RNA–Protein interactions for RNA: ENST00000542680.1

CACNA1C-IT3-201, CACNA1C intronic transcript 3, humanhuman

TSL 3 BASIC

Gene CACNA1C-IT3, Length 622 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-IT3-201ENST00000542680 C2orf40Q9H1Z8 148 aa13.52□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 GPRC5CQ9NQ84 441 aa13.52□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 KMT5AQ9NQR1 393 aa13.52□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 ARHGAP28Q9P2N2 729 aa13.52□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 EVPLQ92817 2033 aa13.51□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 C17orf102A2RUQ5 167 aa13.51□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 PDXKO00764 312 aa13.51□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 FGFR1OPO95684 399 aaKnown RBP13.51□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 GLRA2P23416 452 aa13.51□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 KLRC1P26715 233 aa13.51□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 EFNA5P52803 228 aa13.51□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 KCNA10Q16322 511 aa13.51□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 NFIL3Q16649 462 aa13.51□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 KNOP1Q1ED39 458 aaKnown RBP13.51□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 EDRF1Q3B7T1 1238 aa13.51□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 L1TD1Q5T7N2 865 aaKnown RBP13.51□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 SPATA1Q5VX52 437 aa13.51□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 CDCA2Q69YH5 1023 aaPredicted RBP13.51□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 EFCAB12Q6NXP0 572 aa13.51□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 TAF2Q6P1X5 1199 aa13.51□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 CXCL17Q6UXB2 119 aa13.51□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 MAEAQ7L5Y9 396 aa13.51□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 HAUS6Q7Z4H7 955 aa13.51□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 IFNLR1Q8IU57 520 aaPredicted RBP13.51□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 AOPEPQ8N6M6 819 aa13.51□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 TMEM161BQ8NDZ6 487 aa13.51□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 HPS3Q969F9 1004 aa13.51□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 GLT1D1Q96MS3 346 aa13.51□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 GRPEL1Q9HAV7 217 aa13.51□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 TYW1Q9NV66 732 aaKnown RBP13.51□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 GTF2IRD1Q9UHL9 959 aa13.51□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 EXOC7Q9UPT5 735 aa13.51□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 CTNND2Q9UQB3 1225 aa13.51□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 TRAF3IP3Q9Y228 551 aa13.51□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 PCDHA11Q9Y5I1 949 aa13.51□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 ANKRD11Q6UB99 2663 aaPredicted RBP13.51□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 SFI1A8K8P3 1242 aa13.5□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 ACLYP53396 1101 aa13.5□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 IRX5P78411 483 aaPredicted RBP13.5□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 SPAG1Q07617 926 aa13.5□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 MKRN4PQ13434 485 aaPredicted RBP13.5□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 MYBPC2Q14324 1141 aa13.5□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 NCAPHQ15003 741 aa13.5□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 ZCWPW2Q504Y3 356 aa13.5□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 MARCH8Q5T0T0 291 aa13.5□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 KLHL10Q6JEL2 608 aa13.5□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 TTI2Q6NXR4 508 aa13.5□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 HS2ST1Q7LGA3 356 aa13.5□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 LUZP1Q86V48 1076 aa13.5□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 ZNF410Q86VK4 478 aa13.5□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 MAP4K3Q8IVH8 894 aa13.5□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 ZBTB8OSQ8IWT0 167 aa13.5□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 TMEM199Q8N511 208 aa13.5□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 RNF214Q8ND24 703 aa13.5□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 ASAP3Q8TDY4 903 aa13.5□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 PRPF31Q8WWY3 499 aaKnown RBP13.5□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 BSNDQ8WZ55 320 aa13.5□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 TMEM143Q96AN5 459 aa13.5□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 ACCSQ96QU6 501 aa13.5□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 MTIF3Q9H2K0 278 aaKnown RBP13.5□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 KCTD10Q9H3F6 313 aa13.5□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 TMEM134Q9H6X4 195 aa13.5□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 SUGCTQ9HAC7 445 aa13.5□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 TBC1D7Q9P0N9 293 aa13.5□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 SUCLA2Q9P2R7 463 aaPredicted RBP13.5□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 CCDC169A6NNP5 214 aa13.49□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 CALUO43852 315 aaPredicted RBP13.49□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 MYBP10242 640 aa13.49□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 NMT1P30419 496 aaKnown RBP13.49□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 CASP5P51878 434 aa13.49□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 IGBP1P78318 339 aa13.49□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 LAMTOR4Q0VGL1 99 aa13.49□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 TCF15Q12870 199 aa13.49□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 CAPSQ13938 189 aa13.49□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 HSP90AA2PQ14568 343 aaPredicted RBP13.49□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 PCBP1Q15365 356 aaKnown RBP eCLIP13.49□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 TPD52L1Q16890 204 aaPredicted RBP13.49□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 RPAINQ86UA6 219 aa13.49□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 FAM114A1Q8IWE2 563 aa13.49□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 C12orf56Q8IXR9 622 aa13.49□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 ZC3H3Q8IXZ2 948 aaKnown RBP13.49□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 NME8Q8N427 588 aa13.49□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 METTL13Q8N6R0 699 aa13.49□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 DEPTORQ8TB45 409 aa13.49□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 TRAPPC12Q8WVT3 735 aa13.49□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 FGFBP2Q9BYJ0 223 aa13.49□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 GBP3Q9H0R5 595 aa13.49□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 IL23AQ9NPF7 189 aa13.49□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 SETD4Q9NVD3 440 aa13.49□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 MAPK8IP1Q9UQF2 711 aa13.49□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 NFE2L3Q9Y4A8 694 aa13.49□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 DENND3A2RUS2 1198 aa13.48□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 LRRIQ4A6NIV6 560 aa13.48□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 SLC16A4O15374 487 aa13.48□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 PIGRP01833 764 aa13.48□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 CYP2C9P11712 490 aa13.48□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 PRKCSHP14314 528 aaPredicted RBP13.48□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 ZNF18P17022 549 aa13.48□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 RPL13P26373 211 aaKnown RBP13.48□□□□□ -0.25
CACNA1C-IT3-201ENST00000542680 PHKA2P46019 1235 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms