RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 CDY2AQ9Y6F7 541 aa11.67□□□□□ -0.54
DDB1-221ENST00000543162 CENPFP49454 3210 aa11.66□□□□□ -0.54
DDB1-221ENST00000543162 CNTNAP2Q9UHC6 1331 aa11.66□□□□□ -0.54
DDB1-221ENST00000543162 TTLL13PA6NNM8 815 aa11.66□□□□□ -0.54
DDB1-221ENST00000543162 KIAA0391O15091 583 aaKnown RBP11.66□□□□□ -0.54
DDB1-221ENST00000543162 CLDN3O15551 220 aa11.66□□□□□ -0.54
DDB1-221ENST00000543162 B4GALT5O43286 388 aa11.66□□□□□ -0.54
DDB1-221ENST00000543162 AP5Z1O43299 807 aa11.66□□□□□ -0.54
DDB1-221ENST00000543162 CBFA2T2O43439 604 aa11.66□□□□□ -0.54
DDB1-221ENST00000543162 CAND2O75155 1236 aa11.66□□□□□ -0.54
DDB1-221ENST00000543162 TOM1L1O75674 476 aa11.66□□□□□ -0.54
DDB1-221ENST00000543162 AKAP3O75969 853 aa11.66□□□□□ -0.54
DDB1-221ENST00000543162 EDN1P05305 212 aa11.66□□□□□ -0.54
DDB1-221ENST00000543162 CTSHP09668 335 aa11.66□□□□□ -0.54
DDB1-221ENST00000543162 SFPQP23246 707 aaKnown RBP eCLIP11.66□□□□□ -0.54
DDB1-221ENST00000543162 ADSSP30520 456 aa11.66□□□□□ -0.54
DDB1-221ENST00000543162 PSMC2P35998 433 aaKnown RBP11.66□□□□□ -0.54
DDB1-221ENST00000543162 CASP4P49662 377 aa11.66□□□□□ -0.54
DDB1-221ENST00000543162 MNX1P50219 401 aaPredicted RBP11.66□□□□□ -0.54
DDB1-221ENST00000543162 UBASH3AP57075 661 aa11.66□□□□□ -0.54
DDB1-221ENST00000543162 NCBP1Q09161 790 aaKnown RBP11.66□□□□□ -0.54
DDB1-221ENST00000543162 HSP90AA2PQ14568 343 aaPredicted RBP11.66□□□□□ -0.54
DDB1-221ENST00000543162 SNX17Q15036 470 aa11.66□□□□□ -0.54
DDB1-221ENST00000543162 KRT31Q15323 416 aa11.66□□□□□ -0.54
DDB1-221ENST00000543162 PCBP1Q15365 356 aaKnown RBP eCLIP11.66□□□□□ -0.54
DDB1-221ENST00000543162 AMHR2Q16671 573 aa11.66□□□□□ -0.54
DDB1-221ENST00000543162 FILIP1LQ4L180 1135 aa11.66□□□□□ -0.54
DDB1-221ENST00000543162 ATF7IP2Q5U623 682 aa11.66□□□□□ -0.54
DDB1-221ENST00000543162 TSHZ1Q6ZSZ6 1077 aa11.66□□□□□ -0.54
DDB1-221ENST00000543162 CATSPER4Q7RTX7 472 aa11.66□□□□□ -0.54
DDB1-221ENST00000543162 FAM186BQ8IYM0 893 aa11.66□□□□□ -0.54
DDB1-221ENST00000543162 DHX38Q92620 1227 aaKnown RBP11.66□□□□□ -0.54
DDB1-221ENST00000543162 ZBTB45Q96K62 511 aaPredicted RBP11.66□□□□□ -0.54
DDB1-221ENST00000543162 MKNK1Q9BUB5 465 aa11.66□□□□□ -0.54
DDB1-221ENST00000543162 METTL14Q9HCE5 456 aaKnown RBP11.66□□□□□ -0.54
DDB1-221ENST00000543162 TAB2Q9NYJ8 693 aa11.66□□□□□ -0.54
DDB1-221ENST00000543162 IFNKQ9P0W0 207 aa11.66□□□□□ -0.54
DDB1-221ENST00000543162 ARMCX3Q9UH62 379 aaPredicted RBP11.66□□□□□ -0.54
DDB1-221ENST00000543162 STYXL1Q9Y6J8 313 aa11.66□□□□□ -0.54
DDB1-221ENST00000543162 MROH7Q68CQ1 1323 aa11.65□□□□□ -0.54
DDB1-221ENST00000543162 A0A0B4J269 797 aa11.65□□□□□ -0.54
DDB1-221ENST00000543162 GOLGA8IPA6NC78 632 aa11.65□□□□□ -0.54
DDB1-221ENST00000543162 LRRC10BA6NIK2 292 aa11.65□□□□□ -0.54
DDB1-221ENST00000543162 GOLGA8JA6NMD2 632 aa11.65□□□□□ -0.54
DDB1-221ENST00000543162 TLR3O15455 904 aaKnown RBP11.65□□□□□ -0.54
DDB1-221ENST00000543162 TSPAN1O60635 241 aa11.65□□□□□ -0.54
DDB1-221ENST00000543162 ADCY5O95622 1261 aa11.65□□□□□ -0.54
DDB1-221ENST00000543162 CHRNA1P02708 482 aa11.65□□□□□ -0.54
DDB1-221ENST00000543162 TPM3P06753 285 aa11.65□□□□□ -0.54
DDB1-221ENST00000543162 COL6A1P12109 1028 aa11.65□□□□□ -0.54
DDB1-221ENST00000543162 PRKCSHP14314 528 aaPredicted RBP11.65□□□□□ -0.54
DDB1-221ENST00000543162 FGFR4P22455 802 aa11.65□□□□□ -0.54
DDB1-221ENST00000543162 ZNF75DP51815 510 aa11.65□□□□□ -0.54
DDB1-221ENST00000543162 COPB1P53618 953 aaKnown RBP11.65□□□□□ -0.54
DDB1-221ENST00000543162 ATN1P54259 1190 aaPredicted RBP11.65□□□□□ -0.54
DDB1-221ENST00000543162 MARSP56192 900 aaKnown RBP11.65□□□□□ -0.54
DDB1-221ENST00000543162 TRIM71Q2Q1W2 868 aaKnown RBP11.65□□□□□ -0.54
DDB1-221ENST00000543162 ZNF568Q3ZCX4 644 aa11.65□□□□□ -0.54
DDB1-221ENST00000543162 MPZL3Q6UWV2 235 aa11.65□□□□□ -0.54
DDB1-221ENST00000543162 SLC39A5Q6ZMH5 540 aa11.65□□□□□ -0.54
DDB1-221ENST00000543162 FRMD5Q7Z6J6 570 aa11.65□□□□□ -0.54
DDB1-221ENST00000543162 ZBTB33Q86T24 672 aa11.65□□□□□ -0.54
DDB1-221ENST00000543162 FAM126BQ8IXS8 530 aa11.65□□□□□ -0.54
DDB1-221ENST00000543162 GPD1LQ8N335 351 aa11.65□□□□□ -0.54
DDB1-221ENST00000543162 CCDC155Q8N6L0 562 aa11.65□□□□□ -0.54
DDB1-221ENST00000543162 RDH13Q8NBN7 331 aa11.65□□□□□ -0.54
DDB1-221ENST00000543162 DIS3LQ8TF46 1054 aaKnown RBP11.65□□□□□ -0.54
DDB1-221ENST00000543162 TMEM40Q8WWA1 233 aa11.65□□□□□ -0.54
DDB1-221ENST00000543162 SAAL1Q96ER3 474 aa11.65□□□□□ -0.54
DDB1-221ENST00000543162 TUBGCP2Q9BSJ2 902 aa11.65□□□□□ -0.54
DDB1-221ENST00000543162 MSTO1Q9BUK6 570 aa11.65□□□□□ -0.54
DDB1-221ENST00000543162 XPO4Q9C0E2 1151 aaKnown RBP11.65□□□□□ -0.54
DDB1-221ENST00000543162 VPS16Q9H269 839 aa11.65□□□□□ -0.54
DDB1-221ENST00000543162 KIAA1586Q9HCI6 787 aa11.65□□□□□ -0.54
DDB1-221ENST00000543162 AGO2Q9UKV8 859 aaKnown RBP11.65□□□□□ -0.54
DDB1-221ENST00000543162 TNFSF13BQ9Y275 285 aa11.65□□□□□ -0.54
DDB1-221ENST00000543162 KIAA0100Q14667 2235 aaKnown RBP11.64□□□□□ -0.55
DDB1-221ENST00000543162 PES1O00541 588 aaKnown RBP11.64□□□□□ -0.55
DDB1-221ENST00000543162 N4BP3O15049 544 aa11.64□□□□□ -0.55
DDB1-221ENST00000543162 MAPK13O15264 365 aa11.64□□□□□ -0.55
DDB1-221ENST00000543162 EXTL3O43909 919 aa11.64□□□□□ -0.55
DDB1-221ENST00000543162 PQBP1O60828 265 aaKnown RBP11.64□□□□□ -0.55
DDB1-221ENST00000543162 LDHAP00338 332 aaKnown RBP11.64□□□□□ -0.55
DDB1-221ENST00000543162 HARSP12081 509 aaKnown RBP11.64□□□□□ -0.55
DDB1-221ENST00000543162 CKBP12277 381 aa11.64□□□□□ -0.55
DDB1-221ENST00000543162 KRT13P13646 458 aa11.64□□□□□ -0.55
DDB1-221ENST00000543162 ARF4P18085 180 aaPredicted RBP11.64□□□□□ -0.55
DDB1-221ENST00000543162 PROZP22891 400 aa11.64□□□□□ -0.55
DDB1-221ENST00000543162 MCL1Q07820 350 aa11.64□□□□□ -0.55
DDB1-221ENST00000543162 MGAT3Q09327 533 aa11.64□□□□□ -0.55
DDB1-221ENST00000543162 NOLC1Q14978 699 aaKnown RBP eCLIP11.64□□□□□ -0.554e-6■□□□□ 8.2
DDB1-221ENST00000543162 SNRNP35Q16560 246 aaKnown RBP11.64□□□□□ -0.55
DDB1-221ENST00000543162 MAN2A1Q16706 1144 aa11.64□□□□□ -0.55
DDB1-221ENST00000543162 FAM26DQ5JW98 314 aa11.64□□□□□ -0.55
DDB1-221ENST00000543162 EEF1DP3Q658K8 133 aa11.64□□□□□ -0.55
DDB1-221ENST00000543162 APTXQ7Z2E3 356 aaKnown RBP11.64□□□□□ -0.55
DDB1-221ENST00000543162 APBB1IPQ7Z5R6 666 aaPredicted RBP11.64□□□□□ -0.55
DDB1-221ENST00000543162 TRIM59Q8IWR1 403 aa11.64□□□□□ -0.55
DDB1-221ENST00000543162 CAGE1Q8TC20 777 aa11.64□□□□□ -0.55
DDB1-221ENST00000543162 CPB2Q96IY4 423 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms