RNA–Protein interactions for RNA: ENST00000543988.1

OTUB1-212, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 1 (best) BASIC

Gene OTUB1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-212ENST00000543988 OFD1O75665 1012 aa23.99■■□□□ 1.43
OTUB1-212ENST00000543988 LAG3P18627 525 aa23.99■■□□□ 1.43
OTUB1-212ENST00000543988 ZNF131P52739 623 aa23.99■■□□□ 1.43
OTUB1-212ENST00000543988 GIT2Q14161 759 aa23.99■■□□□ 1.43
OTUB1-212ENST00000543988 EEF1DP3Q658K8 133 aa23.99■■□□□ 1.43
OTUB1-212ENST00000543988 KLHL23Q8NBE8 558 aa23.99■■□□□ 1.43
OTUB1-212ENST00000543988 TMEM161BQ8NDZ6 487 aa23.99■■□□□ 1.43
OTUB1-212ENST00000543988 CNNM3Q8NE01 707 aa23.99■■□□□ 1.43
OTUB1-212ENST00000543988 NTPCRQ9BSD7 190 aaKnown RBP23.99■■□□□ 1.43
OTUB1-212ENST00000543988 APOL6Q9BWW8 343 aa23.99■■□□□ 1.43
OTUB1-212ENST00000543988 RBM19Q9Y4C8 960 aaKnown RBP23.99■■□□□ 1.43
OTUB1-212ENST00000543988 RALGAPA2Q2PPJ7 1873 aa23.98■■□□□ 1.43
OTUB1-212ENST00000543988 FNDC1Q4ZHG4 1894 aaPredicted RBP23.98■■□□□ 1.43
OTUB1-212ENST00000543988 PRRC2BQ5JSZ5 2229 aaKnown RBP23.98■■□□□ 1.43
OTUB1-212ENST00000543988 TBCAO75347 108 aaKnown RBP23.98■■□□□ 1.43
OTUB1-212ENST00000543988 FAM13AO94988 1023 aa23.98■■□□□ 1.43
OTUB1-212ENST00000543988 ITGB1P05556 798 aa23.98■■□□□ 1.43
OTUB1-212ENST00000543988 ITGA4P13612 1032 aa23.98■■□□□ 1.43
OTUB1-212ENST00000543988 PBX3P40426 434 aa23.98■■□□□ 1.43
OTUB1-212ENST00000543988 AFF1P51825 1210 aaKnown RBP23.98■■□□□ 1.43
OTUB1-212ENST00000543988 LEO1Q8WVC0 666 aaPredicted RBP23.98■■□□□ 1.43
OTUB1-212ENST00000543988 RSPH1Q8WYR4 309 aa23.98■■□□□ 1.43
OTUB1-212ENST00000543988 P2RX5Q93086 422 aa23.98■■□□□ 1.43
OTUB1-212ENST00000543988 MRPL38Q96DV4 380 aaKnown RBP23.98■■□□□ 1.43
OTUB1-212ENST00000543988 TMEM134Q9H6X4 195 aa23.98■■□□□ 1.43
OTUB1-212ENST00000543988 ALG13Q9NP73 1137 aaKnown RBP23.98■■□□□ 1.43
OTUB1-212ENST00000543988 AAASQ9NRG9 546 aa23.98■■□□□ 1.43
OTUB1-212ENST00000543988 TBC1D13Q9NVG8 400 aa23.98■■□□□ 1.43
OTUB1-212ENST00000543988 LMCD1Q9NZU5 365 aa23.98■■□□□ 1.43
OTUB1-212ENST00000543988 LARSQ9P2J5 1176 aaKnown RBP23.98■■□□□ 1.43
OTUB1-212ENST00000543988 PCDHB12Q9Y5F1 795 aa23.98■■□□□ 1.43
OTUB1-212ENST00000543988 MYMKA6NI61 221 aa23.97■■□□□ 1.43
OTUB1-212ENST00000543988 MAPTP10636 758 aaKnown RBP23.97■■□□□ 1.43
OTUB1-212ENST00000543988 SMTNP53814 917 aa23.97■■□□□ 1.43
OTUB1-212ENST00000543988 KRT85P78386 507 aa23.97■■□□□ 1.43
OTUB1-212ENST00000543988 PTPROQ16827 1216 aa23.97■■□□□ 1.43
OTUB1-212ENST00000543988 ATF7IP2Q5U623 682 aa23.97■■□□□ 1.43
OTUB1-212ENST00000543988 SV2BQ7L1I2 683 aa23.97■■□□□ 1.43
OTUB1-212ENST00000543988 ZHX3Q9H4I2 956 aa23.97■■□□□ 1.43
OTUB1-212ENST00000543988 PARVGQ9HBI0 331 aa23.97■■□□□ 1.43
OTUB1-212ENST00000543988 PLAGL2Q9UPG8 496 aa23.97■■□□□ 1.43
OTUB1-212ENST00000543988 NLRC5Q86WI3 1866 aa23.96■■□□□ 1.43
OTUB1-212ENST00000543988 KIAA1671Q9BY89 1806 aa23.96■■□□□ 1.43
OTUB1-212ENST00000543988 B4GALT3O60512 393 aa23.96■■□□□ 1.43
OTUB1-212ENST00000543988 MLH1P40692 756 aa23.96■■□□□ 1.43
OTUB1-212ENST00000543988 NCKAP1LP55160 1127 aa23.96■■□□□ 1.43
OTUB1-212ENST00000543988 E2F4Q16254 413 aa23.96■■□□□ 1.43
OTUB1-212ENST00000543988 KCNT2Q6UVM3 1135 aa23.96■■□□□ 1.43
OTUB1-212ENST00000543988 DYMQ7RTS9 669 aa23.96■■□□□ 1.43
OTUB1-212ENST00000543988 HACE1Q8IYU2 909 aa23.96■■□□□ 1.43
OTUB1-212ENST00000543988 MYCT1Q8N699 235 aa23.96■■□□□ 1.43
OTUB1-212ENST00000543988 URGCPQ8TCY9 931 aa23.96■■□□□ 1.43
OTUB1-212ENST00000543988 ZNF558Q96NG5 402 aa23.96■■□□□ 1.43
OTUB1-212ENST00000543988 GAD1Q99259 594 aa23.96■■□□□ 1.43
OTUB1-212ENST00000543988 MRPL4Q9BYD3 311 aaKnown RBP23.96■■□□□ 1.43
OTUB1-212ENST00000543988 ATP6V1DQ9Y5K8 247 aa23.96■■□□□ 1.43
OTUB1-212ENST00000543988 FGF18O76093 207 aa23.95■■□□□ 1.42
OTUB1-212ENST00000543988 CSPG5O95196 566 aa23.95■■□□□ 1.42
OTUB1-212ENST00000543988 AKAP5P24588 427 aa23.95■■□□□ 1.42
OTUB1-212ENST00000543988 DNAJB1P25685 340 aa23.95■■□□□ 1.42
OTUB1-212ENST00000543988 RESP18Q5W5W9 173 aa23.95■■□□□ 1.42
OTUB1-212ENST00000543988 THNSL1Q8IYQ7 743 aa23.95■■□□□ 1.42
OTUB1-212ENST00000543988 DDX12PQ92771 950 aa23.95■■□□□ 1.42
OTUB1-212ENST00000543988 SPATA32Q96LK8 384 aa23.95■■□□□ 1.42
OTUB1-212ENST00000543988 ZFP42Q96MM3 310 aa23.95■■□□□ 1.42
OTUB1-212ENST00000543988 ACO2Q99798 780 aaKnown RBP23.95■■□□□ 1.42
OTUB1-212ENST00000543988 ADPGKQ9BRR6 497 aa23.95■■□□□ 1.42
OTUB1-212ENST00000543988 TARS2Q9BW92 718 aaKnown RBP23.95■■□□□ 1.42
OTUB1-212ENST00000543988 LMAN2LQ9H0V9 348 aa23.95■■□□□ 1.42
OTUB1-212ENST00000543988 UBN1Q9NPG3 1134 aa23.95■■□□□ 1.42
OTUB1-212ENST00000543988 KCNG1Q9UIX4 513 aa23.95■■□□□ 1.42
OTUB1-212ENST00000543988 TNFSF13BQ9Y275 285 aa23.95■■□□□ 1.42
OTUB1-212ENST00000543988 ARL5CA6NH57 179 aa23.94■■□□□ 1.42
OTUB1-212ENST00000543988 INPPL1O15357 1258 aa23.94■■□□□ 1.42
OTUB1-212ENST00000543988 ZC3H11AO75152 810 aaKnown RBP eCLIP23.94■■□□□ 1.42
OTUB1-212ENST00000543988 POMCP01189 267 aa23.94■■□□□ 1.42
OTUB1-212ENST00000543988 RNASELQ05823 741 aaKnown RBP23.94■■□□□ 1.42
OTUB1-212ENST00000543988 CAMK1Q14012 370 aa23.94■■□□□ 1.42
OTUB1-212ENST00000543988 CSPP1Q1MSJ5 1256 aa23.94■■□□□ 1.42
OTUB1-212ENST00000543988 DCAF4L1Q3SXM0 396 aa23.94■■□□□ 1.42
OTUB1-212ENST00000543988 SPPL3Q8TCT6 385 aa23.94■■□□□ 1.42
OTUB1-212ENST00000543988 DHX58Q96C10 678 aa23.94■■□□□ 1.42
OTUB1-212ENST00000543988 FIZ1Q96SL8 496 aa23.94■■□□□ 1.42
OTUB1-212ENST00000543988 GBP3Q9H0R5 595 aa23.94■■□□□ 1.42
OTUB1-212ENST00000543988 GIT1Q9Y2X7 761 aa23.94■■□□□ 1.42
OTUB1-212ENST00000543988 K7ENM7 598 aa23.93■■□□□ 1.42
OTUB1-212ENST00000543988 SCNN1GP51170 649 aa23.93■■□□□ 1.42
OTUB1-212ENST00000543988 BCAR1P56945 870 aa23.93■■□□□ 1.42
OTUB1-212ENST00000543988 NUCB2P80303 420 aa23.93■■□□□ 1.42
OTUB1-212ENST00000543988 STRN3Q13033 797 aa23.93■■□□□ 1.42
OTUB1-212ENST00000543988 TIGD5Q53EQ6 642 aa23.93■■□□□ 1.42
OTUB1-212ENST00000543988 HAUS6Q7Z4H7 955 aa23.93■■□□□ 1.42
OTUB1-212ENST00000543988 ZNF280BQ86YH2 543 aa23.93■■□□□ 1.42
OTUB1-212ENST00000543988 DNAJC19Q96DA6 116 aa23.93■■□□□ 1.42
OTUB1-212ENST00000543988 CDT1Q9H211 546 aa23.93■■□□□ 1.42
OTUB1-212ENST00000543988 NRDE2Q9H7Z3 1164 aa23.93■■□□□ 1.42
OTUB1-212ENST00000543988 PTPRHQ9HD43 1115 aa23.93■■□□□ 1.42
OTUB1-212ENST00000543988 PRDM6Q9NQX0 595 aa23.93■■□□□ 1.42
OTUB1-212ENST00000543988 PARP2Q9UGN5 583 aa23.93■■□□□ 1.42
OTUB1-212ENST00000543988 PRUNE2Q8WUY3 3088 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms