RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 AP1M1Q9BXS5 423 aa7.07□□□□□ -1.28
PTPRO-208ENST00000542557 MOV10L1Q9BXT6 1211 aaKnown RBP7.07□□□□□ -1.28
PTPRO-208ENST00000542557 TSPYL1Q9H0U9 437 aa7.07□□□□□ -1.28
PTPRO-208ENST00000542557 TAOK3Q9H2K8 898 aa7.07□□□□□ -1.28
PTPRO-208ENST00000542557 RPAP3Q9H6T3 665 aaPredicted RBP7.07□□□□□ -1.28
PTPRO-208ENST00000542557 FAM114A2Q9NRY5 505 aa7.07□□□□□ -1.28
PTPRO-208ENST00000542557 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.07□□□□□ -1.28
PTPRO-208ENST00000542557 TAS2R14Q9NYV8 317 aa7.07□□□□□ -1.28
PTPRO-208ENST00000542557 NOCTQ9UK39 431 aaKnown RBP7.07□□□□□ -1.28
PTPRO-208ENST00000542557 CTDP1Q9Y5B0 961 aaPredicted RBP7.07□□□□□ -1.28
PTPRO-208ENST00000542557 SYNGAP1Q96PV0 1343 aa7.07□□□□□ -1.28
PTPRO-208ENST00000542557 GOLGA6L10A0A0M3HER8 536 aa7.07□□□□□ -1.28
PTPRO-208ENST00000542557 HMGB1P1B2RPK0 211 aaPredicted RBP7.07□□□□□ -1.28
PTPRO-208ENST00000542557 EIF3HO15372 352 aaKnown RBP eCLIP7.07□□□□□ -1.28
PTPRO-208ENST00000542557 SLC16A4O15374 487 aa7.07□□□□□ -1.28
PTPRO-208ENST00000542557 ATP9AO75110 1047 aa7.07□□□□□ -1.28
PTPRO-208ENST00000542557 RTN2O75298 545 aa7.07□□□□□ -1.28
PTPRO-208ENST00000542557 ADRB2P07550 413 aa7.07□□□□□ -1.28
PTPRO-208ENST00000542557 CCND2P30279 289 aa7.07□□□□□ -1.28
PTPRO-208ENST00000542557 RTP1P59025 263 aa7.07□□□□□ -1.28
PTPRO-208ENST00000542557 TGFB2P61812 414 aa7.07□□□□□ -1.28
PTPRO-208ENST00000542557 GPC5P78333 572 aa7.07□□□□□ -1.28
PTPRO-208ENST00000542557 DMP1Q13316 513 aaPredicted RBP7.07□□□□□ -1.28
PTPRO-208ENST00000542557 MTMR2Q13614 643 aa7.07□□□□□ -1.28
PTPRO-208ENST00000542557 HLTFQ14527 1009 aaKnown RBP eCLIP7.07□□□□□ -1.28
PTPRO-208ENST00000542557 SNRNP35Q16560 246 aaKnown RBP7.07□□□□□ -1.28
PTPRO-208ENST00000542557 XKR9Q5GH70 373 aa7.07□□□□□ -1.28
PTPRO-208ENST00000542557 FAM102BQ5T8I3 360 aa7.07□□□□□ -1.28
PTPRO-208ENST00000542557 DCAF12L1Q5VU92 463 aa7.07□□□□□ -1.28
PTPRO-208ENST00000542557 ARHGEF16Q5VV41 709 aa7.07□□□□□ -1.28
PTPRO-208ENST00000542557 USP37Q86T82 979 aa7.07□□□□□ -1.28
PTPRO-208ENST00000542557 VSIG10LQ86VR7 867 aa7.07□□□□□ -1.28
PTPRO-208ENST00000542557 REPS2Q8NFH8 660 aa7.07□□□□□ -1.28
PTPRO-208ENST00000542557 EPS8L1Q8TE68 723 aa7.07□□□□□ -1.28
PTPRO-208ENST00000542557 SLC20A1Q8WUM9 679 aa7.07□□□□□ -1.28
PTPRO-208ENST00000542557 JDP2Q8WYK2 163 aa7.07□□□□□ -1.28
PTPRO-208ENST00000542557 KCNN1Q92952 543 aa7.07□□□□□ -1.28
PTPRO-208ENST00000542557 C12orf42Q96LP6 360 aa7.07□□□□□ -1.28
PTPRO-208ENST00000542557 RNPC3Q96LT9 517 aaKnown RBP7.07□□□□□ -1.28
PTPRO-208ENST00000542557 RPS6KC1Q96S38 1066 aa7.07□□□□□ -1.28
PTPRO-208ENST00000542557 PDGFDQ9GZP0 370 aaPredicted RBP7.07□□□□□ -1.28
PTPRO-208ENST00000542557 RAB17Q9H0T7 212 aa7.07□□□□□ -1.28
PTPRO-208ENST00000542557 HOMER2Q9NSB8 354 aa7.07□□□□□ -1.28
PTPRO-208ENST00000542557 PIM2Q9P1W9 311 aa7.07□□□□□ -1.28
PTPRO-208ENST00000542557 TBX20Q9UMR3 447 aa7.07□□□□□ -1.28
PTPRO-208ENST00000542557 COG5Q9UP83 839 aa7.07□□□□□ -1.28
PTPRO-208ENST00000542557 PCDHA10Q9Y5I2 948 aa7.07□□□□□ -1.28
PTPRO-208ENST00000542557 NFASCO94856 1347 aa7.06□□□□□ -1.28
PTPRO-208ENST00000542557 ZEB2O60315 1214 aa7.06□□□□□ -1.28
PTPRO-208ENST00000542557 KRT14P02533 472 aa7.06□□□□□ -1.28
PTPRO-208ENST00000542557 FGGP02679 453 aa7.06□□□□□ -1.28
PTPRO-208ENST00000542557 ITGA4P13612 1032 aa7.06□□□□□ -1.28
PTPRO-208ENST00000542557 ADSSP30520 456 aa7.06□□□□□ -1.28
PTPRO-208ENST00000542557 NPTX2P47972 431 aa7.06□□□□□ -1.28
PTPRO-208ENST00000542557 GPC3P51654 580 aa7.06□□□□□ -1.28
PTPRO-208ENST00000542557 DHX34Q14147 1143 aaKnown RBP7.06□□□□□ -1.28
PTPRO-208ENST00000542557 TRADDQ15628 312 aa7.06□□□□□ -1.28
PTPRO-208ENST00000542557 PTPROQ16827 1216 aa7.06□□□□□ -1.28
PTPRO-208ENST00000542557 KRT39Q6A163 491 aa7.06□□□□□ -1.28
PTPRO-208ENST00000542557 OTUD6AQ7L8S5 288 aa7.06□□□□□ -1.28
PTPRO-208ENST00000542557 NLRX1Q86UT6 975 aa7.06□□□□□ -1.28
PTPRO-208ENST00000542557 EFCAB13Q8IY85 973 aa7.06□□□□□ -1.28
PTPRO-208ENST00000542557 RPUSD2Q8IZ73 545 aaKnown RBP7.06□□□□□ -1.28
PTPRO-208ENST00000542557 ATP6V0A1Q93050 837 aa7.06□□□□□ -1.28
PTPRO-208ENST00000542557 AS3MTQ9HBK9 375 aa7.06□□□□□ -1.28
PTPRO-208ENST00000542557 TMEM8AQ9HCN3 771 aa7.06□□□□□ -1.28
PTPRO-208ENST00000542557 GPRC5CQ9NQ84 441 aa7.06□□□□□ -1.28
PTPRO-208ENST00000542557 RNF146Q9NTX7 359 aa7.06□□□□□ -1.28
PTPRO-208ENST00000542557 SEPT11Q9NVA2 429 aaKnown RBP7.06□□□□□ -1.28
PTPRO-208ENST00000542557 AMACRQ9UHK6 382 aa7.06□□□□□ -1.28
PTPRO-208ENST00000542557 COL11A1P12107 1806 aaPredicted RBP7.06□□□□□ -1.28
PTPRO-208ENST00000542557 FAM187AA6NFU0 413 aa7.06□□□□□ -1.28
PTPRO-208ENST00000542557 SRRM3A6NNA2 597 aaPredicted RBP7.06□□□□□ -1.28
PTPRO-208ENST00000542557 STAM2O75886 525 aa7.06□□□□□ -1.28
PTPRO-208ENST00000542557 GGPS1O95749 300 aa7.06□□□□□ -1.28
PTPRO-208ENST00000542557 FTLP02792 175 aaPredicted RBP7.06□□□□□ -1.28
PTPRO-208ENST00000542557 MYCLP12524 364 aaPredicted RBP7.06□□□□□ -1.28
PTPRO-208ENST00000542557 HSD17B3P37058 310 aa7.06□□□□□ -1.28
PTPRO-208ENST00000542557 MFAP3P55082 362 aa7.06□□□□□ -1.28
PTPRO-208ENST00000542557 BACE1P56817 501 aa7.06□□□□□ -1.28
PTPRO-208ENST00000542557 DCAF15Q66K64 600 aa7.06□□□□□ -1.28
PTPRO-208ENST00000542557 PLA2G4FQ68DD2 849 aa7.06□□□□□ -1.28
PTPRO-208ENST00000542557 ANO5Q75V66 913 aa7.06□□□□□ -1.28
PTPRO-208ENST00000542557 SCYL3Q8IZE3 742 aa7.06□□□□□ -1.28
PTPRO-208ENST00000542557 UBL4BQ8N7F7 174 aa7.06□□□□□ -1.28
PTPRO-208ENST00000542557 MCPH1Q8NEM0 835 aa7.06□□□□□ -1.28
PTPRO-208ENST00000542557 PARD3BQ8TEW8 1205 aa7.06□□□□□ -1.28
PTPRO-208ENST00000542557 ATG4CQ96DT6 458 aa7.06□□□□□ -1.28
PTPRO-208ENST00000542557 CDHR1Q96JP9 859 aa7.06□□□□□ -1.28
PTPRO-208ENST00000542557 ATP6V1G3Q96LB4 118 aa7.06□□□□□ -1.28
PTPRO-208ENST00000542557 FAM81BQ96LP2 452 aa7.06□□□□□ -1.28
PTPRO-208ENST00000542557 MFSD14AQ96MC6 490 aa7.06□□□□□ -1.28
PTPRO-208ENST00000542557 KREMEN1Q96MU8 473 aa7.06□□□□□ -1.28
PTPRO-208ENST00000542557 ZSWIM1Q9BR11 485 aa7.06□□□□□ -1.28
PTPRO-208ENST00000542557 ZNF112Q9UJU3 913 aa7.06□□□□□ -1.28
PTPRO-208ENST00000542557 ADAMTS5Q9UNA0 930 aa7.06□□□□□ -1.28
PTPRO-208ENST00000542557 PLAAQ9Y263 795 aa7.06□□□□□ -1.28
PTPRO-208ENST00000542557 UTP11Q9Y3A2 253 aaKnown RBP7.06□□□□□ -1.28
PTPRO-208ENST00000542557 RRP15Q9Y3B9 282 aaKnown RBP7.06□□□□□ -1.28
PTPRO-208ENST00000542557 GOLGB1Q14789 3259 aaKnown RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms