□□□□ -1.18
SPPL3-209ENST00000545209 HAUS6Q7Z4H7 955 aa7.68□□□□□ -1.18
SPPL3-209ENST00000545209 KIAA1328Q86T90 577 aa7.68□□□□□ -1.18
SPPL3-209ENST00000545209 FMNL3Q8IVF7 1028 aa7.68□□□□□ -1.18
SPPL3-209ENST00000545209 CCDC60Q8IWA6 550 aaPredicted RBP7.68□□□□□ -1.18
SPPL3-209ENST00000545209 C12orf56Q8IXR9 622 aa7.68□□□□□ -1.18
SPPL3-209ENST00000545209 C2orf69Q8N8R5 385 aa7.68□□□□□ -1.18
SPPL3-209ENST00000545209 GPRC5AQ8NFJ5 357 aa7.68□□□□□ -1.18
SPPL3-209ENST00000545209 SYN2Q92777 582 aaPredicted RBP7.68□□□□□ -1.18
SPPL3-209ENST00000545209 FAM167AQ96KS9 214 aa7.68□□□□□ -1.18
SPPL3-209ENST00000545209 CCDC42Q96M95 316 aa7.68□□□□□ -1.18
SPPL3-209ENST00000545209 FIZ1Q96SL8 496 aa7.68□□□□□ -1.18
SPPL3-209ENST00000545209 STRA6Q9BX79 667 aa7.68□□□□□ -1.18
SPPL3-209ENST00000545209 DEF6Q9H4E7 631 aa7.68□□□□□ -1.18
SPPL3-209ENST00000545209 GBA2Q9HCG7 927 aaPredicted RBP7.68□□□□□ -1.18
SPPL3-209ENST00000545209 LUC7LQ9NQ29 371 aaKnown RBP7.68□□□□□ -1.18
SPPL3-209ENST00000545209 PLCB1Q9NQ66 1216 aa7.68□□□□□ -1.18
SPPL3-209ENST00000545209 ZNF302Q9NR11 478 aa7.68□□□□□ -1.18
SPPL3-209ENST00000545209 AGPAT5Q9NUQ2 364 aa7.68□□□□□ -1.18
SPPL3-209ENST00000545209 MYO1AQ9UBC5 1043 aa7.68□□□□□ -1.18
SPPL3-209ENST00000545209 RBPJLQ9UBG7 517 aa7.68□□□□□ -1.18
SPPL3-209ENST00000545209 DNAI1Q9UI46 699 aa7.68□□□□□ -1.18
SPPL3-209ENST00000545209 PLAGL2Q9UPG8 496 aa7.68□□□□□ -1.18
SPPL3-209ENST00000545209 PPME1Q9Y570 386 aa7.68□□□□□ -1.18
SPPL3-209ENST00000545209 CCL15-CCL14A0A0B4J2E2 113 aa7.67□□□□□ -1.18
SPPL3-209ENST00000545209 TMEM150BA6NC51 233 aa7.67□□□□□ -1.18
SPPL3-209ENST00000545209 ASB14A6NK59 587 aa7.67□□□□□ -1.18
SPPL3-209ENST00000545209 RASSF10A6NK89 507 aa7.67□□□□□ -1.18
SPPL3-209ENST00000545209 EIF3CLB5ME19 914 aaKnown RBP7.67□□□□□ -1.18
SPPL3-209ENST00000545209 PDHXO00330 501 aa7.67□□□□□ -1.18
SPPL3-209ENST00000545209 NOP56O00567 594 aaKnown RBP7.67□□□□□ -1.18
SPPL3-209ENST00000545209 MAPK13O15264 365 aa7.67□□□□□ -1.18
SPPL3-209ENST00000545209 SLC16A4O15374 487 aa7.67□□□□□ -1.18
SPPL3-209ENST00000545209 ZNF862O60290 1169 aa7.67□□□□□ -1.18
SPPL3-209ENST00000545209 LZTS3O60299 673 aaPredicted RBP7.67□□□□□ -1.18
SPPL3-209ENST00000545209 N4BP1O75113 896 aaKnown RBP7.67□□□□□ -1.18
SPPL3-209ENST00000545209 ATG7O95352 703 aa7.67□□□□□ -1.18
SPPL3-209ENST00000545209 GGPS1O95749 300 aa7.67□□□□□ -1.18
SPPL3-209ENST00000545209 POLGP54098 1239 aaPredicted RBP7.67□□□□□ -1.18
SPPL3-209ENST00000545209 NCKAP1LP55160 1127 aa7.67□□□□□ -1.18
SPPL3-209ENST00000545209 GTF2BQ00403 316 aa7.67□□□□□ -1.18
SPPL3-209ENST00000545209 CETN1Q12798 172 aa7.67□□□□□ -1.18
SPPL3-209ENST00000545209 CCL15Q16663 113 aa7.67□□□□□ -1.18
SPPL3-209ENST00000545209 SLC9C1Q4G0N8 1177 aa7.67□□□□□ -1.18
SPPL3-209ENST00000545209 SFMBT2Q5VUG0 894 aa7.67□□□□□ -1.18
SPPL3-209ENST00000545209 TRIM65Q6PJ69 517 aa7.67□□□□□ -1.18
SPPL3-209ENST00000545209 WDR59Q6PJI9 974 aa7.67□□□□□ -1.18
SPPL3-209ENST00000545209 METTL7BQ6UX53 244 aa7.67□□□□□ -1.18
SPPL3-209ENST00000545209 INTS8Q75QN2 995 aaKnown RBP7.67□□□□□ -1.18
SPPL3-209ENST00000545209 TRMT1LQ7Z2T5 733 aaKnown RBP7.67□□□□□ -1.18
SPPL3-209ENST00000545209 PRICKLE2Q7Z3G6 844 aa7.67□□□□□ -1.18
SPPL3-209ENST00000545209 ANKRD23Q86SG2 305 aa7.67□□□□□ -1.18
SPPL3-209ENST00000545209 ACRBPQ8NEB7 543 aa7.67□□□□□ -1.18
SPPL3-209ENST00000545209 TMEM174Q8WUU8 243 aa7.67□□□□□ -1.18
SPPL3-209ENST00000545209 EIF3CQ99613 913 aaKnown RBP7.67□□□□□ -1.18
SPPL3-209ENST00000545209 CHP1Q99653 195 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms