RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 SEC63Q9UGP8 760 aaKnown RBP13.57□□□□□ -0.24
SMG8-202ENST00000543872 PHTF1Q9UMS5 762 aa13.57□□□□□ -0.24
SMG8-202ENST00000543872 NIP7Q9Y221 180 aaKnown RBP eCLIP13.57□□□□□ -0.24
SMG8-202ENST00000543872 A0A0A6YYK5 440 aaPredicted RBP13.56□□□□□ -0.24
SMG8-202ENST00000543872 TPD52L2O43399 206 aaKnown RBP13.56□□□□□ -0.24
SMG8-202ENST00000543872 FGRP09769 529 aa13.56□□□□□ -0.24
SMG8-202ENST00000543872 T-ENOLP0DO92 83 aa13.56□□□□□ -0.24
SMG8-202ENST00000543872 TMED2Q15363 201 aa13.56□□□□□ -0.24
SMG8-202ENST00000543872 TNFAIP8L3Q5GJ75 292 aa13.56□□□□□ -0.24
SMG8-202ENST00000543872 EPM2AIP1Q7L775 607 aaPredicted RBP13.56□□□□□ -0.24
SMG8-202ENST00000543872 ZNF384Q8TF68 577 aa13.56□□□□□ -0.24
SMG8-202ENST00000543872 SERPINB12Q96P63 405 aa13.56□□□□□ -0.24
SMG8-202ENST00000543872 GSTTP1A0A1W2PQM5 241 aa13.56□□□□□ -0.24
SMG8-202ENST00000543872 RBM47A0AV96 593 aaKnown RBP13.56□□□□□ -0.24
SMG8-202ENST00000543872 PCP11498 1178 aaKnown RBP13.56□□□□□ -0.24
SMG8-202ENST00000543872 VCAM1P19320 739 aa13.56□□□□□ -0.24
SMG8-202ENST00000543872 MARK3P27448 753 aa13.56□□□□□ -0.24
SMG8-202ENST00000543872 CASP4P49662 377 aa13.56□□□□□ -0.24
SMG8-202ENST00000543872 TAF1BQ53T94 588 aaPredicted RBP13.56□□□□□ -0.24
SMG8-202ENST00000543872 WASHC2DQ5SRD0 308 aa13.56□□□□□ -0.24
SMG8-202ENST00000543872 PALB2Q86YC2 1186 aa13.56□□□□□ -0.24
SMG8-202ENST00000543872 ARL10Q8N8L6 244 aa13.56□□□□□ -0.24
SMG8-202ENST00000543872 PPFIBP2Q8ND30 876 aa13.56□□□□□ -0.24
SMG8-202ENST00000543872 FBXO41Q8TF61 875 aa13.56□□□□□ -0.24
SMG8-202ENST00000543872 C1orf54Q8WWF1 131 aa13.56□□□□□ -0.24
SMG8-202ENST00000543872 FAM136AQ96C01 138 aa13.56□□□□□ -0.24
SMG8-202ENST00000543872 PIGSQ96S52 555 aa13.56□□□□□ -0.24
SMG8-202ENST00000543872 TMOD3Q9NYL9 352 aa13.56□□□□□ -0.24
SMG8-202ENST00000543872 ERVV-2B6SEH9 535 aa13.56□□□□□ -0.24
SMG8-202ENST00000543872 RASA4BC9J798 803 aa13.56□□□□□ -0.24
SMG8-202ENST00000543872 RASA4O43374 803 aa13.56□□□□□ -0.24
SMG8-202ENST00000543872 CASP5P51878 434 aa13.56□□□□□ -0.24
SMG8-202ENST00000543872 MKRN3Q13064 507 aaKnown RBP13.56□□□□□ -0.24
SMG8-202ENST00000543872 CERKLQ49MI3 558 aaPredicted RBP13.56□□□□□ -0.24
SMG8-202ENST00000543872 SEL1L2Q5TEA6 688 aa13.56□□□□□ -0.24
SMG8-202ENST00000543872 APLFQ8IW19 511 aaPredicted RBP13.56□□□□□ -0.24
SMG8-202ENST00000543872 COA7Q96BR5 231 aa13.56□□□□□ -0.24
SMG8-202ENST00000543872 DYDC2Q96IM9 177 aa13.56□□□□□ -0.24
SMG8-202ENST00000543872 DCTN4Q9UJW0 460 aa13.56□□□□□ -0.24
SMG8-202ENST00000543872 COG5Q9UP83 839 aa13.56□□□□□ -0.24
SMG8-202ENST00000543872 NAALADL1Q9UQQ1 740 aa13.56□□□□□ -0.24
SMG8-202ENST00000543872 PASKQ96RG2 1323 aa13.55□□□□□ -0.24
SMG8-202ENST00000543872 TOM1O60784 492 aa13.55□□□□□ -0.24
SMG8-202ENST00000543872 BAG3O95817 575 aa13.55□□□□□ -0.24
SMG8-202ENST00000543872 PRKCIP41743 596 aa13.55□□□□□ -0.24
SMG8-202ENST00000543872 NPEPPSP55786 919 aa13.55□□□□□ -0.24
SMG8-202ENST00000543872 PPATQ06203 517 aa13.55□□□□□ -0.24
SMG8-202ENST00000543872 MCL1Q07820 350 aa13.55□□□□□ -0.24
SMG8-202ENST00000543872 ZNF444Q8N0Y2 327 aaPredicted RBP13.55□□□□□ -0.24
SMG8-202ENST00000543872 ENDOVQ8N8Q3 282 aaKnown RBP13.55□□□□□ -0.24
SMG8-202ENST00000543872 NRG4Q8WWG1 115 aa13.55□□□□□ -0.24
SMG8-202ENST00000543872 BCS1LQ9Y276 419 aa13.55□□□□□ -0.24
SMG8-202ENST00000543872 COILP38432 576 aaPredicted RBP13.55□□□□□ -0.24
SMG8-202ENST00000543872 CDR2Q01850 454 aa13.55□□□□□ -0.24
SMG8-202ENST00000543872 CPNE8Q86YQ8 564 aa13.55□□□□□ -0.24
SMG8-202ENST00000543872 SCYL3Q8IZE3 742 aa13.55□□□□□ -0.24
SMG8-202ENST00000543872 UBL4BQ8N7F7 174 aa13.55□□□□□ -0.24
SMG8-202ENST00000543872 C9orf72Q96LT7 481 aa13.55□□□□□ -0.24
SMG8-202ENST00000543872 MTMR9Q96QG7 549 aa13.55□□□□□ -0.24
SMG8-202ENST00000543872 DIS3Q9Y2L1 958 aaKnown RBP13.55□□□□□ -0.24
SMG8-202ENST00000543872 LRRN2O75325 713 aa13.55□□□□□ -0.24
SMG8-202ENST00000543872 TJP3O95049 919 aa13.55□□□□□ -0.24
SMG8-202ENST00000543872 CETPP11597 493 aa13.55□□□□□ -0.24
SMG8-202ENST00000543872 WDR4P57081 412 aaKnown RBP13.55□□□□□ -0.24
SMG8-202ENST00000543872 KPNB1Q14974 876 aaKnown RBP13.55□□□□□ -0.24
SMG8-202ENST00000543872 CYP4F22Q6NT55 531 aa13.55□□□□□ -0.24
SMG8-202ENST00000543872 TRMT10CQ7L0Y3 403 aaKnown RBP13.55□□□□□ -0.24
SMG8-202ENST00000543872 HS2ST1Q7LGA3 356 aa13.55□□□□□ -0.24
SMG8-202ENST00000543872 ART4Q93070 314 aa13.55□□□□□ -0.24
SMG8-202ENST00000543872 GRAMD1AQ96CP6 724 aa13.55□□□□□ -0.24
SMG8-202ENST00000543872 OPTNQ96CV9 577 aa13.55□□□□□ -0.24
SMG8-202ENST00000543872 TMEM47Q9BQJ4 181 aa13.55□□□□□ -0.24
SMG8-202ENST00000543872 KCTD10Q9H3F6 313 aa13.55□□□□□ -0.24
SMG8-202ENST00000543872 PREBQ9HCU5 417 aa13.55□□□□□ -0.24
SMG8-202ENST00000543872 ZFP69BQ9UJL9 534 aa13.55□□□□□ -0.24
SMG8-202ENST00000543872 ADAMTS7Q9UKP4 1686 aa13.54□□□□□ -0.24
SMG8-202ENST00000543872 WDR91A4D1P6 747 aa13.54□□□□□ -0.24
SMG8-202ENST00000543872 AKAP3O75969 853 aa13.54□□□□□ -0.24
SMG8-202ENST00000543872 TTLL1O95922 423 aa13.54□□□□□ -0.24
SMG8-202ENST00000543872 PLA2G4BP0C869 781 aa13.54□□□□□ -0.24
SMG8-202ENST00000543872 PYGMP11217 842 aa13.54□□□□□ -0.24
SMG8-202ENST00000543872 DRAP1Q14919 205 aaPredicted RBP13.54□□□□□ -0.24
SMG8-202ENST00000543872 ZRSR2Q15696 482 aaKnown RBP13.54□□□□□ -0.24
SMG8-202ENST00000543872 CAPN12Q6ZSI9 719 aa13.54□□□□□ -0.24
SMG8-202ENST00000543872 MTDHQ86UE4 582 aaKnown RBP13.54□□□□□ -0.24
SMG8-202ENST00000543872 TRAPPC9Q96Q05 1148 aa13.54□□□□□ -0.24
SMG8-202ENST00000543872 UBN1Q9NPG3 1134 aa13.54□□□□□ -0.24
SMG8-202ENST00000543872 MTUS1Q9ULD2 1270 aa13.54□□□□□ -0.24
SMG8-202ENST00000543872 USP20Q9Y2K6 914 aa13.54□□□□□ -0.24
SMG8-202ENST00000543872 MAGEA13PA6NCF6 341 aa13.54□□□□□ -0.24
SMG8-202ENST00000543872 GSTA2P09210 222 aa13.54□□□□□ -0.24
SMG8-202ENST00000543872 TMEM253P0C7T8 217 aa13.54□□□□□ -0.24
SMG8-202ENST00000543872 LMNB1P20700 586 aa13.54□□□□□ -0.24
SMG8-202ENST00000543872 MECOMQ03112 1051 aa13.54□□□□□ -0.24
SMG8-202ENST00000543872 ZNF746Q6NUN9 644 aaPredicted RBP13.54□□□□□ -0.24
SMG8-202ENST00000543872 DGKHQ86XP1 1220 aa13.54□□□□□ -0.24
SMG8-202ENST00000543872 VPS52Q8N1B4 723 aa13.54□□□□□ -0.24
SMG8-202ENST00000543872 INPP5DQ92835 1189 aa13.54□□□□□ -0.24
SMG8-202ENST00000543872 STMN2Q93045 179 aa13.54□□□□□ -0.24
SMG8-202ENST00000543872 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms