RNA–Protein interactions for RNA: ENST00000543755.1

CD4-211, Transcript of CD4 molecule, humanhuman

TSL 4

Gene CD4, Length 494 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-211ENST00000543755 ZNF280BQ86YH2 543 aa9.89□□□□□ -0.83
CD4-211ENST00000543755 UBL7Q96S82 380 aaPredicted RBP9.89□□□□□ -0.83
CD4-211ENST00000543755 CLMPQ9H6B4 373 aa9.89□□□□□ -0.83
CD4-211ENST00000543755 JADE2Q9NQC1 790 aa9.89□□□□□ -0.83
CD4-211ENST00000543755 RAXQ9Y2V3 346 aa9.89□□□□□ -0.83
CD4-211ENST00000543755 PRG3Q9Y2Y8 225 aaPredicted RBP9.89□□□□□ -0.83
CD4-211ENST00000543755 PIAS3Q9Y6X2 628 aa9.89□□□□□ -0.83
CD4-211ENST00000543755 ZMYM6O95789 1325 aa9.88□□□□□ -0.83
CD4-211ENST00000543755 SPDYE3A6NKU9 549 aa9.88□□□□□ -0.83
CD4-211ENST00000543755 SHISA7A6NL88 538 aa9.88□□□□□ -0.83
CD4-211ENST00000543755 K7ESF4 209 aa9.88□□□□□ -0.83
CD4-211ENST00000543755 PIK3CDO00329 1044 aa9.88□□□□□ -0.83
CD4-211ENST00000543755 ZNF213O14771 459 aa9.88□□□□□ -0.83
CD4-211ENST00000543755 C22orf31O95567 290 aa9.88□□□□□ -0.83
CD4-211ENST00000543755 CHRNB1P11230 501 aa9.88□□□□□ -0.83
CD4-211ENST00000543755 DARSP14868 501 aaKnown RBP9.88□□□□□ -0.83
CD4-211ENST00000543755 HOXA6P31267 233 aa9.88□□□□□ -0.83
CD4-211ENST00000543755 KIF5BP33176 963 aa9.88□□□□□ -0.83
CD4-211ENST00000543755 OR1G1P47890 313 aa9.88□□□□□ -0.83
CD4-211ENST00000543755 CLCN3P51790 818 aa9.88□□□□□ -0.83
CD4-211ENST00000543755 DSG1Q02413 1049 aa9.88□□□□□ -0.83
CD4-211ENST00000543755 ELF2Q15723 593 aa9.88□□□□□ -0.83
CD4-211ENST00000543755 UAP1L1Q3KQV9 507 aa9.88□□□□□ -0.83
CD4-211ENST00000543755 PABPC1LQ4VXU2 614 aaKnown RBP9.88□□□□□ -0.83
CD4-211ENST00000543755 NPAS3Q8IXF0 933 aa9.88□□□□□ -0.83
CD4-211ENST00000543755 SIRT2Q8IXJ6 389 aa9.88□□□□□ -0.83
CD4-211ENST00000543755 ZNF687Q8N1G0 1237 aa9.88□□□□□ -0.83
CD4-211ENST00000543755 ENAHQ8N8S7 591 aaPredicted RBP9.88□□□□□ -0.83
CD4-211ENST00000543755 ITFG1Q8TB96 612 aa9.88□□□□□ -0.83
CD4-211ENST00000543755 FAM200AQ8TCP9 573 aa9.88□□□□□ -0.83
CD4-211ENST00000543755 NLRP7Q8WX94 980 aa9.88□□□□□ -0.83
CD4-211ENST00000543755 TRMT61BQ9BVS5 477 aaKnown RBP9.88□□□□□ -0.83
CD4-211ENST00000543755 CHMP4BQ9H444 224 aaKnown RBP9.88□□□□□ -0.83
CD4-211ENST00000543755 CCDC86Q9H6F5 360 aaKnown RBP9.88□□□□□ -0.83
CD4-211ENST00000543755 ZNF302Q9NR11 478 aa9.88□□□□□ -0.83
CD4-211ENST00000543755 HELLSQ9NRZ9 838 aa9.88□□□□□ -0.83
CD4-211ENST00000543755 FAM105AQ9NUU6 356 aa9.88□□□□□ -0.83
CD4-211ENST00000543755 GDE1Q9NZC3 331 aa9.88□□□□□ -0.83
CD4-211ENST00000543755 KCNH3Q9ULD8 1083 aa9.88□□□□□ -0.83
CD4-211ENST00000543755 MRPS23Q9Y3D9 190 aaKnown RBP9.88□□□□□ -0.83
CD4-211ENST00000543755 UBIAD1Q9Y5Z9 338 aa9.88□□□□□ -0.83
CD4-211ENST00000543755 TICRRQ7Z2Z1 1910 aa9.88□□□□□ -0.83
CD4-211ENST00000543755 NFASCO94856 1347 aa9.87□□□□□ -0.83
CD4-211ENST00000543755 NEDD4P46934 1319 aa9.87□□□□□ -0.83
CD4-211ENST00000543755 TTC41PQ6P2S7 1318 aa9.87□□□□□ -0.83
CD4-211ENST00000543755 SPAARA0A1B0GVQ0 90 aa9.87□□□□□ -0.83
CD4-211ENST00000543755 KHNYNO15037 678 aaKnown RBP9.87□□□□□ -0.83
CD4-211ENST00000543755 CCL16O15467 120 aa9.87□□□□□ -0.83
CD4-211ENST00000543755 AKAP3O75969 853 aa9.87□□□□□ -0.83
CD4-211ENST00000543755 DDHD2O94830 711 aa9.87□□□□□ -0.83
CD4-211ENST00000543755 CAVIN2O95810 425 aa9.87□□□□□ -0.83
CD4-211ENST00000543755 CAPNS1P04632 268 aa9.87□□□□□ -0.83
CD4-211ENST00000543755 C8AP07357 584 aa9.87□□□□□ -0.83
CD4-211ENST00000543755 MS4A1P11836 297 aa9.87□□□□□ -0.83
CD4-211ENST00000543755 FGFR4P22455 802 aa9.87□□□□□ -0.83
CD4-211ENST00000543755 SFPQP23246 707 aaKnown RBP eCLIP9.87□□□□□ -0.83
CD4-211ENST00000543755 CCNE1P24864 410 aa9.87□□□□□ -0.83
CD4-211ENST00000543755 CREB5Q02930 508 aa9.87□□□□□ -0.83
CD4-211ENST00000543755 PTGDRQ13258 359 aa9.87□□□□□ -0.83
CD4-211ENST00000543755 DGKKQ5KSL6 1271 aa9.87□□□□□ -0.83
CD4-211ENST00000543755 EFCAB12Q6NXP0 572 aa9.87□□□□□ -0.83
CD4-211ENST00000543755 MIS18BP1Q6P0N0 1132 aa9.87□□□□□ -0.83
CD4-211ENST00000543755 TAS1R1Q7RTX1 841 aa9.87□□□□□ -0.83
CD4-211ENST00000543755 TRMT1LQ7Z2T5 733 aaKnown RBP9.87□□□□□ -0.83
CD4-211ENST00000543755 TBC1D10CQ8IV04 446 aa9.87□□□□□ -0.83
CD4-211ENST00000543755 CHCHD4Q8N4Q1 142 aa9.87□□□□□ -0.83
CD4-211ENST00000543755 ING5Q8WYH8 240 aa9.87□□□□□ -0.83
CD4-211ENST00000543755 ELSPBP1Q96BH3 223 aa9.87□□□□□ -0.83
CD4-211ENST00000543755 CRELD1Q96HD1 420 aa9.87□□□□□ -0.83
CD4-211ENST00000543755 ZNF668Q96K58 619 aaPredicted RBP9.87□□□□□ -0.83
CD4-211ENST00000543755 TRAIPQ9BWF2 469 aa9.87□□□□□ -0.83
CD4-211ENST00000543755 APOL6Q9BWW8 343 aa9.87□□□□□ -0.83
CD4-211ENST00000543755 RIOX1Q9H6W3 641 aa9.87□□□□□ -0.83
CD4-211ENST00000543755 KCNH7Q9NS40 1196 aa9.87□□□□□ -0.83
CD4-211ENST00000543755 FNIP2Q9P278 1114 aa9.87□□□□□ -0.83
CD4-211ENST00000543755 TCEAL9Q9UHQ7 104 aa9.87□□□□□ -0.83
CD4-211ENST00000543755 MAD2L2Q9UI95 211 aa9.87□□□□□ -0.83
CD4-211ENST00000543755 PIN4Q9Y237 131 aaKnown RBP9.87□□□□□ -0.83
CD4-211ENST00000543755 KALRNO60229 2985 aa9.87□□□□□ -0.83
CD4-211ENST00000543755 USP9XQ93008 2570 aaPredicted RBP9.86□□□□□ -0.83
CD4-211ENST00000543755 CCDC163A0A0D9SF12 145 aa9.86□□□□□ -0.83
CD4-211ENST00000543755 PALM3A6NDB9 673 aaPredicted RBP9.86□□□□□ -0.83
CD4-211ENST00000543755 PYCARD-AS1I3L0S3 204 aa9.86□□□□□ -0.83
CD4-211ENST00000543755 TK2O00142 265 aa9.86□□□□□ -0.83
CD4-211ENST00000543755 RHOBTB1O94844 696 aa9.86□□□□□ -0.83
CD4-211ENST00000543755 POMCP01189 267 aa9.86□□□□□ -0.83
CD4-211ENST00000543755 HOXA9P31269 272 aa9.86□□□□□ -0.83
CD4-211ENST00000543755 SIM1P81133 766 aaPredicted RBP9.86□□□□□ -0.83
CD4-211ENST00000543755 CDC42EP1Q00587 391 aa9.86□□□□□ -0.83
CD4-211ENST00000543755 GAS6Q14393 721 aa9.86□□□□□ -0.83
CD4-211ENST00000543755 GRM2Q14416 872 aa9.86□□□□□ -0.83
CD4-211ENST00000543755 USP41Q3LFD5 358 aa9.86□□□□□ -0.83
CD4-211ENST00000543755 LILRA6Q6PI73 481 aa9.86□□□□□ -0.83
CD4-211ENST00000543755 GPR65Q8IYL9 337 aa9.86□□□□□ -0.83
CD4-211ENST00000543755 TMEFF1Q8IYR6 380 aa9.86□□□□□ -0.83
CD4-211ENST00000543755 PANK1Q8TE04 598 aa9.86□□□□□ -0.83
CD4-211ENST00000543755 PIBF1Q8WXW3 757 aa9.86□□□□□ -0.83
CD4-211ENST00000543755 MCRS1Q96EZ8 462 aa9.86□□□□□ -0.83
CD4-211ENST00000543755 MSANTD3Q96H12 275 aa9.86□□□□□ -0.83
CD4-211ENST00000543755 ZC3H10Q96K80 434 aaKnown RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms