RNA–Protein interactions for RNA: ENST00000543239.1

CIT-212, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-212ENST00000543239 K7ERI5 159 aa17.91■□□□□ 0.46
CIT-212ENST00000543239 SPTLC2O15270 562 aa17.91■□□□□ 0.46
CIT-212ENST00000543239 NPTXRO95502 500 aa17.91■□□□□ 0.46
CIT-212ENST00000543239 PLS3P13797 630 aa17.91■□□□□ 0.46
CIT-212ENST00000543239 RAD51AP2Q09MP3 1159 aa17.91■□□□□ 0.46
CIT-212ENST00000543239 PKP1Q13835 747 aa17.91■□□□□ 0.46
CIT-212ENST00000543239 CAMK1Q14012 370 aa17.91■□□□□ 0.46
CIT-212ENST00000543239 TMEM132AQ24JP5 1023 aa17.91■□□□□ 0.46
CIT-212ENST00000543239 ARSHQ5FYA8 562 aa17.91■□□□□ 0.46
CIT-212ENST00000543239 SPECC1Q5M775 1068 aa17.91■□□□□ 0.46
CIT-212ENST00000543239 FOXD4L5Q5VV16 416 aaPredicted RBP17.91■□□□□ 0.46
CIT-212ENST00000543239 GPBP1Q86WP2 473 aa17.91■□□□□ 0.46
CIT-212ENST00000543239 POF1BQ8WVV4 589 aa17.91■□□□□ 0.46
CIT-212ENST00000543239 FOXD4L4Q8WXT5 416 aaPredicted RBP17.91■□□□□ 0.46
CIT-212ENST00000543239 ADPGKQ9BRR6 497 aa17.91■□□□□ 0.46
CIT-212ENST00000543239 PDZD7Q9H5P4 517 aa17.91■□□□□ 0.46
CIT-212ENST00000543239 SPG21Q9NZD8 308 aa17.91■□□□□ 0.46
CIT-212ENST00000543239 LARSQ9P2J5 1176 aaKnown RBP17.91■□□□□ 0.46
CIT-212ENST00000543239 GIT1Q9Y2X7 761 aa17.91■□□□□ 0.46
CIT-212ENST00000543239 TTLL13PA6NNM8 815 aa17.9■□□□□ 0.46
CIT-212ENST00000543239 EDN1P05305 212 aa17.9■□□□□ 0.46
CIT-212ENST00000543239 LIG1P18858 919 aa17.9■□□□□ 0.46
CIT-212ENST00000543239 DNAJB1P25685 340 aa17.9■□□□□ 0.46
CIT-212ENST00000543239 DDIT3P35638 169 aa17.9■□□□□ 0.46
CIT-212ENST00000543239 ALDH7A1P49419 539 aaKnown RBP17.9■□□□□ 0.46
CIT-212ENST00000543239 SMTNP53814 917 aa17.9■□□□□ 0.46
CIT-212ENST00000543239 RNASELQ05823 741 aaKnown RBP17.9■□□□□ 0.46
CIT-212ENST00000543239 BECN1Q14457 450 aa17.9■□□□□ 0.46
CIT-212ENST00000543239 MCM6Q14566 821 aa17.9■□□□□ 0.46
CIT-212ENST00000543239 CDR2LQ86X02 465 aaPredicted RBP17.9■□□□□ 0.46
CIT-212ENST00000543239 SLC39A11Q8N1S5 342 aa17.9■□□□□ 0.46
CIT-212ENST00000543239 MRPS27Q92552 414 aaKnown RBP17.9■□□□□ 0.46
CIT-212ENST00000543239 REEP2Q9BRK0 252 aa17.9■□□□□ 0.46
CIT-212ENST00000543239 NXF3Q9H4D5 531 aaKnown RBP17.9■□□□□ 0.46
CIT-212ENST00000543239 TFIP11Q9UBB9 837 aaKnown RBP17.9■□□□□ 0.46
CIT-212ENST00000543239 HES2Q9Y543 173 aa17.9■□□□□ 0.46
CIT-212ENST00000543239 PLXNA4Q9HCM2 1894 aa17.9■□□□□ 0.46
CIT-212ENST00000543239 UNC80Q8N2C7 3258 aa17.89■□□□□ 0.45
CIT-212ENST00000543239 ARL5CA6NH57 179 aa17.89■□□□□ 0.45
CIT-212ENST00000543239 SFI1A8K8P3 1242 aa17.89■□□□□ 0.45
CIT-212ENST00000543239 H0YCG3 227 aa17.89■□□□□ 0.45
CIT-212ENST00000543239 ZC3H11AO75152 810 aaKnown RBP eCLIP17.89■□□□□ 0.45
CIT-212ENST00000543239 SCP2P22307 547 aa17.89■□□□□ 0.45
CIT-212ENST00000543239 BCAR1P56945 870 aa17.89■□□□□ 0.45
CIT-212ENST00000543239 KRT17Q04695 432 aa17.89■□□□□ 0.45
CIT-212ENST00000543239 DHX8Q14562 1220 aaKnown RBP17.89■□□□□ 0.45
CIT-212ENST00000543239 AAK1Q2M2I8 961 aa17.89■□□□□ 0.45
CIT-212ENST00000543239 DCAF4L1Q3SXM0 396 aa17.89■□□□□ 0.45
CIT-212ENST00000543239 TCEAL5Q5H9L2 206 aa17.89■□□□□ 0.45
CIT-212ENST00000543239 ATF7IP2Q5U623 682 aa17.89■□□□□ 0.45
CIT-212ENST00000543239 PDE12Q6L8Q7 609 aaKnown RBP17.89■□□□□ 0.45
CIT-212ENST00000543239 APBB1IPQ7Z5R6 666 aaPredicted RBP17.89■□□□□ 0.45
CIT-212ENST00000543239 KCNN1Q92952 543 aa17.89■□□□□ 0.45
CIT-212ENST00000543239 HLA-CQ95604 372 aa17.89■□□□□ 0.45
CIT-212ENST00000543239 PPP2R3CQ969Q6 453 aa17.89■□□□□ 0.45
CIT-212ENST00000543239 RNF39Q9H2S5 420 aa17.89■□□□□ 0.45
CIT-212ENST00000543239 NRDE2Q9H7Z3 1164 aa17.89■□□□□ 0.45
CIT-212ENST00000543239 TLR9Q9NR96 1032 aa17.89■□□□□ 0.45
CIT-212ENST00000543239 PUF60Q9UHX1 559 aaKnown RBP17.89■□□□□ 0.45
CIT-212ENST00000543239 TNFSF13BQ9Y275 285 aa17.89■□□□□ 0.45
CIT-212ENST00000543239 ATG2AQ2TAZ0 1938 aa17.89■□□□□ 0.45
CIT-212ENST00000543239 NPHP3-ACAD11A0A0J9YXS1 232 aa17.88■□□□□ 0.45
CIT-212ENST00000543239 SLC16A4O15374 487 aa17.88■□□□□ 0.45
CIT-212ENST00000543239 NCK2O43639 380 aa17.88■□□□□ 0.45
CIT-212ENST00000543239 PBX3P40426 434 aa17.88■□□□□ 0.45
CIT-212ENST00000543239 MLH1P40692 756 aa17.88■□□□□ 0.45
CIT-212ENST00000543239 ZNF131P52739 623 aa17.88■□□□□ 0.45
CIT-212ENST00000543239 MRPS5P82675 430 aaKnown RBP17.88■□□□□ 0.45
CIT-212ENST00000543239 COL19A1Q14993 1142 aa17.88■□□□□ 0.45
CIT-212ENST00000543239 NT5DC1Q5TFE4 455 aa17.88■□□□□ 0.45
CIT-212ENST00000543239 RRAGBQ5VZM2 374 aa17.88■□□□□ 0.45
CIT-212ENST00000543239 CCDC73Q6ZRK6 1079 aa17.88■□□□□ 0.45
CIT-212ENST00000543239 TAS1R3Q7RTX0 852 aa17.88■□□□□ 0.45
CIT-212ENST00000543239 TMEM161BQ8NDZ6 487 aa17.88■□□□□ 0.45
CIT-212ENST00000543239 KCNG4Q8TDN1 519 aa17.88■□□□□ 0.45
CIT-212ENST00000543239 GAD1Q99259 594 aa17.88■□□□□ 0.45
CIT-212ENST00000543239 TMEM175Q9BSA9 504 aa17.88■□□□□ 0.45
CIT-212ENST00000543239 APOL6Q9BWW8 343 aa17.88■□□□□ 0.45
CIT-212ENST00000543239 MRPL4Q9BYD3 311 aaKnown RBP17.88■□□□□ 0.45
CIT-212ENST00000543239 CFAP45Q9UL16 551 aa17.88■□□□□ 0.45
CIT-212ENST00000543239 CUTAO60888 179 aa17.87■□□□□ 0.45
CIT-212ENST00000543239 FAM13AO94988 1023 aa17.87■□□□□ 0.45
CIT-212ENST00000543239 BRD1O95696 1058 aa17.87■□□□□ 0.45
CIT-212ENST00000543239 POMCP01189 267 aa17.87■□□□□ 0.45
CIT-212ENST00000543239 KRT18P05783 430 aaKnown RBP17.87■□□□□ 0.45
CIT-212ENST00000543239 GALTP07902 379 aa17.87■□□□□ 0.45
CIT-212ENST00000543239 IRS1P35568 1242 aa17.87■□□□□ 0.45
CIT-212ENST00000543239 AFF1P51825 1210 aaKnown RBP17.87■□□□□ 0.45
CIT-212ENST00000543239 NCKAP1LP55160 1127 aa17.87■□□□□ 0.45
CIT-212ENST00000543239 CACNB1Q02641 598 aaPredicted RBP17.87■□□□□ 0.45
CIT-212ENST00000543239 STRN3Q13033 797 aa17.87■□□□□ 0.45
CIT-212ENST00000543239 GIT2Q14161 759 aa17.87■□□□□ 0.45
CIT-212ENST00000543239 EEF1DP3Q658K8 133 aa17.87■□□□□ 0.45
CIT-212ENST00000543239 ZNF280BQ86YH2 543 aa17.87■□□□□ 0.45
CIT-212ENST00000543239 TMEM169Q96HH4 297 aa17.87■□□□□ 0.45
CIT-212ENST00000543239 FAM193BQ96PV7 902 aaPredicted RBP17.87■□□□□ 0.45
CIT-212ENST00000543239 ASB2Q96Q27 587 aa17.87■□□□□ 0.45
CIT-212ENST00000543239 ACO2Q99798 780 aaKnown RBP17.87■□□□□ 0.45
CIT-212ENST00000543239 GBP3Q9H0R5 595 aa17.87■□□□□ 0.45
CIT-212ENST00000543239 PARVGQ9HBI0 331 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms