RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 NLRP11P59045 1033 aaKnown RBP16.23■□□□□ 0.19
HMGA2-210ENST00000541363 CACNB1Q02641 598 aaPredicted RBP16.23■□□□□ 0.19
HMGA2-210ENST00000541363 KRT24Q2M2I5 525 aa16.23■□□□□ 0.19
HMGA2-210ENST00000541363 POTEAQ6S8J7 498 aa16.23■□□□□ 0.19
HMGA2-210ENST00000541363 MRGBPQ9NV56 204 aa16.23■□□□□ 0.19
HMGA2-210ENST00000541363 HIST1H2AGP0C0S8 130 aaPredicted RBP16.23■□□□□ 0.19
HMGA2-210ENST00000541363 HIST1H2ADP20671 130 aa16.23■□□□□ 0.19
HMGA2-210ENST00000541363 ANKRD40Q6AI12 368 aa16.23■□□□□ 0.19
HMGA2-210ENST00000541363 KIAA0825Q8IV33 1275 aa16.23■□□□□ 0.19
HMGA2-210ENST00000541363 CDKL3Q8IVW4 592 aaPredicted RBP16.23■□□□□ 0.19
HMGA2-210ENST00000541363 HIST1H2AHQ96KK5 128 aa16.23■□□□□ 0.19
HMGA2-210ENST00000541363 HIST1H2AJQ99878 128 aa16.23■□□□□ 0.19
HMGA2-210ENST00000541363 H2AFJQ9BTM1 129 aa16.23■□□□□ 0.19
HMGA2-210ENST00000541363 FANCEQ9HB96 536 aa16.23■□□□□ 0.19
HMGA2-210ENST00000541363 IP6K2Q9UHH9 426 aa16.23■□□□□ 0.19
HMGA2-210ENST00000541363 CARMIL3Q8ND23 1372 aa16.23■□□□□ 0.19
HMGA2-210ENST00000541363 RPS8P62241 208 aaKnown RBP16.23■□□□□ 0.19
HMGA2-210ENST00000541363 SPICE1Q8N0Z3 855 aa16.23■□□□□ 0.19
HMGA2-210ENST00000541363 ZNF513Q8N8E2 541 aaPredicted RBP16.23■□□□□ 0.19
HMGA2-210ENST00000541363 HPS4Q9NQG7 708 aa16.23■□□□□ 0.19
HMGA2-210ENST00000541363 NRBP1Q9UHY1 535 aa16.23■□□□□ 0.19
HMGA2-210ENST00000541363 ARL2BPQ9Y2Y0 163 aa16.23■□□□□ 0.19
HMGA2-210ENST00000541363 KLC4Q9NSK0 619 aa16.22■□□□□ 0.19
HMGA2-210ENST00000541363 MBD2Q9UBB5 411 aa16.22■□□□□ 0.19
HMGA2-210ENST00000541363 ADAM30Q9UKF2 790 aa16.22■□□□□ 0.19
HMGA2-210ENST00000541363 STAP1Q9ULZ2 295 aa16.22■□□□□ 0.19
HMGA2-210ENST00000541363 EFHC2Q5JST6 749 aa16.22■□□□□ 0.19
HMGA2-210ENST00000541363 ADCK2Q7Z695 626 aa16.22■□□□□ 0.19
HMGA2-210ENST00000541363 ASAP3Q8TDY4 903 aa16.22■□□□□ 0.19
HMGA2-210ENST00000541363 TTC7AQ9ULT0 858 aaPredicted RBP16.22■□□□□ 0.19
HMGA2-210ENST00000541363 CEBPAP49715 358 aaPredicted RBP16.22■□□□□ 0.19
HMGA2-210ENST00000541363 SUPT20HL1Q3ZLR7 823 aa16.22■□□□□ 0.19
HMGA2-210ENST00000541363 BEST2Q8NFU1 509 aa16.22■□□□□ 0.19
HMGA2-210ENST00000541363 DDI1Q8WTU0 396 aa16.22■□□□□ 0.19
HMGA2-210ENST00000541363 MLXIPLQ9NP71 852 aa16.22■□□□□ 0.19
HMGA2-210ENST00000541363 CNOT8Q9UFF9 292 aaKnown RBP16.22■□□□□ 0.19
HMGA2-210ENST00000541363 PCF11O94913 1555 aaKnown RBP16.22■□□□□ 0.19
HMGA2-210ENST00000541363 DENND3A2RUS2 1198 aa16.22■□□□□ 0.19
HMGA2-210ENST00000541363 NME3Q13232 169 aa16.22■□□□□ 0.19
HMGA2-210ENST00000541363 P3H2Q8IVL5 708 aa16.22■□□□□ 0.19
HMGA2-210ENST00000541363 POLR3AO14802 1390 aaPredicted RBP16.22■□□□□ 0.19
HMGA2-210ENST00000541363 RGS5O15539 181 aa16.22■□□□□ 0.19
HMGA2-210ENST00000541363 GGCXP38435 758 aa16.22■□□□□ 0.19
HMGA2-210ENST00000541363 KLC1Q07866 573 aa16.22■□□□□ 0.19
HMGA2-210ENST00000541363 PHKG1Q16816 387 aa16.22■□□□□ 0.19
HMGA2-210ENST00000541363 DNAL1Q4LDG9 190 aa16.22■□□□□ 0.19
HMGA2-210ENST00000541363 PRUNE1Q86TP1 453 aa16.22■□□□□ 0.19
HMGA2-210ENST00000541363 PASD1Q8IV76 773 aa16.22■□□□□ 0.19
HMGA2-210ENST00000541363 IP6K1Q92551 441 aa16.22■□□□□ 0.19
HMGA2-210ENST00000541363 ZSWIM6Q9HCJ5 1215 aa16.22■□□□□ 0.19
HMGA2-210ENST00000541363 SNX24Q9Y343 169 aa16.22■□□□□ 0.19
HMGA2-210ENST00000541363 NPATQ14207 1427 aa16.22■□□□□ 0.19
HMGA2-210ENST00000541363 BRAFP15056 766 aa16.21■□□□□ 0.19
HMGA2-210ENST00000541363 ZNF235Q14590 738 aa16.21■□□□□ 0.19
HMGA2-210ENST00000541363 TRIM16LQ309B1 348 aa16.21■□□□□ 0.19
HMGA2-210ENST00000541363 NLRP14Q86W24 1093 aa16.21■□□□□ 0.19
HMGA2-210ENST00000541363 TMEM35BQ8NCS4 154 aa16.21■□□□□ 0.19
HMGA2-210ENST00000541363 GIMAP8Q8ND71 665 aaPredicted RBP16.21■□□□□ 0.19
HMGA2-210ENST00000541363 TBCKQ8TEA7 893 aa16.21■□□□□ 0.19
HMGA2-210ENST00000541363 DOK7Q18PE1 504 aa16.21■□□□□ 0.19
HMGA2-210ENST00000541363 CNPY4Q8N129 248 aa16.21■□□□□ 0.19
HMGA2-210ENST00000541363 TSPAN17Q96FV3 270 aa16.21■□□□□ 0.19
HMGA2-210ENST00000541363 TOPORSQ9NS56 1045 aaPredicted RBP16.21■□□□□ 0.19
HMGA2-210ENST00000541363 RAD18Q9NS91 495 aa16.21■□□□□ 0.19
HMGA2-210ENST00000541363 ATP10DQ9P241 1426 aa16.21■□□□□ 0.19
HMGA2-210ENST00000541363 ASMTLO95671 621 aa16.21■□□□□ 0.19
HMGA2-210ENST00000541363 PDIA2Q13087 525 aaKnown RBP16.21■□□□□ 0.19
HMGA2-210ENST00000541363 NDUFA5Q16718 116 aa16.21■□□□□ 0.19
HMGA2-210ENST00000541363 ARMCX4Q5H9R4 360 aa16.21■□□□□ 0.19
HMGA2-210ENST00000541363 RABGAP1LQ5R372 815 aa16.21■□□□□ 0.19
HMGA2-210ENST00000541363 CCDC24Q8N4L8 307 aa16.21■□□□□ 0.19
HMGA2-210ENST00000541363 HEMGNQ9BXL5 484 aa16.21■□□□□ 0.19
HMGA2-210ENST00000541363 SOAT1P35610 550 aa16.21■□□□□ 0.19
HMGA2-210ENST00000541363 APLFQ8IW19 511 aaPredicted RBP16.21■□□□□ 0.19
HMGA2-210ENST00000541363 BFARQ9NZS9 450 aa16.21■□□□□ 0.19
HMGA2-210ENST00000541363 ALKBH5Q6P6C2 394 aaKnown RBP16.21■□□□□ 0.19
HMGA2-210ENST00000541363 SLC30A9Q6PML9 568 aa16.21■□□□□ 0.19
HMGA2-210ENST00000541363 EXD1Q8NHP7 514 aa16.21■□□□□ 0.19
HMGA2-210ENST00000541363 RNF26Q9BY78 433 aaPredicted RBP16.21■□□□□ 0.19
HMGA2-210ENST00000541363 KIAA1586Q9HCI6 787 aa16.21■□□□□ 0.19
HMGA2-210ENST00000541363 UBN2Q6ZU65 1347 aa16.21■□□□□ 0.19
HMGA2-210ENST00000541363 SNTNA6NMZ2 147 aa16.21■□□□□ 0.18
HMGA2-210ENST00000541363 KCNA3P22001 575 aa16.21■□□□□ 0.18
HMGA2-210ENST00000541363 HOXC9P31274 260 aa16.21■□□□□ 0.18
HMGA2-210ENST00000541363 SLC27A3Q5K4L6 730 aa16.21■□□□□ 0.18
HMGA2-210ENST00000541363 DDX53Q86TM3 631 aaKnown RBP16.21■□□□□ 0.18
HMGA2-210ENST00000541363 SLC52A2Q9HAB3 445 aa16.21■□□□□ 0.18
HMGA2-210ENST00000541363 APPL1Q9UKG1 709 aa16.21■□□□□ 0.18
HMGA2-210ENST00000541363 IQGAP2Q13576 1575 aa16.21■□□□□ 0.18
HMGA2-210ENST00000541363 SCRN1Q12765 414 aa16.2■□□□□ 0.18
HMGA2-210ENST00000541363 C11orf88Q6PI97 169 aa16.2■□□□□ 0.18
HMGA2-210ENST00000541363 PRDM5Q9NQX1 630 aaPredicted RBP16.2■□□□□ 0.18
HMGA2-210ENST00000541363 PSMD3O43242 534 aa16.2■□□□□ 0.18
HMGA2-210ENST00000541363 HSPA9P38646 679 aaKnown RBP16.2■□□□□ 0.18
HMGA2-210ENST00000541363 GPC3P51654 580 aa16.2■□□□□ 0.18
HMGA2-210ENST00000541363 RASGRF1Q13972 1273 aa16.2■□□□□ 0.18
HMGA2-210ENST00000541363 NDST4Q9H3R1 872 aa16.2■□□□□ 0.18
HMGA2-210ENST00000541363 IMPAD1Q9NX62 359 aa16.2■□□□□ 0.18
HMGA2-210ENST00000541363 C6orf10Q5SRN2 563 aa16.2■□□□□ 0.18
HMGA2-210ENST00000541363 WLSQ5T9L3 541 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms