RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 PMS2P54278 862 aa13.62□□□□□ -0.23
CHD4-211ENST00000544484 YWHAHQ04917 246 aaPredicted RBP13.62□□□□□ -0.23
CHD4-211ENST00000544484 TTC25Q96NG3 672 aa13.62□□□□□ -0.23
CHD4-211ENST00000544484 NYAP2Q9P242 653 aa13.62□□□□□ -0.23
CHD4-211ENST00000544484 SUCLA2Q9P2R7 463 aaPredicted RBP13.62□□□□□ -0.23
CHD4-211ENST00000544484 STAP1Q9ULZ2 295 aa13.62□□□□□ -0.23
CHD4-211ENST00000544484 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.62□□□□□ -0.23
CHD4-211ENST00000544484 KITP10721 976 aa13.62□□□□□ -0.23
CHD4-211ENST00000544484 SPARCL1Q14515 664 aa13.62□□□□□ -0.23
CHD4-211ENST00000544484 LRRC31Q6UY01 552 aa13.62□□□□□ -0.23
CHD4-211ENST00000544484 FASTKD5Q7L8L6 764 aaKnown RBP13.62□□□□□ -0.23
CHD4-211ENST00000544484 AGPAT1Q99943 283 aa13.62□□□□□ -0.23
CHD4-211ENST00000544484 SLC8A2Q9UPR5 921 aa13.62□□□□□ -0.23
CHD4-211ENST00000544484 RASIP1Q5U651 963 aa13.61□□□□□ -0.23
CHD4-211ENST00000544484 ATG16L1Q676U5 607 aa13.61□□□□□ -0.23
CHD4-211ENST00000544484 TBC1D1Q86TI0 1168 aaPredicted RBP13.61□□□□□ -0.23
CHD4-211ENST00000544484 RHOT1Q8IXI2 618 aa13.61□□□□□ -0.23
CHD4-211ENST00000544484 RFFLQ8WZ73 363 aa13.61□□□□□ -0.23
CHD4-211ENST00000544484 ZCCHC17Q9NP64 241 aaKnown RBP13.61□□□□□ -0.23
CHD4-211ENST00000544484 OLA1Q9NTK5 396 aaKnown RBP13.61□□□□□ -0.23
CHD4-211ENST00000544484 AMACRQ9UHK6 382 aa13.61□□□□□ -0.23
CHD4-211ENST00000544484 ADAM21Q9UKJ8 722 aa13.61□□□□□ -0.23
CHD4-211ENST00000544484 PIN4Q9Y237 131 aaKnown RBP13.61□□□□□ -0.23
CHD4-211ENST00000544484 ZNF185O15231 689 aa13.61□□□□□ -0.23
CHD4-211ENST00000544484 CTDNEP1O95476 244 aa13.61□□□□□ -0.23
CHD4-211ENST00000544484 NR3C2P08235 984 aa13.61□□□□□ -0.23
CHD4-211ENST00000544484 CDH6P55285 790 aa13.61□□□□□ -0.23
CHD4-211ENST00000544484 ZNF280CQ8ND82 737 aa13.61□□□□□ -0.23
CHD4-211ENST00000544484 NCAPGQ9BPX3 1015 aa13.61□□□□□ -0.23
CHD4-211ENST00000544484 ASB14A6NK59 587 aa13.61□□□□□ -0.23
CHD4-211ENST00000544484 TNPO2O14787 897 aaKnown RBP13.61□□□□□ -0.23
CHD4-211ENST00000544484 GRIN1Q05586 938 aa13.61□□□□□ -0.23
CHD4-211ENST00000544484 SYCP2LQ5T4T6 812 aa13.61□□□□□ -0.23
CHD4-211ENST00000544484 HEATR6Q6AI08 1181 aaKnown RBP13.61□□□□□ -0.23
CHD4-211ENST00000544484 RSBN1LQ6PCB5 846 aaPredicted RBP13.61□□□□□ -0.23
CHD4-211ENST00000544484 OR6J1Q8NGC5 347 aa13.61□□□□□ -0.23
CHD4-211ENST00000544484 GGA3Q9NZ52 723 aa13.61□□□□□ -0.23
CHD4-211ENST00000544484 ZBBXA8MT70 800 aa13.61□□□□□ -0.23
CHD4-211ENST00000544484 SMIM24O75264 130 aa13.61□□□□□ -0.23
CHD4-211ENST00000544484 SCP2P22307 547 aa13.61□□□□□ -0.23
CHD4-211ENST00000544484 TMEM62Q0P6H9 643 aa13.61□□□□□ -0.23
CHD4-211ENST00000544484 CLEC17AQ6ZS10 378 aa13.61□□□□□ -0.23
CHD4-211ENST00000544484 DHX38Q92620 1227 aaKnown RBP13.61□□□□□ -0.23
CHD4-211ENST00000544484 ZNF512BQ96KM6 892 aaPredicted RBP13.61□□□□□ -0.23
CHD4-211ENST00000544484 JMJD4Q9H9V9 463 aa13.61□□□□□ -0.23
CHD4-211ENST00000544484 TXLNGQ9NUQ3 528 aa13.61□□□□□ -0.23
CHD4-211ENST00000544484 PPARGC1AQ9UBK2 798 aaKnown RBP13.61□□□□□ -0.23
CHD4-211ENST00000544484 KRT14P02533 472 aa13.61□□□□□ -0.23
CHD4-211ENST00000544484 PDIA2Q13087 525 aaKnown RBP13.61□□□□□ -0.23
CHD4-211ENST00000544484 HHIPL2Q6UWX4 724 aa13.61□□□□□ -0.23
CHD4-211ENST00000544484 CRLF3Q8IUI8 442 aa13.61□□□□□ -0.23
CHD4-211ENST00000544484 ZBED8Q8IZ13 594 aa13.61□□□□□ -0.23
CHD4-211ENST00000544484 SPON2Q9BUD6 331 aa13.61□□□□□ -0.23
CHD4-211ENST00000544484 VCPKMTQ9H867 229 aa13.61□□□□□ -0.23
CHD4-211ENST00000544484 CCDC195A0A1B0GUA6 201 aa13.61□□□□□ -0.23
CHD4-211ENST00000544484 UBE2Q2LH0YL09 131 aa13.61□□□□□ -0.23
CHD4-211ENST00000544484 GSTA4O15217 222 aa13.61□□□□□ -0.23
CHD4-211ENST00000544484 KRT7P08729 469 aa13.61□□□□□ -0.23
CHD4-211ENST00000544484 PDLIM2Q96JY6 352 aa13.61□□□□□ -0.23
CHD4-211ENST00000544484 PTPRMP28827 1452 aa13.6□□□□□ -0.23
CHD4-211ENST00000544484 SETBP1Q9Y6X0 1596 aa13.6□□□□□ -0.23
CHD4-211ENST00000544484 DYNC1LI2O43237 492 aaPredicted RBP13.6□□□□□ -0.23
CHD4-211ENST00000544484 FXR1P51114 621 aaKnown RBP eCLIP13.6□□□□□ -0.238e-7■■■■□ 19.3
CHD4-211ENST00000544484 EPM2AIP1Q7L775 607 aaPredicted RBP13.6□□□□□ -0.23
CHD4-211ENST00000544484 SAMD7Q7Z3H4 446 aa13.6□□□□□ -0.23
CHD4-211ENST00000544484 IFT43Q96FT9 208 aa13.6□□□□□ -0.23
CHD4-211ENST00000544484 ACAP3Q96P50 834 aa13.6□□□□□ -0.23
CHD4-211ENST00000544484 MOSPD1Q9UJG1 213 aa13.6□□□□□ -0.23
CHD4-211ENST00000544484 MID2Q9UJV3 735 aa13.6□□□□□ -0.23
CHD4-211ENST00000544484 AGAP1Q9UPQ3 857 aa13.6□□□□□ -0.23
CHD4-211ENST00000544484 CNTNAP5Q8WYK1 1306 aa13.6□□□□□ -0.23
CHD4-211ENST00000544484 ENTPD3O75355 529 aa13.6□□□□□ -0.23
CHD4-211ENST00000544484 KRT38O76015 456 aa13.6□□□□□ -0.23
CHD4-211ENST00000544484 CTSHP09668 335 aa13.6□□□□□ -0.23
CHD4-211ENST00000544484 CPA5Q8WXQ8 436 aa13.6□□□□□ -0.23
CHD4-211ENST00000544484 MS4A14Q96JA4 679 aa13.6□□□□□ -0.23
CHD4-211ENST00000544484 AGBL1Q96MI9 1066 aa13.6□□□□□ -0.23
CHD4-211ENST00000544484 SARS2Q9NP81 518 aaKnown RBP13.6□□□□□ -0.23
CHD4-211ENST00000544484 PAMP19021 973 aa13.6□□□□□ -0.23
CHD4-211ENST00000544484 GCKP35557 465 aa13.6□□□□□ -0.23
CHD4-211ENST00000544484 PEX19P40855 299 aa13.6□□□□□ -0.23
CHD4-211ENST00000544484 XKR3Q5GH77 459 aa13.6□□□□□ -0.23
CHD4-211ENST00000544484 URGCPQ8TCY9 931 aa13.6□□□□□ -0.23
CHD4-211ENST00000544484 TSR3Q9UJK0 312 aaKnown RBP13.6□□□□□ -0.23
CHD4-211ENST00000544484 PPP1R9AQ9ULJ8 1098 aa13.6□□□□□ -0.23
CHD4-211ENST00000544484 SPECC1L-ADORA2AF8WAN1 911 aa13.6□□□□□ -0.23
CHD4-211ENST00000544484 TRPA1O75762 1119 aa13.6□□□□□ -0.23
CHD4-211ENST00000544484 RARBP10826 455 aa13.6□□□□□ -0.23
CHD4-211ENST00000544484 LRRC14Q15048 493 aa13.6□□□□□ -0.23
CHD4-211ENST00000544484 TRIM10Q9UDY6 481 aa13.6□□□□□ -0.23
CHD4-211ENST00000544484 MAPK13O15264 365 aa13.6□□□□□ -0.23
CHD4-211ENST00000544484 DGAT1O75907 488 aa13.6□□□□□ -0.23
CHD4-211ENST00000544484 POU5F1BQ06416 359 aa13.6□□□□□ -0.23
CHD4-211ENST00000544484 MFSD14CQ5VZR4 134 aa13.6□□□□□ -0.23
CHD4-211ENST00000544484 RNF219Q5W0B1 726 aaPredicted RBP13.6□□□□□ -0.23
CHD4-211ENST00000544484 LPAR1Q92633 364 aa13.6□□□□□ -0.23
CHD4-211ENST00000544484 C7orf25Q9BPX7 421 aa13.6□□□□□ -0.23
CHD4-211ENST00000544484 ADAM33Q9BZ11 813 aa13.6□□□□□ -0.23
CHD4-211ENST00000544484 WNT8AQ9H1J5 351 aa13.6□□□□□ -0.23
CHD4-211ENST00000544484 NEXMIFQ5QGS0 1516 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms