RNA–Protein interactions for RNA: ENST00000541242.1

AC005840.4-201, humanhuman

BASIC

Gene AC005840.4, Length 2,494 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.4-201ENST00000541242 CPSF2Q9P2I0 782 aaKnown RBP15.96■□□□□ 0.15
AC005840.4-201ENST00000541242 MTRF1LQ9UGC7 380 aaKnown RBP15.96■□□□□ 0.15
AC005840.4-201ENST00000541242 ARFGEF1Q9Y6D6 1849 aa15.95■□□□□ 0.14
AC005840.4-201ENST00000541242 PHF2O75151 1096 aa15.95■□□□□ 0.14
AC005840.4-201ENST00000541242 MMP10P09238 476 aa15.95■□□□□ 0.14
AC005840.4-201ENST00000541242 NEFHP12036 1026 aa15.95■□□□□ 0.14
AC005840.4-201ENST00000541242 CYP11B2P19099 503 aa15.95■□□□□ 0.14
AC005840.4-201ENST00000541242 APOBEC3HQ6NTF7 200 aaKnown RBP15.95■□□□□ 0.14
AC005840.4-201ENST00000541242 ZFPM1Q8IX07 1006 aa15.95■□□□□ 0.14
AC005840.4-201ENST00000541242 SLC30A5Q8TAD4 765 aa15.95■□□□□ 0.14
AC005840.4-201ENST00000541242 CTNNBL1Q8WYA6 563 aaPredicted RBP15.95■□□□□ 0.14
AC005840.4-201ENST00000541242 PAPOLBQ9NRJ5 636 aaKnown RBP15.95■□□□□ 0.14
AC005840.4-201ENST00000541242 TBK1Q9UHD2 729 aa15.95■□□□□ 0.14
AC005840.4-201ENST00000541242 PCDHA3Q9Y5H8 950 aa15.95■□□□□ 0.14
AC005840.4-201ENST00000541242 PLIN4Q96Q06 1357 aa15.95■□□□□ 0.14
AC005840.4-201ENST00000541242 PEX11AO75192 247 aa15.95■□□□□ 0.14
AC005840.4-201ENST00000541242 CCNB1P14635 433 aa15.95■□□□□ 0.14
AC005840.4-201ENST00000541242 TARSP26639 723 aaKnown RBP15.95■□□□□ 0.14
AC005840.4-201ENST00000541242 PAPOLAP51003 745 aaKnown RBP15.95■□□□□ 0.14
AC005840.4-201ENST00000541242 MXRA7P84157 204 aa15.95■□□□□ 0.14
AC005840.4-201ENST00000541242 NFIAQ12857 509 aa15.95■□□□□ 0.14
AC005840.4-201ENST00000541242 ARSHQ5FYA8 562 aa15.95■□□□□ 0.14
AC005840.4-201ENST00000541242 BTNL9Q6UXG8 535 aa15.95■□□□□ 0.14
AC005840.4-201ENST00000541242 ZC3H3Q8IXZ2 948 aaKnown RBP15.95■□□□□ 0.14
AC005840.4-201ENST00000541242 MYLK2Q9H1R3 596 aa15.95■□□□□ 0.14
AC005840.4-201ENST00000541242 CDC42EP4Q9H3Q1 356 aaKnown RBP15.95■□□□□ 0.14
AC005840.4-201ENST00000541242 DDX25Q9UHL0 483 aaKnown RBP15.95■□□□□ 0.14
AC005840.4-201ENST00000541242 SUGT1Q9Y2Z0 365 aa15.95■□□□□ 0.14
AC005840.4-201ENST00000541242 COL11A2P13942 1736 aaPredicted RBP15.95■□□□□ 0.14
AC005840.4-201ENST00000541242 NRXN2Q9P2S2 1712 aa15.95■□□□□ 0.14
AC005840.4-201ENST00000541242 AHCYL1O43865 530 aa15.94■□□□□ 0.14
AC005840.4-201ENST00000541242 UNC5CO95185 931 aa15.94■□□□□ 0.14
AC005840.4-201ENST00000541242 SMARCA1P28370 1054 aa15.94■□□□□ 0.14
AC005840.4-201ENST00000541242 SHMT1P34896 483 aa15.94■□□□□ 0.14
AC005840.4-201ENST00000541242 STAT3P40763 770 aa15.94■□□□□ 0.14
AC005840.4-201ENST00000541242 DRG2P55039 364 aaKnown RBP15.94■□□□□ 0.14
AC005840.4-201ENST00000541242 KCNA1Q09470 495 aa15.94■□□□□ 0.14
AC005840.4-201ENST00000541242 CPNE8Q86YQ8 564 aa15.94■□□□□ 0.14
AC005840.4-201ENST00000541242 CKAP2Q8WWK9 683 aa15.94■□□□□ 0.14
AC005840.4-201ENST00000541242 LBHD1Q9BQE6 289 aaPredicted RBP15.94■□□□□ 0.14
AC005840.4-201ENST00000541242 TMEM109Q9BVC6 243 aa15.94■□□□□ 0.14
AC005840.4-201ENST00000541242 STMN4Q9H169 189 aaPredicted RBP15.94■□□□□ 0.14
AC005840.4-201ENST00000541242 DBNDD1Q9H9R9 158 aa15.94■□□□□ 0.14
AC005840.4-201ENST00000541242 SERPINB13Q9UIV8 391 aa15.94■□□□□ 0.14
AC005840.4-201ENST00000541242 HAO1Q9UJM8 370 aa15.94■□□□□ 0.14
AC005840.4-201ENST00000541242 PCDHA12Q9UN75 941 aa15.94■□□□□ 0.14
AC005840.4-201ENST00000541242 PCDHB13Q9Y5F0 798 aa15.94■□□□□ 0.14
AC005840.4-201ENST00000541242 RARGP13631 454 aa15.94■□□□□ 0.14
AC005840.4-201ENST00000541242 STAT1P42224 750 aa15.94■□□□□ 0.14
AC005840.4-201ENST00000541242 ADCY7P51828 1080 aa15.94■□□□□ 0.14
AC005840.4-201ENST00000541242 CTTNQ14247 550 aaKnown RBP15.94■□□□□ 0.14
AC005840.4-201ENST00000541242 EDRF1Q3B7T1 1238 aa15.94■□□□□ 0.14
AC005840.4-201ENST00000541242 TTBK2Q6IQ55 1244 aa15.94■□□□□ 0.14
AC005840.4-201ENST00000541242 CYP4X1Q8N118 509 aa15.94■□□□□ 0.14
AC005840.4-201ENST00000541242 SUPT20HQ8NEM7 779 aa15.94■□□□□ 0.14
AC005840.4-201ENST00000541242 TTC8Q8TAM2 541 aa15.94■□□□□ 0.14
AC005840.4-201ENST00000541242 NAP1L3Q99457 506 aaPredicted RBP15.94■□□□□ 0.14
AC005840.4-201ENST00000541242 RNPEPL1Q9HAU8 725 aa15.94■□□□□ 0.14
AC005840.4-201ENST00000541242 KLHL14Q9P2G3 628 aa15.94■□□□□ 0.14
AC005840.4-201ENST00000541242 INTUQ9ULD6 942 aa15.94■□□□□ 0.14
AC005840.4-201ENST00000541242 ALG6Q9Y672 507 aa15.94■□□□□ 0.14
AC005840.4-201ENST00000541242 NCANO14594 1321 aa15.94■□□□□ 0.14
AC005840.4-201ENST00000541242 QSER1Q2KHR3 1735 aa15.94■□□□□ 0.14
AC005840.4-201ENST00000541242 POTEFA5A3E0 1075 aa15.93■□□□□ 0.14
AC005840.4-201ENST00000541242 O00370 1275 aa15.93■□□□□ 0.14
AC005840.4-201ENST00000541242 TMEM253P0C7T8 217 aa15.93■□□□□ 0.14
AC005840.4-201ENST00000541242 POTEIP0CG38 1075 aa15.93■□□□□ 0.14
AC005840.4-201ENST00000541242 SNHG28P0DPA3 235 aa15.93■□□□□ 0.14
AC005840.4-201ENST00000541242 MFSD5Q6N075 450 aa15.93■□□□□ 0.14
AC005840.4-201ENST00000541242 POTEGQ6S5H5 508 aa15.93■□□□□ 0.14
AC005840.4-201ENST00000541242 POTEEQ6S8J3 1075 aa15.93■□□□□ 0.14
AC005840.4-201ENST00000541242 FRMD5Q7Z6J6 570 aa15.93■□□□□ 0.14
AC005840.4-201ENST00000541242 CCDC105Q8IYK2 499 aa15.93■□□□□ 0.14
AC005840.4-201ENST00000541242 SLC35C1Q96A29 364 aa15.93■□□□□ 0.14
AC005840.4-201ENST00000541242 RPS6KC1Q96S38 1066 aa15.93■□□□□ 0.14
AC005840.4-201ENST00000541242 TRIM7Q9C029 511 aa15.93■□□□□ 0.14
AC005840.4-201ENST00000541242 LRRC42Q9Y546 428 aa15.93■□□□□ 0.14
AC005840.4-201ENST00000541242 MEIS1O00470 390 aa15.93■□□□□ 0.14
AC005840.4-201ENST00000541242 TPBGLP0DKB5 382 aa15.93■□□□□ 0.14
AC005840.4-201ENST00000541242 BRAFP15056 766 aa15.93■□□□□ 0.14
AC005840.4-201ENST00000541242 CALB2P22676 271 aa15.93■□□□□ 0.14
AC005840.4-201ENST00000541242 GBP1P32455 592 aa15.93■□□□□ 0.14
AC005840.4-201ENST00000541242 STX2P32856 288 aa15.93■□□□□ 0.14
AC005840.4-201ENST00000541242 CACNB3P54284 484 aa15.93■□□□□ 0.14
AC005840.4-201ENST00000541242 SHROOM1Q2M3G4 852 aaPredicted RBP15.93■□□□□ 0.14
AC005840.4-201ENST00000541242 ARMC3Q5W041 872 aa15.93■□□□□ 0.14
AC005840.4-201ENST00000541242 CWF19L1Q69YN2 538 aaKnown RBP15.93■□□□□ 0.14
AC005840.4-201ENST00000541242 SFR1Q86XK3 245 aa15.93■□□□□ 0.14
AC005840.4-201ENST00000541242 FBF1Q8TES7 1133 aa15.93■□□□□ 0.14
AC005840.4-201ENST00000541242 TEKT4Q8WW24 435 aa15.93■□□□□ 0.14
AC005840.4-201ENST00000541242 BCS1LQ9Y276 419 aa15.93■□□□□ 0.14
AC005840.4-201ENST00000541242 LRRD1A4D1F6 860 aa15.92■□□□□ 0.14
AC005840.4-201ENST00000541242 FERP16591 822 aa15.92■□□□□ 0.14
AC005840.4-201ENST00000541242 ALDH1B1P30837 517 aa15.92■□□□□ 0.14
AC005840.4-201ENST00000541242 CHKAP35790 457 aa15.92■□□□□ 0.14
AC005840.4-201ENST00000541242 RPS6KA3P51812 740 aa15.92■□□□□ 0.14
AC005840.4-201ENST00000541242 PSMC6P62333 389 aa15.92■□□□□ 0.14
AC005840.4-201ENST00000541242 DRAP1Q14919 205 aaPredicted RBP15.92■□□□□ 0.14
AC005840.4-201ENST00000541242 RNF220Q5VTB9 566 aa15.92■□□□□ 0.14
AC005840.4-201ENST00000541242 FAM13CQ8NE31 585 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms