RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 PCDHB7Q9Y5E2 793 aa8.21□□□□□ -1.1
CPSF7-224ENST00000544990 A0A0C4DFX4 3053 aa8.21□□□□□ -1.1
CPSF7-224ENST00000544990 ARID2Q68CP9 1835 aa8.21□□□□□ -1.1
CPSF7-224ENST00000544990 NLRC5Q86WI3 1866 aa8.2□□□□□ -1.1
CPSF7-224ENST00000544990 A0A087WZ62 844 aa8.2□□□□□ -1.1
CPSF7-224ENST00000544990 LCHNA4D1U4 455 aa8.2□□□□□ -1.1
CPSF7-224ENST00000544990 K7ELQ4 463 aaPredicted RBP8.2□□□□□ -1.1
CPSF7-224ENST00000544990 DLL1O00548 723 aa8.2□□□□□ -1.1
CPSF7-224ENST00000544990 ZBTB39O15060 712 aa8.2□□□□□ -1.1
CPSF7-224ENST00000544990 DGAT1O75907 488 aa8.2□□□□□ -1.1
CPSF7-224ENST00000544990 MUTP22033 750 aa8.2□□□□□ -1.1
CPSF7-224ENST00000544990 SFPQP23246 707 aaKnown RBP eCLIP8.2□□□□□ -1.1
CPSF7-224ENST00000544990 RPA1P27694 616 aa8.2□□□□□ -1.1
CPSF7-224ENST00000544990 PRPHP41219 470 aa8.2□□□□□ -1.1
CPSF7-224ENST00000544990 SARSP49591 514 aaKnown RBP8.2□□□□□ -1.1
CPSF7-224ENST00000544990 TOB1P50616 345 aaPredicted RBP8.2□□□□□ -1.1
CPSF7-224ENST00000544990 DRP2Q13474 957 aa8.2□□□□□ -1.1
CPSF7-224ENST00000544990 BTG3Q14201 252 aaPredicted RBP8.2□□□□□ -1.1
CPSF7-224ENST00000544990 MXD4Q14582 209 aaPredicted RBP8.2□□□□□ -1.1
CPSF7-224ENST00000544990 EMC2Q15006 297 aa8.2□□□□□ -1.1
CPSF7-224ENST00000544990 TMCO4Q5TGY1 634 aa8.2□□□□□ -1.1
CPSF7-224ENST00000544990 DTHD1Q6ZMT9 781 aa8.2□□□□□ -1.1
CPSF7-224ENST00000544990 BRAPQ7Z569 592 aa8.2□□□□□ -1.1
CPSF7-224ENST00000544990 CATSPER3Q86XQ3 398 aa8.2□□□□□ -1.1
CPSF7-224ENST00000544990 CYP4X1Q8N118 509 aa8.2□□□□□ -1.1
CPSF7-224ENST00000544990 FIBCD1Q8N539 461 aa8.2□□□□□ -1.1
CPSF7-224ENST00000544990 C4orf32Q8N8J7 132 aa8.2□□□□□ -1.1
CPSF7-224ENST00000544990 INTS4Q96HW7 963 aaKnown RBP8.2□□□□□ -1.1
CPSF7-224ENST00000544990 ZNF668Q96K58 619 aaPredicted RBP8.2□□□□□ -1.1
CPSF7-224ENST00000544990 NLRP4Q96MN2 994 aa8.2□□□□□ -1.1
CPSF7-224ENST00000544990 FDXACB1Q9BRP7 624 aaPredicted RBP8.2□□□□□ -1.1
CPSF7-224ENST00000544990 TMX1Q9H3N1 280 aa8.2□□□□□ -1.1
CPSF7-224ENST00000544990 DACT1Q9NYF0 836 aa8.2□□□□□ -1.1
CPSF7-224ENST00000544990 LRWD1Q9UFC0 647 aa8.2□□□□□ -1.1
CPSF7-224ENST00000544990 RWDD3Q9Y3V2 267 aa8.2□□□□□ -1.1
CPSF7-224ENST00000544990 PCDHB6Q9Y5E3 794 aa8.2□□□□□ -1.1
CPSF7-224ENST00000544990 COL4A3BPQ9Y5P4 624 aa8.2□□□□□ -1.1
CPSF7-224ENST00000544990 RALGAPA2Q2PPJ7 1873 aa8.19□□□□□ -1.1
CPSF7-224ENST00000544990 VPS37CA5D8V6 355 aaPredicted RBP8.19□□□□□ -1.1
CPSF7-224ENST00000544990 C9IYK1 514 aa8.19□□□□□ -1.1
CPSF7-224ENST00000544990 RFXAPO00287 272 aa8.19□□□□□ -1.1
CPSF7-224ENST00000544990 MED24O75448 989 aa8.19□□□□□ -1.1
CPSF7-224ENST00000544990 DGKIO75912 1065 aa8.19□□□□□ -1.1
CPSF7-224ENST00000544990 ARHGEF15O94989 841 aa8.19□□□□□ -1.1
CPSF7-224ENST00000544990 BMP15O95972 392 aa8.19□□□□□ -1.1
CPSF7-224ENST00000544990 SPATA31C1P0DKV0 1188 aa8.19□□□□□ -1.1
CPSF7-224ENST00000544990 POU3F3P20264 500 aaPredicted RBP8.19□□□□□ -1.1
CPSF7-224ENST00000544990 IBSPP21815 317 aaPredicted RBP8.19□□□□□ -1.1
CPSF7-224ENST00000544990 CCT6AP40227 531 aaKnown RBP8.19□□□□□ -1.1
CPSF7-224ENST00000544990 RARRES1P49788 294 aa8.19□□□□□ -1.1
CPSF7-224ENST00000544990 LAMTOR4Q0VGL1 99 aa8.19□□□□□ -1.1
CPSF7-224ENST00000544990 TFDP1Q14186 410 aa8.19□□□□□ -1.1
CPSF7-224ENST00000544990 ADGRE1Q14246 886 aa8.19□□□□□ -1.1
CPSF7-224ENST00000544990 KRT79Q5XKE5 535 aa8.19□□□□□ -1.1
CPSF7-224ENST00000544990 SRGAP1Q7Z6B7 1085 aa8.19□□□□□ -1.1
CPSF7-224ENST00000544990 HSCBQ8IWL3 235 aa8.19□□□□□ -1.1
CPSF7-224ENST00000544990 CMTR2Q8IYT2 770 aaKnown RBP8.19□□□□□ -1.1
CPSF7-224ENST00000544990 SLC17A8Q8NDX2 589 aa8.19□□□□□ -1.1
CPSF7-224ENST00000544990 PIGOQ8TEQ8 1089 aa8.19□□□□□ -1.1
CPSF7-224ENST00000544990 PRPF31Q8WWY3 499 aaKnown RBP8.19□□□□□ -1.1
CPSF7-224ENST00000544990 LINC01599Q8WXQ3 324 aa8.19□□□□□ -1.1
CPSF7-224ENST00000544990 SNX21Q969T3 373 aa8.19□□□□□ -1.1
CPSF7-224ENST00000544990 TMEM143Q96AN5 459 aa8.19□□□□□ -1.1
CPSF7-224ENST00000544990 ZNF689Q96CS4 500 aaPredicted RBP8.19□□□□□ -1.1
CPSF7-224ENST00000544990 ELAC1Q9H777 363 aaKnown RBP8.19□□□□□ -1.1
CPSF7-224ENST00000544990 ATP6V0A4Q9HBG4 840 aa8.19□□□□□ -1.1
CPSF7-224ENST00000544990 CHST12Q9NRB3 414 aa8.19□□□□□ -1.1
CPSF7-224ENST00000544990 TMEM161AQ9NX61 479 aa8.19□□□□□ -1.1
CPSF7-224ENST00000544990 LMCD1Q9NZU5 365 aa8.19□□□□□ -1.1
CPSF7-224ENST00000544990 DBR1Q9UK59 544 aaKnown RBP8.19□□□□□ -1.1
CPSF7-224ENST00000544990 MTUS1Q9ULD2 1270 aa8.19□□□□□ -1.1
CPSF7-224ENST00000544990 ADGRA3Q8IWK6 1321 aa8.19□□□□□ -1.1
CPSF7-224ENST00000544990 COL4A6Q14031 1691 aa8.18□□□□□ -1.1
CPSF7-224ENST00000544990 ARHGEF35A5YM69 484 aa8.18□□□□□ -1.1
CPSF7-224ENST00000544990 RBAK-RBAKDNI3L0D1 243 aa8.18□□□□□ -1.1
CPSF7-224ENST00000544990 MGEA5O60502 916 aa8.18□□□□□ -1.1
CPSF7-224ENST00000544990 EOMESO95936 686 aa8.18□□□□□ -1.1
CPSF7-224ENST00000544990 RB1P06400 928 aa8.18□□□□□ -1.1
CPSF7-224ENST00000544990 HSP90AA1P07900 732 aaKnown RBP8.18□□□□□ -1.1
CPSF7-224ENST00000544990 SRGAP2CP0DJJ0 459 aa8.18□□□□□ -1.1
CPSF7-224ENST00000544990 PHKA2P46019 1235 aa8.18□□□□□ -1.1
CPSF7-224ENST00000544990 FAM189BP81408 668 aa8.18□□□□□ -1.1
CPSF7-224ENST00000544990 ATP2C1P98194 919 aaPredicted RBP8.18□□□□□ -1.1
CPSF7-224ENST00000544990 POU5F1BQ06416 359 aa8.18□□□□□ -1.1
CPSF7-224ENST00000544990 NCBP1Q09161 790 aaKnown RBP8.18□□□□□ -1.1
CPSF7-224ENST00000544990 GRB10Q13322 594 aa8.18□□□□□ -1.1
CPSF7-224ENST00000544990 NNTQ13423 1086 aa8.18□□□□□ -1.1
CPSF7-224ENST00000544990 DSC3Q14574 896 aa8.18□□□□□ -1.1
CPSF7-224ENST00000544990 PCBP1Q15365 356 aaKnown RBP eCLIP8.18□□□□□ -1.1
CPSF7-224ENST00000544990 EPC2Q52LR7 807 aa8.18□□□□□ -1.1
CPSF7-224ENST00000544990 ARL6IP4Q66PJ3 421 aaKnown RBP8.18□□□□□ -1.1
CPSF7-224ENST00000544990 CATSPER4Q7RTX7 472 aa8.18□□□□□ -1.1
CPSF7-224ENST00000544990 FERMT3Q86UX7 667 aa8.18□□□□□ -1.1
CPSF7-224ENST00000544990 KSR1Q8IVT5 923 aa8.18□□□□□ -1.1
CPSF7-224ENST00000544990 TMEM192Q8IY95 271 aa8.18□□□□□ -1.1
CPSF7-224ENST00000544990 CRIPAKQ8N1N5 446 aa8.18□□□□□ -1.1
CPSF7-224ENST00000544990 IGSF22Q8N9C0 903 aa8.18□□□□□ -1.1
CPSF7-224ENST00000544990 RNF149Q8NC42 400 aa8.18□□□□□ -1.1
CPSF7-224ENST00000544990 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.18□□□□□ -1.1
CPSF7-224ENST00000544990 MCPH1Q8NEM0 835 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms