RNA–Protein interactions for RNA: ENST00000541713.5

PTPN1-202, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

TSL 2 BASIC

Gene PTPN1, Length 3,469 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-202ENST00000541713 PPATQ06203 517 aa14.59□□□□□ -0.07
PTPN1-202ENST00000541713 MAPK7Q13164 816 aa14.59□□□□□ -0.07
PTPN1-202ENST00000541713 BAATQ14032 418 aaPredicted RBP14.59□□□□□ -0.07
PTPN1-202ENST00000541713 SPRED3Q2MJR0 410 aa14.59□□□□□ -0.07
PTPN1-202ENST00000541713 B4GALNT4Q76KP1 1039 aa14.59□□□□□ -0.07
PTPN1-202ENST00000541713 ZDHHC14Q8IZN3 488 aa14.59□□□□□ -0.07
PTPN1-202ENST00000541713 GDAP1Q8TB36 358 aa14.59□□□□□ -0.07
PTPN1-202ENST00000541713 TMEM143Q96AN5 459 aa14.59□□□□□ -0.07
PTPN1-202ENST00000541713 OLFML3Q9NRN5 406 aa14.59□□□□□ -0.07
PTPN1-202ENST00000541713 SEPT9Q9UHD8 586 aaPredicted RBP14.59□□□□□ -0.07
PTPN1-202ENST00000541713 NRAPQ86VF7 1730 aa14.59□□□□□ -0.07
PTPN1-202ENST00000541713 MYH4Q9Y623 1939 aa14.59□□□□□ -0.07
PTPN1-202ENST00000541713 SBF2Q86WG5 1849 aa14.59□□□□□ -0.07
PTPN1-202ENST00000541713 KLRG2A4D1S0 409 aaPredicted RBP14.58□□□□□ -0.07
PTPN1-202ENST00000541713 NT5C2P49902 561 aa14.58□□□□□ -0.07
PTPN1-202ENST00000541713 TMEM130Q8N3G9 435 aa14.58□□□□□ -0.07
PTPN1-202ENST00000541713 SLC5A5Q92911 643 aa14.58□□□□□ -0.07
PTPN1-202ENST00000541713 MBOAT7Q96N66 472 aa14.58□□□□□ -0.07
PTPN1-202ENST00000541713 DDX23Q9BUQ8 820 aaKnown RBP14.58□□□□□ -0.07
PTPN1-202ENST00000541713 CREB1P16220 341 aa14.58□□□□□ -0.08
PTPN1-202ENST00000541713 CIITAP33076 1130 aa14.58□□□□□ -0.08
PTPN1-202ENST00000541713 QARSP47897 775 aaKnown RBP14.58□□□□□ -0.08
PTPN1-202ENST00000541713 SNRNP35Q16560 246 aaKnown RBP14.58□□□□□ -0.08
PTPN1-202ENST00000541713 TKFCQ3LXA3 575 aa14.58□□□□□ -0.08
PTPN1-202ENST00000541713 TTC27Q6P3X3 843 aa14.58□□□□□ -0.08
PTPN1-202ENST00000541713 CNKSR1Q969H4 720 aa14.58□□□□□ -0.08
PTPN1-202ENST00000541713 ATG4CQ96DT6 458 aa14.58□□□□□ -0.08
PTPN1-202ENST00000541713 TMBIM4Q9HC24 238 aa14.58□□□□□ -0.08
PTPN1-202ENST00000541713 CTNNAL1Q9UBT7 734 aa14.58□□□□□ -0.08
PTPN1-202ENST00000541713 ANAPC7Q9UJX3 599 aa14.58□□□□□ -0.08
PTPN1-202ENST00000541713 GSTTP1A0A1W2PQM5 241 aa14.58□□□□□ -0.08
PTPN1-202ENST00000541713 SEL1L2Q5TEA6 688 aa14.58□□□□□ -0.08
PTPN1-202ENST00000541713 TMC3Q7Z5M5 1100 aa14.58□□□□□ -0.08
PTPN1-202ENST00000541713 CEP57Q86XR8 500 aa14.58□□□□□ -0.08
PTPN1-202ENST00000541713 ZBTB45Q96K62 511 aaPredicted RBP14.58□□□□□ -0.08
PTPN1-202ENST00000541713 KREMEN1Q96MU8 473 aa14.58□□□□□ -0.08
PTPN1-202ENST00000541713 TCHPQ9BT92 498 aa14.58□□□□□ -0.08
PTPN1-202ENST00000541713 TUFT1Q9NNX1 390 aa14.58□□□□□ -0.08
PTPN1-202ENST00000541713 KMT5AQ9NQR1 393 aa14.58□□□□□ -0.08
PTPN1-202ENST00000541713 TTC7AQ9ULT0 858 aaPredicted RBP14.58□□□□□ -0.08
PTPN1-202ENST00000541713 CFHP08603 1231 aa14.57□□□□□ -0.08
PTPN1-202ENST00000541713 VIL1P09327 827 aaKnown RBP14.57□□□□□ -0.08
PTPN1-202ENST00000541713 CD58P19256 250 aa14.57□□□□□ -0.08
PTPN1-202ENST00000541713 CNGA1P29973 690 aa14.57□□□□□ -0.08
PTPN1-202ENST00000541713 CAP2P40123 477 aa14.57□□□□□ -0.08
PTPN1-202ENST00000541713 RPL21P46778 160 aaKnown RBP14.57□□□□□ -0.08
PTPN1-202ENST00000541713 DENND2CQ68D51 928 aa14.57□□□□□ -0.08
PTPN1-202ENST00000541713 ZNF564Q8TBZ8 553 aaPredicted RBP14.57□□□□□ -0.08
PTPN1-202ENST00000541713 ACTRT1Q8TDG2 376 aa14.57□□□□□ -0.08
PTPN1-202ENST00000541713 SCLT1Q96NL6 688 aa14.57□□□□□ -0.08
PTPN1-202ENST00000541713 ACCSQ96QU6 501 aa14.57□□□□□ -0.08
PTPN1-202ENST00000541713 MTFR1LQ9H019 292 aa14.57□□□□□ -0.08
PTPN1-202ENST00000541713 SUCLA2Q9P2R7 463 aaPredicted RBP14.57□□□□□ -0.08
PTPN1-202ENST00000541713 TRPC6Q9Y210 931 aa14.57□□□□□ -0.08
PTPN1-202ENST00000541713 RGL2O15211 777 aa14.57□□□□□ -0.08
PTPN1-202ENST00000541713 P4HBP07237 508 aaKnown RBP14.57□□□□□ -0.08
PTPN1-202ENST00000541713 GTF2A1P52655 376 aaPredicted RBP14.57□□□□□ -0.08
PTPN1-202ENST00000541713 FAM133BQ5BKY9 247 aaKnown RBP14.57□□□□□ -0.08
PTPN1-202ENST00000541713 WDR78Q5VTH9 848 aa14.57□□□□□ -0.08
PTPN1-202ENST00000541713 CYP4F22Q6NT55 531 aa14.57□□□□□ -0.08
PTPN1-202ENST00000541713 RSBN1LQ6PCB5 846 aaPredicted RBP14.57□□□□□ -0.08
PTPN1-202ENST00000541713 DEFB132Q7Z7B7 95 aa14.57□□□□□ -0.08
PTPN1-202ENST00000541713 RAPGEF5Q92565 580 aa14.57□□□□□ -0.08
PTPN1-202ENST00000541713 BORCS6Q96GS4 357 aa14.57□□□□□ -0.08
PTPN1-202ENST00000541713 EPN3Q9H201 632 aa14.57□□□□□ -0.08
PTPN1-202ENST00000541713 C10orf88Q9H8K7 445 aa14.57□□□□□ -0.08
PTPN1-202ENST00000541713 SLC16A3O15427 465 aaKnown RBP14.57□□□□□ -0.08
PTPN1-202ENST00000541713 RGS16O15492 202 aaPredicted RBP14.57□□□□□ -0.08
PTPN1-202ENST00000541713 DDX3YO15523 660 aaKnown RBP14.57□□□□□ -0.08
PTPN1-202ENST00000541713 PRKCIP41743 596 aa14.57□□□□□ -0.08
PTPN1-202ENST00000541713 GPC5P78333 572 aa14.57□□□□□ -0.08
PTPN1-202ENST00000541713 ITIH3Q06033 890 aa14.57□□□□□ -0.08
PTPN1-202ENST00000541713 BSNDQ8WZ55 320 aa14.57□□□□□ -0.08
PTPN1-202ENST00000541713 RNF25Q96BH1 459 aaPredicted RBP14.57□□□□□ -0.08
PTPN1-202ENST00000541713 C11orf70Q9BRQ4 267 aa14.57□□□□□ -0.08
PTPN1-202ENST00000541713 EHMT1Q9H9B1 1298 aa14.57□□□□□ -0.08
PTPN1-202ENST00000541713 A0A087WUV0 522 aaPredicted RBP14.56□□□□□ -0.08
PTPN1-202ENST00000541713 ANKRD62A6NC57 917 aa14.56□□□□□ -0.08
PTPN1-202ENST00000541713 LRRIQ4A6NIV6 560 aa14.56□□□□□ -0.08
PTPN1-202ENST00000541713 CCNE2O96020 404 aa14.56□□□□□ -0.08
PTPN1-202ENST00000541713 HSPA9P38646 679 aaKnown RBP14.56□□□□□ -0.08
PTPN1-202ENST00000541713 CCDC121Q6ZUS5 278 aa14.56□□□□□ -0.08
PTPN1-202ENST00000541713 UBL4BQ8N7F7 174 aa14.56□□□□□ -0.08
PTPN1-202ENST00000541713 HES6Q96HZ4 224 aa14.56□□□□□ -0.08
PTPN1-202ENST00000541713 MYH11P35749 1972 aa14.56□□□□□ -0.08
PTPN1-202ENST00000541713 TMEM253P0C7T8 217 aa14.56□□□□□ -0.08
PTPN1-202ENST00000541713 DPEP1P16444 411 aa14.56□□□□□ -0.08
PTPN1-202ENST00000541713 MARK3P27448 753 aa14.56□□□□□ -0.08
PTPN1-202ENST00000541713 E2F5Q15329 346 aa14.56□□□□□ -0.08
PTPN1-202ENST00000541713 ATP13A4Q4VNC1 1196 aa14.56□□□□□ -0.08
PTPN1-202ENST00000541713 ZBTB33Q86T24 672 aa14.56□□□□□ -0.08
PTPN1-202ENST00000541713 PRELID2Q8N945 189 aa14.56□□□□□ -0.08
PTPN1-202ENST00000541713 ZBTB10Q96DT7 871 aa14.56□□□□□ -0.08
PTPN1-202ENST00000541713 CYFIP2Q96F07 1278 aa14.56□□□□□ -0.08
PTPN1-202ENST00000541713 ELAC2Q9BQ52 826 aaKnown RBP14.56□□□□□ -0.08
PTPN1-202ENST00000541713 ERP44Q9BS26 406 aa14.56□□□□□ -0.08
PTPN1-202ENST00000541713 WNT10BO00744 389 aa14.56□□□□□ -0.08
PTPN1-202ENST00000541713 ENTPD3O75355 529 aa14.56□□□□□ -0.08
PTPN1-202ENST00000541713 ZBTB7AO95365 584 aa14.56□□□□□ -0.08
PTPN1-202ENST00000541713 PMS2P54278 862 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms