RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-222ENST00000543627 MRPL38Q96DV4 380 aaKnown RBP12.17□□□□□ -0.46
DDB1-222ENST00000543627 BICD1Q96G01 975 aa12.17□□□□□ -0.46
DDB1-222ENST00000543627 CHAMP1Q96JM3 812 aa12.17□□□□□ -0.46
DDB1-222ENST00000543627 GAD1Q99259 594 aa12.17□□□□□ -0.46
DDB1-222ENST00000543627 REEP2Q9BRK0 252 aa12.17□□□□□ -0.46
DDB1-222ENST00000543627 PLVAPQ9BX97 442 aa12.17□□□□□ -0.46
DDB1-222ENST00000543627 MRPL9Q9BYD2 267 aaKnown RBP12.17□□□□□ -0.46
DDB1-222ENST00000543627 NFKBIZQ9BYH8 718 aa12.17□□□□□ -0.46
DDB1-222ENST00000543627 FZD8Q9H461 694 aa12.17□□□□□ -0.46
DDB1-222ENST00000543627 NXF3Q9H4D5 531 aaKnown RBP12.17□□□□□ -0.46
DDB1-222ENST00000543627 BLOC1S4Q9NUP1 217 aa12.17□□□□□ -0.46
DDB1-222ENST00000543627 SNTG2Q9NY99 539 aa12.17□□□□□ -0.46
DDB1-222ENST00000543627 CFAP45Q9UL16 551 aa12.17□□□□□ -0.46
DDB1-222ENST00000543627 GDAQ9Y2T3 454 aa12.17□□□□□ -0.46
DDB1-222ENST00000543627 A0A1B0GUA9 196 aa12.16□□□□□ -0.46
DDB1-222ENST00000543627 C5orf67F2Z3F1 127 aa12.16□□□□□ -0.46
DDB1-222ENST00000543627 ACKR2O00590 384 aa12.16□□□□□ -0.46
DDB1-222ENST00000543627 SLC26A4O43511 780 aa12.16□□□□□ -0.46
DDB1-222ENST00000543627 LINC00271P0C7V0 271 aa12.16□□□□□ -0.46
DDB1-222ENST00000543627 PLS3P13797 630 aa12.16□□□□□ -0.46
DDB1-222ENST00000543627 MLH1P40692 756 aa12.16□□□□□ -0.46
DDB1-222ENST00000543627 BCAR1P56945 870 aa12.16□□□□□ -0.46
DDB1-222ENST00000543627 KRT17Q04695 432 aa12.16□□□□□ -0.46
DDB1-222ENST00000543627 MAPK7Q13164 816 aa12.16□□□□□ -0.46
DDB1-222ENST00000543627 TCEAL5Q5H9L2 206 aa12.16□□□□□ -0.46
DDB1-222ENST00000543627 ATF7IP2Q5U623 682 aa12.16□□□□□ -0.46
DDB1-222ENST00000543627 CCDC73Q6ZRK6 1079 aa12.16□□□□□ -0.46
DDB1-222ENST00000543627 MRPL10Q7Z7H8 261 aaKnown RBP12.16□□□□□ -0.46
DDB1-222ENST00000543627 RBM23Q86U06 439 aaKnown RBP12.16□□□□□ -0.46
DDB1-222ENST00000543627 KCTD17Q8N5Z5 321 aa12.16□□□□□ -0.46
DDB1-222ENST00000543627 SPPL3Q8TCT6 385 aa12.16□□□□□ -0.46
DDB1-222ENST00000543627 STAMQ92783 540 aa12.16□□□□□ -0.46
DDB1-222ENST00000543627 DHX58Q96C10 678 aa12.16□□□□□ -0.46
DDB1-222ENST00000543627 CCDC51Q96ER9 411 aa12.16□□□□□ -0.46
DDB1-222ENST00000543627 PRIMPOLQ96LW4 560 aa12.16□□□□□ -0.46
DDB1-222ENST00000543627 ZFP42Q96MM3 310 aa12.16□□□□□ -0.46
DDB1-222ENST00000543627 RPS6KC1Q96S38 1066 aa12.16□□□□□ -0.46
DDB1-222ENST00000543627 TIPINQ9BVW5 301 aa12.16□□□□□ -0.46
DDB1-222ENST00000543627 TARS2Q9BW92 718 aaKnown RBP12.16□□□□□ -0.46
DDB1-222ENST00000543627 TRAIPQ9BWF2 469 aa12.16□□□□□ -0.46
DDB1-222ENST00000543627 PDZD7Q9H5P4 517 aa12.16□□□□□ -0.46
DDB1-222ENST00000543627 TBC1D13Q9NVG8 400 aa12.16□□□□□ -0.46
DDB1-222ENST00000543627 SPG21Q9NZD8 308 aa12.16□□□□□ -0.46
DDB1-222ENST00000543627 LMCD1Q9NZU5 365 aa12.16□□□□□ -0.46
DDB1-222ENST00000543627 LARSQ9P2J5 1176 aaKnown RBP12.16□□□□□ -0.46
DDB1-222ENST00000543627 PUF60Q9UHX1 559 aaKnown RBP12.16□□□□□ -0.46
DDB1-222ENST00000543627 PCDHGC5Q9Y5F6 944 aa12.16□□□□□ -0.46
DDB1-222ENST00000543627 PRRC2BQ5JSZ5 2229 aaKnown RBP12.15□□□□□ -0.46
DDB1-222ENST00000543627 FNDC1Q4ZHG4 1894 aaPredicted RBP12.15□□□□□ -0.46
DDB1-222ENST00000543627 NLRC5Q86WI3 1866 aa12.15□□□□□ -0.46
DDB1-222ENST00000543627 ARL5CA6NH57 179 aa12.15□□□□□ -0.46
DDB1-222ENST00000543627 K7ENM7 598 aa12.15□□□□□ -0.46
DDB1-222ENST00000543627 CUTAO60888 179 aa12.15□□□□□ -0.46
DDB1-222ENST00000543627 PPP6R2O75170 966 aa12.15□□□□□ -0.46
DDB1-222ENST00000543627 YEATS4O95619 227 aa12.15□□□□□ -0.46
DDB1-222ENST00000543627 ALDH2P05091 517 aa12.15□□□□□ -0.46
DDB1-222ENST00000543627 EDN1P05305 212 aa12.15□□□□□ -0.46
DDB1-222ENST00000543627 IDEP14735 1019 aa12.15□□□□□ -0.46
DDB1-222ENST00000543627 DNAJB1P25685 340 aa12.15□□□□□ -0.46
DDB1-222ENST00000543627 IRS1P35568 1242 aa12.15□□□□□ -0.46
DDB1-222ENST00000543627 OR1G1P47890 313 aa12.15□□□□□ -0.46
DDB1-222ENST00000543627 SCNN1GP51170 649 aa12.15□□□□□ -0.46
DDB1-222ENST00000543627 GIT2Q14161 759 aa12.15□□□□□ -0.46
DDB1-222ENST00000543627 FAM187BQ17R55 369 aa12.15□□□□□ -0.46
DDB1-222ENST00000543627 NT5DC1Q5TFE4 455 aa12.15□□□□□ -0.46
DDB1-222ENST00000543627 PLPP4Q5VZY2 271 aa12.15□□□□□ -0.46
DDB1-222ENST00000543627 EEF1DP3Q658K8 133 aa12.15□□□□□ -0.46
DDB1-222ENST00000543627 PPP4R3CPQ6ZMV5 832 aa12.15□□□□□ -0.46
DDB1-222ENST00000543627 TMC7Q7Z402 723 aa12.15□□□□□ -0.46
DDB1-222ENST00000543627 ZNF280BQ86YH2 543 aa12.15□□□□□ -0.46
DDB1-222ENST00000543627 TMEM87AQ8NBN3 555 aa12.15□□□□□ -0.46
DDB1-222ENST00000543627 KCNG4Q8TDN1 519 aa12.15□□□□□ -0.46
DDB1-222ENST00000543627 P2RX5Q93086 422 aa12.15□□□□□ -0.46
DDB1-222ENST00000543627 MRPL4Q9BYD3 311 aaKnown RBP12.15□□□□□ -0.46
DDB1-222ENST00000543627 CCDC113Q9H0I3 377 aa12.15□□□□□ -0.46
DDB1-222ENST00000543627 NSUN3Q9H649 340 aaKnown RBP12.15□□□□□ -0.46
DDB1-222ENST00000543627 NRDE2Q9H7Z3 1164 aa12.15□□□□□ -0.46
DDB1-222ENST00000543627 UBN1Q9NPG3 1134 aa12.15□□□□□ -0.46
DDB1-222ENST00000543627 ENTPD7Q9NQZ7 604 aa12.15□□□□□ -0.46
DDB1-222ENST00000543627 MIOSQ9NXC5 875 aa12.15□□□□□ -0.46
DDB1-222ENST00000543627 KCND2Q9NZV8 630 aa12.15□□□□□ -0.46
DDB1-222ENST00000543627 TBC1D7Q9P0N9 293 aa12.15□□□□□ -0.46
DDB1-222ENST00000543627 KANSL3Q9P2N6 904 aa12.15□□□□□ -0.46
DDB1-222ENST00000543627 ANKFY1Q9P2R3 1169 aa12.15□□□□□ -0.46
DDB1-222ENST00000543627 DNAJB4Q9UDY4 337 aa12.15□□□□□ -0.46
DDB1-222ENST00000543627 FAN1Q9Y2M0 1017 aa12.15□□□□□ -0.46
DDB1-222ENST00000543627 RBM19Q9Y4C8 960 aaKnown RBP12.15□□□□□ -0.46
DDB1-222ENST00000543627 PRUNE2Q8WUY3 3088 aa12.15□□□□□ -0.46
DDB1-222ENST00000543627 CNTNAP2Q9UHC6 1331 aa12.14□□□□□ -0.47
DDB1-222ENST00000543627 PER2O15055 1255 aa12.14□□□□□ -0.47
DDB1-222ENST00000543627 TRAK2O60296 914 aa12.14□□□□□ -0.47
DDB1-222ENST00000543627 DDHD2O94830 711 aa12.14□□□□□ -0.47
DDB1-222ENST00000543627 BRD1O95696 1058 aa12.14□□□□□ -0.47
DDB1-222ENST00000543627 POU3F3P20264 500 aaPredicted RBP12.14□□□□□ -0.47
DDB1-222ENST00000543627 NMT1P30419 496 aaKnown RBP12.14□□□□□ -0.47
DDB1-222ENST00000543627 TFF2Q03403 129 aa12.14□□□□□ -0.47
DDB1-222ENST00000543627 CSPP1Q1MSJ5 1256 aa12.14□□□□□ -0.47
DDB1-222ENST00000543627 ZNF568Q3ZCX4 644 aa12.14□□□□□ -0.47
DDB1-222ENST00000543627 TIGD5Q53EQ6 642 aa12.14□□□□□ -0.47
DDB1-222ENST00000543627 NAALADL2Q58DX5 795 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms