RNA–Protein interactions for RNA: ENST00000543663.5

TUBGCP2-210, Transcript of tubulin gamma complex associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP2, Length 4,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP2-210ENST00000543663 ITKQ08881 620 aa13.82□□□□□ -0.2
TUBGCP2-210ENST00000543663 FOXD4Q12950 439 aaPredicted RBP13.82□□□□□ -0.2
TUBGCP2-210ENST00000543663 KYNUQ16719 465 aa13.82□□□□□ -0.2
TUBGCP2-210ENST00000543663 PCGF5Q86SE9 256 aa13.82□□□□□ -0.2
TUBGCP2-210ENST00000543663 TTLL6Q8N841 843 aa13.82□□□□□ -0.2
TUBGCP2-210ENST00000543663 CCDC124Q96CT7 223 aaKnown RBP13.82□□□□□ -0.2
TUBGCP2-210ENST00000543663 INTS2Q9H0H0 1204 aaKnown RBP13.82□□□□□ -0.2
TUBGCP2-210ENST00000543663 MX2P20592 715 aa13.82□□□□□ -0.2
TUBGCP2-210ENST00000543663 SNX16P57768 344 aa13.82□□□□□ -0.2
TUBGCP2-210ENST00000543663 BPIFB4P59827 614 aa13.82□□□□□ -0.2
TUBGCP2-210ENST00000543663 GPS1Q13098 491 aa13.82□□□□□ -0.2
TUBGCP2-210ENST00000543663 GADL1Q6ZQY3 521 aa13.82□□□□□ -0.2
TUBGCP2-210ENST00000543663 ELOA2Q8IYF1 753 aaPredicted RBP13.82□□□□□ -0.2
TUBGCP2-210ENST00000543663 PDIK1LQ8N165 341 aa13.82□□□□□ -0.2
TUBGCP2-210ENST00000543663 TMEM206Q9H813 350 aa13.82□□□□□ -0.2
TUBGCP2-210ENST00000543663 RSPH10B2B2RC85 870 aa13.82□□□□□ -0.2
TUBGCP2-210ENST00000543663 RSPH10BP0C881 870 aa13.82□□□□□ -0.2
TUBGCP2-210ENST00000543663 GRAMD1BQ3KR37 738 aa13.82□□□□□ -0.2
TUBGCP2-210ENST00000543663 CDAN1Q8IWY9 1227 aa13.82□□□□□ -0.2
TUBGCP2-210ENST00000543663 ZBED8Q8IZ13 594 aa13.82□□□□□ -0.2
TUBGCP2-210ENST00000543663 PPWD1Q96BP3 646 aaKnown RBP13.82□□□□□ -0.2
TUBGCP2-210ENST00000543663 CFAP57Q96MR6 1250 aa13.82□□□□□ -0.2
TUBGCP2-210ENST00000543663 INTS13Q9NVM9 706 aa13.82□□□□□ -0.2
TUBGCP2-210ENST00000543663 IPO5O00410 1097 aaKnown RBP13.81□□□□□ -0.2
TUBGCP2-210ENST00000543663 PSMD14O00487 310 aa13.81□□□□□ -0.2
TUBGCP2-210ENST00000543663 PPFIA2O75334 1257 aa13.81□□□□□ -0.2
TUBGCP2-210ENST00000543663 VAMP7P51809 220 aa13.81□□□□□ -0.2
TUBGCP2-210ENST00000543663 LRRC36Q1X8D7 754 aa13.81□□□□□ -0.2
TUBGCP2-210ENST00000543663 PARP9Q8IXQ6 854 aa13.81□□□□□ -0.2
TUBGCP2-210ENST00000543663 ANKS1AQ92625 1134 aa13.81□□□□□ -0.2
TUBGCP2-210ENST00000543663 ATP6V0A1Q93050 837 aa13.81□□□□□ -0.2
TUBGCP2-210ENST00000543663 SPDL1Q96EA4 605 aa13.81□□□□□ -0.2
TUBGCP2-210ENST00000543663 RMDN3Q96TC7 470 aa13.81□□□□□ -0.2
TUBGCP2-210ENST00000543663 LXNQ9BS40 222 aa13.81□□□□□ -0.2
TUBGCP2-210ENST00000543663 NOP53Q9NZM5 478 aaKnown RBP13.81□□□□□ -0.2
TUBGCP2-210ENST00000543663 SLC4A7Q9Y6M7 1214 aa13.81□□□□□ -0.2
TUBGCP2-210ENST00000543663 PALM3A6NDB9 673 aaPredicted RBP13.81□□□□□ -0.2
TUBGCP2-210ENST00000543663 ZNF233A6NK53 670 aa13.81□□□□□ -0.2
TUBGCP2-210ENST00000543663 WDR64B1ANS9 1081 aa13.81□□□□□ -0.2
TUBGCP2-210ENST00000543663 DIAPH2O60879 1101 aa13.81□□□□□ -0.2
TUBGCP2-210ENST00000543663 GSTA1P08263 222 aa13.81□□□□□ -0.2
TUBGCP2-210ENST00000543663 GSTA2P09210 222 aa13.81□□□□□ -0.2
TUBGCP2-210ENST00000543663 TMPRSS15P98073 1019 aa13.81□□□□□ -0.2
TUBGCP2-210ENST00000543663 MKRN3Q13064 507 aaKnown RBP13.81□□□□□ -0.2
TUBGCP2-210ENST00000543663 SPP2Q13103 211 aa13.81□□□□□ -0.2
TUBGCP2-210ENST00000543663 AP1ARQ63HQ0 302 aa13.81□□□□□ -0.2
TUBGCP2-210ENST00000543663 CERS5Q8N5B7 392 aa13.81□□□□□ -0.2
TUBGCP2-210ENST00000543663 MED10Q9BTT4 135 aa13.81□□□□□ -0.2
TUBGCP2-210ENST00000543663 ENO4A6NNW6 628 aa13.81□□□□□ -0.2
TUBGCP2-210ENST00000543663 PODXLO00592 558 aa13.81□□□□□ -0.2
TUBGCP2-210ENST00000543663 MCF2LO15068 1137 aa13.81□□□□□ -0.2
TUBGCP2-210ENST00000543663 GYG2O15488 501 aa13.81□□□□□ -0.2
TUBGCP2-210ENST00000543663 NOL3O60936 208 aaKnown RBP13.81□□□□□ -0.2
TUBGCP2-210ENST00000543663 CPP00450 1065 aa13.81□□□□□ -0.2
TUBGCP2-210ENST00000543663 HERVK_113P62684 666 aa13.81□□□□□ -0.2
TUBGCP2-210ENST00000543663 SLC29A2Q14542 456 aa13.81□□□□□ -0.2
TUBGCP2-210ENST00000543663 IL17AQ16552 155 aa13.81□□□□□ -0.2
TUBGCP2-210ENST00000543663 PPP4R3CPQ6ZMV5 832 aa13.81□□□□□ -0.2
TUBGCP2-210ENST00000543663 PPM1NQ8N819 430 aa13.81□□□□□ -0.2
TUBGCP2-210ENST00000543663 BBOF1Q8ND07 529 aa13.81□□□□□ -0.2
TUBGCP2-210ENST00000543663 CPA5Q8WXQ8 436 aa13.81□□□□□ -0.2
TUBGCP2-210ENST00000543663 TRIM4Q9C037 500 aa13.81□□□□□ -0.2
TUBGCP2-210ENST00000543663 CYP4F11Q9HBI6 524 aa13.81□□□□□ -0.2
TUBGCP2-210ENST00000543663 FGFR1OP2Q9NVK5 253 aa13.81□□□□□ -0.2
TUBGCP2-210ENST00000543663 CRYBG1Q9Y4K1 1723 aa13.81□□□□□ -0.2
TUBGCP2-210ENST00000543663 SPATA31A6Q5VVP1 1343 aa13.81□□□□□ -0.2
TUBGCP2-210ENST00000543663 TARSL2A2RTX5 802 aaKnown RBP13.81□□□□□ -0.2
TUBGCP2-210ENST00000543663 GABPAQ06546 454 aa13.81□□□□□ -0.2
TUBGCP2-210ENST00000543663 TMEM179Q6ZVK1 233 aa13.81□□□□□ -0.2
TUBGCP2-210ENST00000543663 MCF2L2Q86YR7 1114 aa13.81□□□□□ -0.2
TUBGCP2-210ENST00000543663 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.81□□□□□ -0.25e-6■■□□□ 11.5
TUBGCP2-210ENST00000543663 BTBD6Q96KE9 485 aa13.81□□□□□ -0.2
TUBGCP2-210ENST00000543663 MSTO1Q9BUK6 570 aa13.81□□□□□ -0.2
TUBGCP2-210ENST00000543663 EPN3Q9H201 632 aa13.81□□□□□ -0.2
TUBGCP2-210ENST00000543663 MRPL47Q9HD33 250 aaKnown RBP13.81□□□□□ -0.2
TUBGCP2-210ENST00000543663 ARHGAP20Q9P2F6 1191 aa13.81□□□□□ -0.2
TUBGCP2-210ENST00000543663 GIPC1O14908 333 aa13.8□□□□□ -0.2
TUBGCP2-210ENST00000543663 GLI1P08151 1106 aa13.8□□□□□ -0.2
TUBGCP2-210ENST00000543663 NAALADL2Q58DX5 795 aa13.8□□□□□ -0.2
TUBGCP2-210ENST00000543663 FAM47CQ5HY64 1035 aa13.8□□□□□ -0.2
TUBGCP2-210ENST00000543663 RFFLQ8WZ73 363 aa13.8□□□□□ -0.2
TUBGCP2-210ENST00000543663 LRRC37BQ96QE4 947 aa13.8□□□□□ -0.2
TUBGCP2-210ENST00000543663 SPZ1Q9BXG8 430 aa13.8□□□□□ -0.2
TUBGCP2-210ENST00000543663 SPATS2LQ9NUQ6 558 aaKnown RBP13.8□□□□□ -0.2
TUBGCP2-210ENST00000543663 MARCOQ9UEW3 520 aaPredicted RBP13.8□□□□□ -0.2
TUBGCP2-210ENST00000543663 CASP4P49662 377 aa13.8□□□□□ -0.2
TUBGCP2-210ENST00000543663 TAF12Q16514 161 aa13.8□□□□□ -0.2
TUBGCP2-210ENST00000543663 ERICH1Q86X53 443 aa13.8□□□□□ -0.2
TUBGCP2-210ENST00000543663 GBP7Q8N8V2 638 aaPredicted RBP13.8□□□□□ -0.2
TUBGCP2-210ENST00000543663 ECT2Q9H8V3 914 aa13.8□□□□□ -0.2
TUBGCP2-210ENST00000543663 PLAGL2Q9UPG8 496 aa13.8□□□□□ -0.2
TUBGCP2-210ENST00000543663 TLR3O15455 904 aaKnown RBP13.8□□□□□ -0.2
TUBGCP2-210ENST00000543663 HSPA6P17066 643 aa13.8□□□□□ -0.2
TUBGCP2-210ENST00000543663 PSMA2P25787 234 aa13.8□□□□□ -0.2
TUBGCP2-210ENST00000543663 KRT17Q04695 432 aa13.8□□□□□ -0.2
TUBGCP2-210ENST00000543663 MTMR1Q13613 665 aa13.8□□□□□ -0.2
TUBGCP2-210ENST00000543663 ARHGAP27Q6ZUM4 889 aa13.8□□□□□ -0.2
TUBGCP2-210ENST00000543663 PI4K2AQ9BTU6 479 aa13.8□□□□□ -0.2
TUBGCP2-210ENST00000543663 AKT3Q9Y243 479 aa13.8□□□□□ -0.2
TUBGCP2-210ENST00000543663 SYNGAP1Q96PV0 1343 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms