RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 RPS6P62753 249 aaKnown RBP16.36■□□□□ 0.21
CHD4-210ENST00000544040 TBL3Q12788 808 aaKnown RBP16.36■□□□□ 0.21
CHD4-210ENST00000544040 FAM83BQ5T0W9 1011 aa16.36■□□□□ 0.21
CHD4-210ENST00000544040 TMEM154Q6P9G4 183 aa16.36■□□□□ 0.21
CHD4-210ENST00000544040 SH2D3CQ8N5H7 860 aa16.36■□□□□ 0.21
CHD4-210ENST00000544040 MAGEB5Q9BZ81 275 aa16.36■□□□□ 0.21
CHD4-210ENST00000544040 CCDC78A2IDD5 438 aa16.35■□□□□ 0.21
CHD4-210ENST00000544040 GRID2IPA4D2P6 1211 aa16.35■□□□□ 0.21
CHD4-210ENST00000544040 STK25O00506 426 aa16.35■□□□□ 0.21
CHD4-210ENST00000544040 ZBTB22O15209 634 aa16.35■□□□□ 0.21
CHD4-210ENST00000544040 STAT3P40763 770 aa16.35■□□□□ 0.21
CHD4-210ENST00000544040 VAMP7P51809 220 aa16.35■□□□□ 0.21
CHD4-210ENST00000544040 CACNB2Q08289 660 aaPredicted RBP16.35■□□□□ 0.21
CHD4-210ENST00000544040 AARS2Q5JTZ9 985 aaKnown RBP16.35■□□□□ 0.21
CHD4-210ENST00000544040 PADI6Q6TGC4 694 aa16.35■□□□□ 0.21
CHD4-210ENST00000544040 ZNF467Q7Z7K2 595 aaPredicted RBP16.35■□□□□ 0.21
CHD4-210ENST00000544040 DHX40Q8IX18 779 aaKnown RBP16.35■□□□□ 0.21
CHD4-210ENST00000544040 ATP11CQ8NB49 1132 aa16.35■□□□□ 0.21
CHD4-210ENST00000544040 ARHGEF1Q92888 912 aaKnown RBP16.35■□□□□ 0.21
CHD4-210ENST00000544040 PKD2L2Q9NZM6 624 aa16.35■□□□□ 0.21
CHD4-210ENST00000544040 POTEB3A0JP26 581 aa16.35■□□□□ 0.21
CHD4-210ENST00000544040 ANO9A1A5B4 782 aa16.35■□□□□ 0.21
CHD4-210ENST00000544040 POTECB2RU33 542 aa16.35■□□□□ 0.21
CHD4-210ENST00000544040 TCN1P20061 433 aaPredicted RBP16.35■□□□□ 0.21
CHD4-210ENST00000544040 CC2D2BQ6DHV5 1058 aa16.35■□□□□ 0.21
CHD4-210ENST00000544040 POTEBQ6S5H4 581 aa16.35■□□□□ 0.21
CHD4-210ENST00000544040 TMC4Q7Z404 712 aa16.35■□□□□ 0.21
CHD4-210ENST00000544040 STX19Q8N4C7 294 aa16.35■□□□□ 0.21
CHD4-210ENST00000544040 XXYLT1Q8NBI6 393 aa16.35■□□□□ 0.21
CHD4-210ENST00000544040 CNKSR1Q969H4 720 aa16.35■□□□□ 0.21
CHD4-210ENST00000544040 ASIC4Q96FT7 647 aa16.35■□□□□ 0.21
CHD4-210ENST00000544040 ASXL2Q76L83 1435 aa16.35■□□□□ 0.21
CHD4-210ENST00000544040 MKRN4PQ13434 485 aaPredicted RBP16.35■□□□□ 0.21
CHD4-210ENST00000544040 PRELPP51888 382 aa16.35■□□□□ 0.21
CHD4-210ENST00000544040 ZNF280CQ8ND82 737 aa16.35■□□□□ 0.21
CHD4-210ENST00000544040 PI4KBQ9UBF8 816 aa16.35■□□□□ 0.21
CHD4-210ENST00000544040 PRKAG2Q9UGJ0 569 aa16.35■□□□□ 0.21
CHD4-210ENST00000544040 MAD2L2Q9UI95 211 aa16.35■□□□□ 0.21
CHD4-210ENST00000544040 LOC102724428A0A0B4J2F2 783 aa16.35■□□□□ 0.21
CHD4-210ENST00000544040 ORC4O43929 436 aa16.35■□□□□ 0.21
CHD4-210ENST00000544040 HUS1O60921 280 aa16.35■□□□□ 0.21
CHD4-210ENST00000544040 ENO3P13929 434 aaPredicted RBP16.35■□□□□ 0.21
CHD4-210ENST00000544040 SIK1P57059 783 aa16.35■□□□□ 0.21
CHD4-210ENST00000544040 BTKQ06187 659 aa16.35■□□□□ 0.21
CHD4-210ENST00000544040 PIK3R5Q8WYR1 880 aa16.35■□□□□ 0.21
CHD4-210ENST00000544040 EML4Q9HC35 981 aaKnown RBP16.35■□□□□ 0.21
CHD4-210ENST00000544040 GIMAP4Q9NUV9 329 aa16.35■□□□□ 0.21
CHD4-210ENST00000544040 TMEM161AQ9NX61 479 aa16.35■□□□□ 0.21
CHD4-210ENST00000544040 ZBTB1Q9Y2K1 713 aa16.35■□□□□ 0.21
CHD4-210ENST00000544040 NMT2O60551 498 aa16.34■□□□□ 0.21
CHD4-210ENST00000544040 LCP1P13796 627 aa16.34■□□□□ 0.21
CHD4-210ENST00000544040 LONRF1Q17RB8 773 aa16.34■□□□□ 0.21
CHD4-210ENST00000544040 SH3RF3Q8TEJ3 882 aaPredicted RBP16.34■□□□□ 0.21
CHD4-210ENST00000544040 DBR1Q9UK59 544 aaKnown RBP16.34■□□□□ 0.21
CHD4-210ENST00000544040 ANGPT2O15123 496 aa16.34■□□□□ 0.21
CHD4-210ENST00000544040 DEAF1O75398 565 aaPredicted RBP16.34■□□□□ 0.21
CHD4-210ENST00000544040 CHN1P15882 459 aa16.34■□□□□ 0.21
CHD4-210ENST00000544040 LRRC1Q9BTT6 524 aa16.34■□□□□ 0.21
CHD4-210ENST00000544040 NPC1L1Q9UHC9 1359 aa16.34■□□□□ 0.21
CHD4-210ENST00000544040 CACNB3P54284 484 aa16.34■□□□□ 0.21
CHD4-210ENST00000544040 BCAR1P56945 870 aa16.34■□□□□ 0.21
CHD4-210ENST00000544040 STXBP2Q15833 593 aa16.34■□□□□ 0.21
CHD4-210ENST00000544040 CLEC4FQ8N1N0 589 aa16.34■□□□□ 0.21
CHD4-210ENST00000544040 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.34■□□□□ 0.21
CHD4-210ENST00000544040 ZNF473Q8WTR7 871 aaKnown RBP16.34■□□□□ 0.21
CHD4-210ENST00000544040 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.34■□□□□ 0.21
CHD4-210ENST00000544040 DENND3A2RUS2 1198 aa16.34■□□□□ 0.21
CHD4-210ENST00000544040 USP17L15C9J2P7 530 aa16.34■□□□□ 0.21
CHD4-210ENST00000544040 USP17L13C9JLJ4 530 aa16.34■□□□□ 0.21
CHD4-210ENST00000544040 USP17L11C9JVI0 530 aa16.34■□□□□ 0.21
CHD4-210ENST00000544040 USP17L18D6R9N7 530 aa16.34■□□□□ 0.21
CHD4-210ENST00000544040 USP17L22D6RA61 530 aa16.34■□□□□ 0.21
CHD4-210ENST00000544040 USP17L17D6RBQ6 530 aa16.34■□□□□ 0.21
CHD4-210ENST00000544040 USP17L19D6RCP7 530 aa16.34■□□□□ 0.21
CHD4-210ENST00000544040 USP17L20D6RJB6 530 aa16.34■□□□□ 0.21
CHD4-210ENST00000544040 ASAP2O43150 1006 aa16.34■□□□□ 0.21
CHD4-210ENST00000544040 KCNA3P22001 575 aa16.34■□□□□ 0.21
CHD4-210ENST00000544040 NFKBIAP25963 317 aa16.34■□□□□ 0.21
CHD4-210ENST00000544040 LRRC74AQ0VAA2 488 aa16.34■□□□□ 0.21
CHD4-210ENST00000544040 USP17L24Q0WX57 530 aa16.34■□□□□ 0.21
CHD4-210ENST00000544040 USP17L6PQ6QN14 398 aa16.34■□□□□ 0.21
CHD4-210ENST00000544040 C11orf74Q86VG3 221 aa16.34■□□□□ 0.21
CHD4-210ENST00000544040 PP2D1A8MPX8 630 aa16.34■□□□□ 0.21
CHD4-210ENST00000544040 ARIH2O95376 493 aa16.34■□□□□ 0.21
CHD4-210ENST00000544040 UBTFL6P0CB48 400 aaPredicted RBP16.34■□□□□ 0.21
CHD4-210ENST00000544040 FAM102AQ5T9C2 384 aaPredicted RBP16.34■□□□□ 0.21
CHD4-210ENST00000544040 WDR48Q8TAF3 677 aa16.34■□□□□ 0.21
CHD4-210ENST00000544040 COG1Q8WTW3 980 aa16.34■□□□□ 0.21
CHD4-210ENST00000544040 SPON2Q9BUD6 331 aa16.34■□□□□ 0.21
CHD4-210ENST00000544040 TRABDQ9H4I3 376 aa16.34■□□□□ 0.21
CHD4-210ENST00000544040 TSC22D4Q9Y3Q8 395 aa16.34■□□□□ 0.21
CHD4-210ENST00000544040 MLH3Q9UHC1 1453 aa16.34■□□□□ 0.21
CHD4-210ENST00000544040 NBNO60934 754 aa16.33■□□□□ 0.21
CHD4-210ENST00000544040 TOB2Q14106 344 aaPredicted RBP16.33■□□□□ 0.21
CHD4-210ENST00000544040 MTF1Q14872 753 aa16.33■□□□□ 0.21
CHD4-210ENST00000544040 CCDC142Q17RM4 750 aa16.33■□□□□ 0.21
CHD4-210ENST00000544040 DDX42Q86XP3 938 aaKnown RBP eCLIP16.33■□□□□ 0.21
CHD4-210ENST00000544040 GLYCTKQ8IVS8 523 aa16.33■□□□□ 0.21
CHD4-210ENST00000544040 TBX22Q9Y458 520 aa16.33■□□□□ 0.21
CHD4-210ENST00000544040 TTC26A0AVF1 554 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms