RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 CCDC149Q6ZUS6 474 aa18.08■□□□□ 0.48
DDX55-212ENST00000544738 TMEM169Q96HH4 297 aa18.08■□□□□ 0.48
DDX55-212ENST00000544738 DHX33Q9H6R0 707 aaKnown RBP18.08■□□□□ 0.48
DDX55-212ENST00000544738 GPR179Q6PRD1 2367 aa18.08■□□□□ 0.48
DDX55-212ENST00000544738 KRBA1A5PL33 1030 aa18.07■□□□□ 0.48
DDX55-212ENST00000544738 BCAR1P56945 870 aa18.07■□□□□ 0.48
DDX55-212ENST00000544738 SAFBQ15424 915 aaKnown RBP eCLIP18.07■□□□□ 0.48
DDX55-212ENST00000544738 GPR149Q86SP6 731 aa18.07■□□□□ 0.48
DDX55-212ENST00000544738 ZNF598Q86UK7 904 aaKnown RBP18.07■□□□□ 0.48
DDX55-212ENST00000544738 SLC22A17Q8WUG5 538 aa18.07■□□□□ 0.48
DDX55-212ENST00000544738 TCP11Q8WWU5 503 aa18.07■□□□□ 0.48
DDX55-212ENST00000544738 PSPC1Q8WXF1 523 aaKnown RBP18.07■□□□□ 0.48
DDX55-212ENST00000544738 DYDC2Q96IM9 177 aa18.07■□□□□ 0.48
DDX55-212ENST00000544738 NLRP4Q96MN2 994 aa18.07■□□□□ 0.48
DDX55-212ENST00000544738 MRPL9Q9BYD2 267 aaKnown RBP18.07■□□□□ 0.48
DDX55-212ENST00000544738 RGL1Q9NZL6 768 aa18.07■□□□□ 0.48
DDX55-212ENST00000544738 WRAP73Q9P2S5 460 aaPredicted RBP18.07■□□□□ 0.48
DDX55-212ENST00000544738 CA14Q9ULX7 337 aa18.07■□□□□ 0.48
DDX55-212ENST00000544738 COL4A3BPQ9Y5P4 624 aa18.07■□□□□ 0.48
DDX55-212ENST00000544738 CFAP47Q6ZTR5 3102 aa18.07■□□□□ 0.48
DDX55-212ENST00000544738 CARNS1A5YM72 827 aa18.06■□□□□ 0.48
DDX55-212ENST00000544738 ASAP2O43150 1006 aa18.06■□□□□ 0.48
DDX55-212ENST00000544738 NEMFO60524 1076 aa18.06■□□□□ 0.48
DDX55-212ENST00000544738 DCNP07585 359 aaKnown RBP18.06■□□□□ 0.48
DDX55-212ENST00000544738 RAB27AP51159 221 aa18.06■□□□□ 0.48
DDX55-212ENST00000544738 XKR9Q5GH70 373 aa18.06■□□□□ 0.48
DDX55-212ENST00000544738 CLLU1OSQ5K130 101 aa18.06■□□□□ 0.48
DDX55-212ENST00000544738 TWF2Q6IBS0 349 aaKnown RBP18.06■□□□□ 0.48
DDX55-212ENST00000544738 CATSPER4Q7RTX7 472 aa18.06■□□□□ 0.48
DDX55-212ENST00000544738 SRGAP1Q7Z6B7 1085 aa18.06■□□□□ 0.48
DDX55-212ENST00000544738 TPH2Q8IWU9 490 aa18.06■□□□□ 0.48
DDX55-212ENST00000544738 ZNF579Q8NAF0 562 aaKnown RBP18.06■□□□□ 0.48
DDX55-212ENST00000544738 HELQQ8TDG4 1101 aa18.06■□□□□ 0.48
DDX55-212ENST00000544738 PRPF31Q8WWY3 499 aaKnown RBP18.06■□□□□ 0.48
DDX55-212ENST00000544738 RSAD2Q8WXG1 361 aa18.06■□□□□ 0.48
DDX55-212ENST00000544738 ZSCAN31Q96LW9 406 aaPredicted RBP18.06■□□□□ 0.48
DDX55-212ENST00000544738 LLPHQ9BRT6 129 aaKnown RBP18.06■□□□□ 0.48
DDX55-212ENST00000544738 TTC12Q9H892 705 aaPredicted RBP18.06■□□□□ 0.48
DDX55-212ENST00000544738 IFT122Q9HBG6 1241 aa18.06■□□□□ 0.48
DDX55-212ENST00000544738 IGSF9Q9P2J2 1179 aa18.06■□□□□ 0.48
DDX55-212ENST00000544738 WNT16Q9UBV4 365 aa18.06■□□□□ 0.48
DDX55-212ENST00000544738 PIN4Q9Y237 131 aaKnown RBP18.06■□□□□ 0.48
DDX55-212ENST00000544738 SLITRK3O94933 977 aa18.05■□□□□ 0.48
DDX55-212ENST00000544738 LYPLA2O95372 231 aa18.05■□□□□ 0.48
DDX55-212ENST00000544738 SP9P0CG40 484 aa18.05■□□□□ 0.48
DDX55-212ENST00000544738 PHKA2P46019 1235 aa18.05■□□□□ 0.48
DDX55-212ENST00000544738 CYP4A11Q02928 519 aa18.05■□□□□ 0.48
DDX55-212ENST00000544738 CTTNQ14247 550 aaKnown RBP18.05■□□□□ 0.48
DDX55-212ENST00000544738 KSR1Q8IVT5 923 aa18.05■□□□□ 0.48
DDX55-212ENST00000544738 HSD17B14Q9BPX1 270 aa18.05■□□□□ 0.48
DDX55-212ENST00000544738 EIF2AK1Q9BQI3 630 aaKnown RBP18.05■□□□□ 0.48
DDX55-212ENST00000544738 ZBP1Q9H171 429 aa18.05■□□□□ 0.48
DDX55-212ENST00000544738 TBC1D17Q9HA65 648 aa18.05■□□□□ 0.48
DDX55-212ENST00000544738 ZFHX4Q86UP3 3567 aa18.05■□□□□ 0.48
DDX55-212ENST00000544738 ZNF623O75123 536 aa18.04■□□□□ 0.48
DDX55-212ENST00000544738 TXKP42681 527 aa18.04■□□□□ 0.48
DDX55-212ENST00000544738 FOSBP53539 338 aa18.04■□□□□ 0.48
DDX55-212ENST00000544738 LAMTOR4Q0VGL1 99 aa18.04■□□□□ 0.48
DDX55-212ENST00000544738 EMC2Q15006 297 aa18.04■□□□□ 0.48
DDX55-212ENST00000544738 TMEM143Q96AN5 459 aa18.04■□□□□ 0.48
DDX55-212ENST00000544738 C8orf76Q96K31 380 aa18.04■□□□□ 0.48
DDX55-212ENST00000544738 MTRQ99707 1265 aa18.04■□□□□ 0.48
DDX55-212ENST00000544738 SFXN1Q9H9B4 322 aa18.04■□□□□ 0.48
DDX55-212ENST00000544738 SH2B1Q9NRF2 756 aaPredicted RBP18.04■□□□□ 0.48
DDX55-212ENST00000544738 ANKEF1Q9NU02 776 aa18.04■□□□□ 0.48
DDX55-212ENST00000544738 ZC3H11AO75152 810 aaKnown RBP eCLIP18.03■□□□□ 0.48
DDX55-212ENST00000544738 SRGAP2CP0DJJ0 459 aa18.03■□□□□ 0.48
DDX55-212ENST00000544738 CTSAP10619 480 aa18.03■□□□□ 0.48
DDX55-212ENST00000544738 GBP2P32456 591 aaPredicted RBP18.03■□□□□ 0.48
DDX55-212ENST00000544738 HMGN5P82970 282 aaKnown RBP18.03■□□□□ 0.48
DDX55-212ENST00000544738 ST3GAL1Q11201 340 aa18.03■□□□□ 0.48
DDX55-212ENST00000544738 GIT2Q14161 759 aa18.03■□□□□ 0.48
DDX55-212ENST00000544738 MXD4Q14582 209 aaPredicted RBP18.03■□□□□ 0.48
DDX55-212ENST00000544738 PCBP1Q15365 356 aaKnown RBP eCLIP18.03■□□□□ 0.48
DDX55-212ENST00000544738 GLB1LQ6UWU2 654 aa18.03■□□□□ 0.48
DDX55-212ENST00000544738 FERMT3Q86UX7 667 aa18.03■□□□□ 0.48
DDX55-212ENST00000544738 PPFIBP1Q86W92 1011 aa18.03■□□□□ 0.48
DDX55-212ENST00000544738 TMEM173Q86WV6 379 aaPredicted RBP18.03■□□□□ 0.48
DDX55-212ENST00000544738 C1orf210Q8IVY1 113 aa18.03■□□□□ 0.48
DDX55-212ENST00000544738 CCDC83Q8IWF9 413 aa18.03■□□□□ 0.48
DDX55-212ENST00000544738 PGBD4Q96DM1 585 aa18.03■□□□□ 0.48
DDX55-212ENST00000544738 MTMR9Q96QG7 549 aa18.03■□□□□ 0.48
DDX55-212ENST00000544738 AGPAT5Q9NUQ2 364 aa18.03■□□□□ 0.48
DDX55-212ENST00000544738 FAM105AQ9NUU6 356 aa18.03■□□□□ 0.48
DDX55-212ENST00000544738 SIT1Q9Y3P8 196 aa18.03■□□□□ 0.48
DDX55-212ENST00000544738 ZBTB39O15060 712 aa18.02■□□□□ 0.48
DDX55-212ENST00000544738 DGAT1O75907 488 aa18.02■□□□□ 0.48
DDX55-212ENST00000544738 XRCC6P12956 609 aaKnown RBP eCLIP18.02■□□□□ 0.488e-8■■■□□ 14.6
DDX55-212ENST00000544738 KLRC2P26717 231 aa18.02■□□□□ 0.48
DDX55-212ENST00000544738 ORC2Q13416 577 aaPredicted RBP18.02■□□□□ 0.48
DDX55-212ENST00000544738 DDX53Q86TM3 631 aaKnown RBP18.02■□□□□ 0.48
DDX55-212ENST00000544738 SLC44A3Q8N4M1 653 aa18.02■□□□□ 0.48
DDX55-212ENST00000544738 RNF149Q8NC42 400 aa18.02■□□□□ 0.48
DDX55-212ENST00000544738 CCDC43Q96MW1 224 aaKnown RBP18.02■□□□□ 0.48
DDX55-212ENST00000544738 FOXP1Q9H334 677 aaPredicted RBP18.02■□□□□ 0.48
DDX55-212ENST00000544738 IRAK3Q9Y616 596 aa18.02■□□□□ 0.48
DDX55-212ENST00000544738 CHD6Q8TD26 2715 aa18.01■□□□□ 0.47
DDX55-212ENST00000544738 KINO60870 393 aaKnown RBP18.01■□□□□ 0.47
DDX55-212ENST00000544738 ATXN1P54253 815 aaKnown RBP18.01■□□□□ 0.47
DDX55-212ENST00000544738 GUCY1B3Q02153 619 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms