RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 PNMA2Q9UL42 364 aa10.3□□□□□ -0.76
CNOT4-212ENST00000541284 ZNF536O15090 1300 aa10.3□□□□□ -0.76
CNOT4-212ENST00000541284 PMM2O15305 246 aa10.3□□□□□ -0.76
CNOT4-212ENST00000541284 SGPL1O95470 568 aa10.3□□□□□ -0.76
CNOT4-212ENST00000541284 RFX1P22670 979 aa10.3□□□□□ -0.76
CNOT4-212ENST00000541284 ZNF76P36508 570 aa10.3□□□□□ -0.76
CNOT4-212ENST00000541284 ANKRD20A8PQ5CZ79 823 aa10.3□□□□□ -0.76
CNOT4-212ENST00000541284 SLC16A10Q8TF71 515 aa10.3□□□□□ -0.76
CNOT4-212ENST00000541284 CNKSR1Q969H4 720 aa10.3□□□□□ -0.76
CNOT4-212ENST00000541284 FAM129AQ9BZQ8 928 aa10.3□□□□□ -0.76
CNOT4-212ENST00000541284 GRIN3BO60391 1043 aa10.29□□□□□ -0.76
CNOT4-212ENST00000541284 GAS7O60861 476 aa10.29□□□□□ -0.76
CNOT4-212ENST00000541284 FTLP02792 175 aaPredicted RBP10.29□□□□□ -0.76
CNOT4-212ENST00000541284 ADRB2P07550 413 aa10.29□□□□□ -0.76
CNOT4-212ENST00000541284 HSD17B4P51659 736 aa10.29□□□□□ -0.76
CNOT4-212ENST00000541284 KRT71Q3SY84 523 aa10.29□□□□□ -0.76
CNOT4-212ENST00000541284 RBM26Q5T8P6 1007 aaKnown RBP10.29□□□□□ -0.76
CNOT4-212ENST00000541284 FAM228AQ86W67 206 aa10.29□□□□□ -0.76
CNOT4-212ENST00000541284 FAM71AQ8IYT1 594 aa10.29□□□□□ -0.76
CNOT4-212ENST00000541284 CCT6BQ92526 530 aa10.29□□□□□ -0.76
CNOT4-212ENST00000541284 SEMA4DQ92854 862 aa10.29□□□□□ -0.76
CNOT4-212ENST00000541284 CENPHQ9H3R5 247 aa10.29□□□□□ -0.76
CNOT4-212ENST00000541284 AAASQ9NRG9 546 aa10.29□□□□□ -0.76
CNOT4-212ENST00000541284 SNX24Q9Y343 169 aa10.29□□□□□ -0.76
CNOT4-212ENST00000541284 PYGMP11217 842 aa10.29□□□□□ -0.76
CNOT4-212ENST00000541284 TNFAIP3P21580 790 aa10.29□□□□□ -0.76
CNOT4-212ENST00000541284 FMO1Q01740 532 aa10.29□□□□□ -0.76
CNOT4-212ENST00000541284 ZNF746Q6NUN9 644 aaPredicted RBP10.29□□□□□ -0.76
CNOT4-212ENST00000541284 RHOT2Q8IXI1 618 aa10.29□□□□□ -0.76
CNOT4-212ENST00000541284 PSPC1Q8WXF1 523 aaKnown RBP10.29□□□□□ -0.76
CNOT4-212ENST00000541284 DDX1Q92499 740 aaKnown RBP10.29□□□□□ -0.76
CNOT4-212ENST00000541284 XPO6Q96QU8 1125 aaKnown RBP10.29□□□□□ -0.76
CNOT4-212ENST00000541284 ZNF577Q9BSK1 485 aa10.29□□□□□ -0.76
CNOT4-212ENST00000541284 TMEM109Q9BVC6 243 aa10.29□□□□□ -0.76
CNOT4-212ENST00000541284 RAB17Q9H0T7 212 aa10.29□□□□□ -0.76
CNOT4-212ENST00000541284 FRMD4BQ9Y2L6 1034 aa10.29□□□□□ -0.76
CNOT4-212ENST00000541284 GOLGA6L10A6NI86 522 aa10.29□□□□□ -0.76
CNOT4-212ENST00000541284 ATMINO43313 823 aaPredicted RBP10.29□□□□□ -0.76
CNOT4-212ENST00000541284 POLR2MP0CAP2 368 aa10.29□□□□□ -0.76
CNOT4-212ENST00000541284 COMTP21964 271 aa10.29□□□□□ -0.76
CNOT4-212ENST00000541284 SMTNP53814 917 aa10.29□□□□□ -0.76
CNOT4-212ENST00000541284 PMS2P54278 862 aa10.29□□□□□ -0.76
CNOT4-212ENST00000541284 EIF3BP55884 814 aaKnown RBP10.29□□□□□ -0.76
CNOT4-212ENST00000541284 IFI35P80217 286 aaPredicted RBP10.29□□□□□ -0.76
CNOT4-212ENST00000541284 IKQ13123 557 aaPredicted RBP10.29□□□□□ -0.76
CNOT4-212ENST00000541284 DRP2Q13474 957 aa10.29□□□□□ -0.76
CNOT4-212ENST00000541284 RSBN1LQ6PCB5 846 aaPredicted RBP10.29□□□□□ -0.76
CNOT4-212ENST00000541284 CCDC174Q6PII3 467 aa10.29□□□□□ -0.76
CNOT4-212ENST00000541284 RPUSD2Q8IZ73 545 aaKnown RBP10.29□□□□□ -0.76
CNOT4-212ENST00000541284 RDH13Q8NBN7 331 aa10.29□□□□□ -0.76
CNOT4-212ENST00000541284 RPS6KC1Q96S38 1066 aa10.29□□□□□ -0.76
CNOT4-212ENST00000541284 TMEM117Q9H0C3 514 aa10.29□□□□□ -0.76
CNOT4-212ENST00000541284 SEMA4AQ9H3S1 761 aa10.29□□□□□ -0.76
CNOT4-212ENST00000541284 PCIF1Q9H4Z3 704 aa10.29□□□□□ -0.76
CNOT4-212ENST00000541284 UBE2TQ9NPD8 197 aaPredicted RBP10.29□□□□□ -0.76
CNOT4-212ENST00000541284 CYP1A2P05177 515 aa10.28□□□□□ -0.76
CNOT4-212ENST00000541284 MAPTP10636 758 aaKnown RBP10.28□□□□□ -0.76
CNOT4-212ENST00000541284 ADSSP30520 456 aa10.28□□□□□ -0.76
CNOT4-212ENST00000541284 AOC3Q16853 763 aa10.28□□□□□ -0.76
CNOT4-212ENST00000541284 HS2ST1Q7LGA3 356 aa10.28□□□□□ -0.76
CNOT4-212ENST00000541284 C12orf50Q8NA57 414 aaPredicted RBP10.28□□□□□ -0.76
CNOT4-212ENST00000541284 ART4Q93070 314 aa10.28□□□□□ -0.76
CNOT4-212ENST00000541284 CSRNP1Q96S65 589 aa10.28□□□□□ -0.76
CNOT4-212ENST00000541284 MXRA8Q9BRK3 442 aa10.28□□□□□ -0.76
CNOT4-212ENST00000541284 HERPUD2Q9BSE4 406 aa10.28□□□□□ -0.76
CNOT4-212ENST00000541284 GLIS2Q9BZE0 524 aaPredicted RBP10.28□□□□□ -0.76
CNOT4-212ENST00000541284 WDR11Q9BZH6 1224 aa10.28□□□□□ -0.76
CNOT4-212ENST00000541284 ST6GALNAC4Q9H4F1 302 aa10.28□□□□□ -0.76
CNOT4-212ENST00000541284 FBXO28Q9NVF7 368 aa10.28□□□□□ -0.76
CNOT4-212ENST00000541284 PLXNA1Q9UIW2 1896 aa10.28□□□□□ -0.76
CNOT4-212ENST00000541284 IPO5O00410 1097 aaKnown RBP10.28□□□□□ -0.76
CNOT4-212ENST00000541284 P4HA2O15460 535 aa10.28□□□□□ -0.76
CNOT4-212ENST00000541284 VAMP7P51809 220 aa10.28□□□□□ -0.76
CNOT4-212ENST00000541284 PADI6Q6TGC4 694 aa10.28□□□□□ -0.76
CNOT4-212ENST00000541284 PIGWQ7Z7B1 504 aa10.28□□□□□ -0.76
CNOT4-212ENST00000541284 FAM83AQ86UY5 434 aa10.28□□□□□ -0.76
CNOT4-212ENST00000541284 BTBD6Q96KE9 485 aa10.28□□□□□ -0.76
CNOT4-212ENST00000541284 RIT2Q99578 217 aa10.28□□□□□ -0.76
CNOT4-212ENST00000541284 CCDC134Q9H6E4 229 aa10.28□□□□□ -0.76
CNOT4-212ENST00000541284 SLC40A1Q9NP59 571 aa10.28□□□□□ -0.76
CNOT4-212ENST00000541284 BCCIPQ9P287 314 aaKnown RBP eCLIP10.28□□□□□ -0.76
CNOT4-212ENST00000541284 PFASO15067 1338 aa10.28□□□□□ -0.76
CNOT4-212ENST00000541284 SYNGAP1Q96PV0 1343 aa10.28□□□□□ -0.76
CNOT4-212ENST00000541284 TMEM150BA6NC51 233 aa10.27□□□□□ -0.76
CNOT4-212ENST00000541284 EXOC3O60645 756 aa10.27□□□□□ -0.76
CNOT4-212ENST00000541284 BCRP11274 1271 aa10.27□□□□□ -0.76
CNOT4-212ENST00000541284 GCLMP48507 274 aa10.27□□□□□ -0.76
CNOT4-212ENST00000541284 RARRES1P49788 294 aa10.27□□□□□ -0.76
CNOT4-212ENST00000541284 RBM5P52756 815 aaKnown RBP eCLIP10.27□□□□□ -0.76
CNOT4-212ENST00000541284 GTF2BQ00403 316 aa10.27□□□□□ -0.76
CNOT4-212ENST00000541284 SLC29A2Q14542 456 aa10.27□□□□□ -0.76
CNOT4-212ENST00000541284 UGCGQ16739 394 aa10.27□□□□□ -0.76
CNOT4-212ENST00000541284 RHBDF2Q6PJF5 856 aa10.27□□□□□ -0.76
CNOT4-212ENST00000541284 MICALCLQ6ZW33 695 aa10.27□□□□□ -0.76
CNOT4-212ENST00000541284 HELQQ8TDG4 1101 aa10.27□□□□□ -0.76
CNOT4-212ENST00000541284 IPO4Q8TEX9 1081 aaKnown RBP10.27□□□□□ -0.76
CNOT4-212ENST00000541284 CLEC4DQ8WXI8 215 aa10.27□□□□□ -0.76
CNOT4-212ENST00000541284 ZBTB21Q9ULJ3 1066 aa10.27□□□□□ -0.76
CNOT4-212ENST00000541284 TRPC6Q9Y210 931 aa10.27□□□□□ -0.76
CNOT4-212ENST00000541284 ZHX2Q9Y6X8 837 aa10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms