RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 RMDN3Q96TC7 470 aa4.75□□□□□ -1.65
SNHG1-220ENST00000544550 GPR20Q99678 358 aa4.75□□□□□ -1.65
SNHG1-220ENST00000544550 USP26Q9BXU7 913 aa4.75□□□□□ -1.65
SNHG1-220ENST00000544550 PUS7LQ9H0K6 701 aaKnown RBP4.75□□□□□ -1.65
SNHG1-220ENST00000544550 RASSF4Q9H2L5 321 aa4.75□□□□□ -1.65
SNHG1-220ENST00000544550 POMKQ9H5K3 350 aa4.75□□□□□ -1.65
SNHG1-220ENST00000544550 CYP26B1Q9NR63 512 aa4.75□□□□□ -1.65
SNHG1-220ENST00000544550 PUF60Q9UHX1 559 aaKnown RBP4.75□□□□□ -1.65
SNHG1-220ENST00000544550 DBR1Q9UK59 544 aaKnown RBP4.75□□□□□ -1.65
SNHG1-220ENST00000544550 ZNF215Q9UL58 517 aaPredicted RBP4.75□□□□□ -1.65
SNHG1-220ENST00000544550 DUSP12Q9UNI6 340 aa4.75□□□□□ -1.65
SNHG1-220ENST00000544550 SQORQ9Y6N5 450 aa4.75□□□□□ -1.65
SNHG1-220ENST00000544550 GREB1LQ9C091 1923 aaPredicted RBP4.75□□□□□ -1.65
SNHG1-220ENST00000544550 ABCB11O95342 1321 aa4.74□□□□□ -1.65
SNHG1-220ENST00000544550 ZDBF2Q9HCK1 2354 aa4.74□□□□□ -1.65
SNHG1-220ENST00000544550 ELOA3CA0A087WX78 387 aaPredicted RBP4.74□□□□□ -1.65
SNHG1-220ENST00000544550 KRTAP4-8A0A0G2JLE6 195 aa4.74□□□□□ -1.65
SNHG1-220ENST00000544550 ELOA3DA6NLF2 546 aaPredicted RBP4.74□□□□□ -1.65
SNHG1-220ENST00000544550 PDE2AO00408 941 aaPredicted RBP4.74□□□□□ -1.65
SNHG1-220ENST00000544550 NOP56O00567 594 aaKnown RBP4.74□□□□□ -1.65
SNHG1-220ENST00000544550 FSCN2O14926 492 aa4.74□□□□□ -1.65
SNHG1-220ENST00000544550 PI15O43692 258 aa4.74□□□□□ -1.65
SNHG1-220ENST00000544550 EOMESO95936 686 aa4.74□□□□□ -1.65
SNHG1-220ENST00000544550 ASGR2P07307 311 aa4.74□□□□□ -1.65
SNHG1-220ENST00000544550 CELA2BP08218 269 aaPredicted RBP4.74□□□□□ -1.65
SNHG1-220ENST00000544550 TGFB3P10600 412 aa4.74□□□□□ -1.65
SNHG1-220ENST00000544550 GHRP10912 638 aa4.74□□□□□ -1.65
SNHG1-220ENST00000544550 CPB1P15086 417 aa4.74□□□□□ -1.65
SNHG1-220ENST00000544550 ATP5JP18859 108 aa4.74□□□□□ -1.65
SNHG1-220ENST00000544550 EIF2AK2P19525 551 aaKnown RBP4.74□□□□□ -1.65
SNHG1-220ENST00000544550 ITPKAP23677 461 aa4.74□□□□□ -1.65
SNHG1-220ENST00000544550 SLC16A2P36021 539 aa4.74□□□□□ -1.65
SNHG1-220ENST00000544550 ZNF76P36508 570 aa4.74□□□□□ -1.65
SNHG1-220ENST00000544550 GRIA4P48058 902 aa4.74□□□□□ -1.65
SNHG1-220ENST00000544550 HSDL1Q3SXM5 330 aa4.74□□□□□ -1.65
SNHG1-220ENST00000544550 ELOA3BQ3SY89 546 aa4.74□□□□□ -1.65
SNHG1-220ENST00000544550 ATAT1Q5SQI0 421 aa4.74□□□□□ -1.65
SNHG1-220ENST00000544550 PERM1Q5SV97 790 aa4.74□□□□□ -1.65
SNHG1-220ENST00000544550 CELF3Q5SZQ8 465 aaKnown RBP4.74□□□□□ -1.65
SNHG1-220ENST00000544550 LLGL2Q6P1M3 1020 aa4.74□□□□□ -1.65
SNHG1-220ENST00000544550 XRRA1Q6P2D8 792 aa4.74□□□□□ -1.65
SNHG1-220ENST00000544550 SLCO4C1Q6ZQN7 724 aa4.74□□□□□ -1.65
SNHG1-220ENST00000544550 RASGRP2Q7LDG7 609 aa4.74□□□□□ -1.65
SNHG1-220ENST00000544550 OTOP3Q7RTS5 596 aa4.74□□□□□ -1.65
SNHG1-220ENST00000544550 C1orf210Q8IVY1 113 aa4.74□□□□□ -1.65
SNHG1-220ENST00000544550 THNSL1Q8IYQ7 743 aa4.74□□□□□ -1.65
SNHG1-220ENST00000544550 TRMT2AQ8IZ69 625 aaKnown RBP4.74□□□□□ -1.65
SNHG1-220ENST00000544550 GOLGA6L1Q8N7Z2 621 aa4.74□□□□□ -1.65
SNHG1-220ENST00000544550 ELOA3Q8NG57 546 aa4.74□□□□□ -1.65
SNHG1-220ENST00000544550 DDX1Q92499 740 aaKnown RBP4.74□□□□□ -1.65
SNHG1-220ENST00000544550 FRAT1Q92837 279 aaPredicted RBP4.74□□□□□ -1.65
SNHG1-220ENST00000544550 PLD4Q96BZ4 506 aa4.74□□□□□ -1.65
SNHG1-220ENST00000544550 C16orf70Q9BSU1 422 aa4.74□□□□□ -1.65
SNHG1-220ENST00000544550 APOL5Q9BWW9 433 aa4.74□□□□□ -1.65
SNHG1-220ENST00000544550 OXCT2Q9BYC2 517 aaPredicted RBP4.74□□□□□ -1.65
SNHG1-220ENST00000544550 KRTAP9-9Q9BYP9 154 aa4.74□□□□□ -1.65
SNHG1-220ENST00000544550 KRTAP9-4Q9BYQ2 154 aa4.74□□□□□ -1.65
SNHG1-220ENST00000544550 RBSNQ9H1K0 784 aa4.74□□□□□ -1.65
SNHG1-220ENST00000544550 BOLA2Q9H3K6 86 aa4.74□□□□□ -1.65
SNHG1-220ENST00000544550 RNPEPQ9H4A4 650 aa4.74□□□□□ -1.65
SNHG1-220ENST00000544550 EHMT1Q9H9B1 1298 aa4.74□□□□□ -1.65
SNHG1-220ENST00000544550 MLXIPQ9HAP2 919 aa4.74□□□□□ -1.65
SNHG1-220ENST00000544550 ZFYVE1Q9HBF4 777 aa4.74□□□□□ -1.65
SNHG1-220ENST00000544550 ERVK-5Q9HDB9 667 aa4.74□□□□□ -1.65
SNHG1-220ENST00000544550 IL1RAPL2Q9NP60 686 aa4.74□□□□□ -1.65
SNHG1-220ENST00000544550 ENTPD7Q9NQZ7 604 aa4.74□□□□□ -1.65
SNHG1-220ENST00000544550 FRRS1LQ9P0K9 344 aa4.74□□□□□ -1.65
SNHG1-220ENST00000544550 IGSF9Q9P2J2 1179 aa4.74□□□□□ -1.65
SNHG1-220ENST00000544550 WNT16Q9UBV4 365 aa4.74□□□□□ -1.65
SNHG1-220ENST00000544550 GDF2Q9UK05 429 aaPredicted RBP4.74□□□□□ -1.65
SNHG1-220ENST00000544550 NAGPAQ9UK23 515 aa4.74□□□□□ -1.65
SNHG1-220ENST00000544550 ANGPTL2Q9UKU9 493 aa4.74□□□□□ -1.65
SNHG1-220ENST00000544550 PPM1HQ9ULR3 514 aa4.74□□□□□ -1.65
SNHG1-220ENST00000544550 EXOC6BQ9Y2D4 811 aa4.74□□□□□ -1.65
SNHG1-220ENST00000544550 C5orf42Q9H799 3197 aa4.74□□□□□ -1.65
SNHG1-220ENST00000544550 ZFHX2Q9C0A1 2572 aaPredicted RBP4.74□□□□□ -1.65
SNHG1-220ENST00000544550 NRCAMQ92823 1304 aa4.73□□□□□ -1.65
SNHG1-220ENST00000544550 DCHS1Q96JQ0 3298 aa4.73□□□□□ -1.65
SNHG1-220ENST00000544550 A0A096LPE4 126 aa4.73□□□□□ -1.65
SNHG1-220ENST00000544550 A0A1W2PPZ6 126 aa4.73□□□□□ -1.65
SNHG1-220ENST00000544550 METTL12A8MUP2 240 aa4.73□□□□□ -1.65
SNHG1-220ENST00000544550 M0QZ92 97 aa4.73□□□□□ -1.65
SNHG1-220ENST00000544550 SMNDC1O75940 238 aaKnown RBP eCLIP4.73□□□□□ -1.653e-14■■■■■ 31.4
SNHG1-220ENST00000544550 FGF18O76093 207 aa4.73□□□□□ -1.65
SNHG1-220ENST00000544550 GGPS1O95749 300 aa4.73□□□□□ -1.65
SNHG1-220ENST00000544550 CHRNA1P02708 482 aa4.73□□□□□ -1.65
SNHG1-220ENST00000544550 LGALS2P05162 132 aa4.73□□□□□ -1.65
SNHG1-220ENST00000544550 ZFYP08048 801 aaPredicted RBP4.73□□□□□ -1.65
SNHG1-220ENST00000544550 SP9P0CG40 484 aa4.73□□□□□ -1.65
SNHG1-220ENST00000544550 HSPD1P10809 573 aaKnown RBP4.73□□□□□ -1.65
SNHG1-220ENST00000544550 SCG2P13521 617 aa4.73□□□□□ -1.65
SNHG1-220ENST00000544550 LAG3P18627 525 aa4.73□□□□□ -1.65
SNHG1-220ENST00000544550 NOVP48745 357 aa4.73□□□□□ -1.65
SNHG1-220ENST00000544550 RBM10P98175 930 aaKnown RBP4.73□□□□□ -1.65
SNHG1-220ENST00000544550 KRT17Q04695 432 aa4.73□□□□□ -1.65
SNHG1-220ENST00000544550 MGAT3Q09327 533 aa4.73□□□□□ -1.65
SNHG1-220ENST00000544550 RAD51AP2Q09MP3 1159 aa4.73□□□□□ -1.65
SNHG1-220ENST00000544550 LPIN1Q14693 890 aa4.73□□□□□ -1.65
SNHG1-220ENST00000544550 SPRED3Q2MJR0 410 aa4.73□□□□□ -1.65
SNHG1-220ENST00000544550 ZNF528Q3MIS6 628 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms