RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 SLC17A8Q8NDX2 589 aa14.45□□□□□ -0.1
LTBR-208ENST00000541005 RASSF8Q8NHQ8 419 aa14.45□□□□□ -0.1
LTBR-208ENST00000541005 PPM1EQ8WY54 764 aa14.45□□□□□ -0.1
LTBR-208ENST00000541005 LARP4BQ92615 738 aaKnown RBP14.45□□□□□ -0.1
LTBR-208ENST00000541005 ZNF558Q96NG5 402 aa14.45□□□□□ -0.1
LTBR-208ENST00000541005 CLIC6Q96NY7 704 aa14.45□□□□□ -0.1
LTBR-208ENST00000541005 NXF3Q9H4D5 531 aaKnown RBP14.45□□□□□ -0.1
LTBR-208ENST00000541005 PDZD7Q9H5P4 517 aa14.45□□□□□ -0.1
LTBR-208ENST00000541005 NSUN3Q9H649 340 aaKnown RBP14.45□□□□□ -0.1
LTBR-208ENST00000541005 POLD4Q9HCU8 107 aa14.45□□□□□ -0.1
LTBR-208ENST00000541005 ALG13Q9NP73 1137 aaKnown RBP14.45□□□□□ -0.1
LTBR-208ENST00000541005 THEGQ9P2T0 379 aa14.45□□□□□ -0.1
LTBR-208ENST00000541005 CCDC39Q9UFE4 941 aa14.45□□□□□ -0.1
LTBR-208ENST00000541005 CCDC169A6NNP5 214 aa14.44□□□□□ -0.1
LTBR-208ENST00000541005 FGF18O76093 207 aa14.44□□□□□ -0.1
LTBR-208ENST00000541005 BRD1O95696 1058 aa14.44□□□□□ -0.1
LTBR-208ENST00000541005 ITGA4P13612 1032 aa14.44□□□□□ -0.1
LTBR-208ENST00000541005 DNAJB1P25685 340 aa14.44□□□□□ -0.1
LTBR-208ENST00000541005 SPECC1Q5M775 1068 aa14.44□□□□□ -0.1
LTBR-208ENST00000541005 TAS1R3Q7RTX0 852 aa14.44□□□□□ -0.1
LTBR-208ENST00000541005 GPBP1Q86WP2 473 aa14.44□□□□□ -0.1
LTBR-208ENST00000541005 SLC39A11Q8N1S5 342 aa14.44□□□□□ -0.1
LTBR-208ENST00000541005 SPRYD3Q8NCJ5 442 aa14.44□□□□□ -0.1
LTBR-208ENST00000541005 URGCPQ8TCY9 931 aa14.44□□□□□ -0.1
LTBR-208ENST00000541005 REEP2Q9BRK0 252 aa14.44□□□□□ -0.1
LTBR-208ENST00000541005 TRIM6Q9C030 488 aaPredicted RBP14.44□□□□□ -0.1
LTBR-208ENST00000541005 KMT5AQ9NQR1 393 aa14.44□□□□□ -0.1
LTBR-208ENST00000541005 PRDM6Q9NQX0 595 aa14.44□□□□□ -0.1
LTBR-208ENST00000541005 KANSL3Q9P2N6 904 aa14.44□□□□□ -0.1
LTBR-208ENST00000541005 COG5Q9UP83 839 aa14.44□□□□□ -0.1
LTBR-208ENST00000541005 GIT1Q9Y2X7 761 aa14.44□□□□□ -0.1
LTBR-208ENST00000541005 K7ERI5 159 aa14.43□□□□□ -0.1
LTBR-208ENST00000541005 NPTXRO95502 500 aa14.43□□□□□ -0.1
LTBR-208ENST00000541005 SCP2P22307 547 aa14.43□□□□□ -0.1
LTBR-208ENST00000541005 DDIT3P35638 169 aa14.43□□□□□ -0.1
LTBR-208ENST00000541005 BCAR1P56945 870 aa14.43□□□□□ -0.1
LTBR-208ENST00000541005 MCM6Q14566 821 aa14.43□□□□□ -0.1
LTBR-208ENST00000541005 DCAF4L1Q3SXM0 396 aa14.43□□□□□ -0.1
LTBR-208ENST00000541005 LONRF3Q496Y0 759 aa14.43□□□□□ -0.1
LTBR-208ENST00000541005 NT5DC1Q5TFE4 455 aa14.43□□□□□ -0.1
LTBR-208ENST00000541005 FOXD4L5Q5VV16 416 aaPredicted RBP14.43□□□□□ -0.1
LTBR-208ENST00000541005 CCDC73Q6ZRK6 1079 aa14.43□□□□□ -0.1
LTBR-208ENST00000541005 THNSL1Q8IYQ7 743 aa14.43□□□□□ -0.1
LTBR-208ENST00000541005 TMEM161BQ8NDZ6 487 aa14.43□□□□□ -0.1
LTBR-208ENST00000541005 KCNG4Q8TDN1 519 aa14.43□□□□□ -0.1
LTBR-208ENST00000541005 POF1BQ8WVV4 589 aa14.43□□□□□ -0.1
LTBR-208ENST00000541005 ATXN2LQ8WWM7 1075 aaKnown RBP14.43□□□□□ -0.1
LTBR-208ENST00000541005 FOXD4L4Q8WXT5 416 aaPredicted RBP14.43□□□□□ -0.1
LTBR-208ENST00000541005 RNF39Q9H2S5 420 aa14.43□□□□□ -0.1
LTBR-208ENST00000541005 NRDE2Q9H7Z3 1164 aa14.43□□□□□ -0.1
LTBR-208ENST00000541005 SPG21Q9NZD8 308 aa14.43□□□□□ -0.1
LTBR-208ENST00000541005 LARSQ9P2J5 1176 aaKnown RBP14.43□□□□□ -0.1
LTBR-208ENST00000541005 TFIP11Q9UBB9 837 aaKnown RBP14.43□□□□□ -0.1
LTBR-208ENST00000541005 INPP5FQ9Y2H2 1132 aa14.43□□□□□ -0.1
LTBR-208ENST00000541005 HES2Q9Y543 173 aa14.43□□□□□ -0.1
LTBR-208ENST00000541005 VWA8A3KMH1 1905 aa14.43□□□□□ -0.1
LTBR-208ENST00000541005 MTCL1Q9Y4B5 1905 aaKnown RBP14.43□□□□□ -0.1
LTBR-208ENST00000541005 NPHP3-ACAD11A0A0J9YXS1 232 aa14.42□□□□□ -0.1
LTBR-208ENST00000541005 ARL5CA6NH57 179 aa14.42□□□□□ -0.1
LTBR-208ENST00000541005 H0YCG3 227 aa14.42□□□□□ -0.1
LTBR-208ENST00000541005 FSCN2O14926 492 aa14.42□□□□□ -0.1
LTBR-208ENST00000541005 B4GALT3O60512 393 aa14.42□□□□□ -0.1
LTBR-208ENST00000541005 MAPTP10636 758 aaKnown RBP14.42□□□□□ -0.1
LTBR-208ENST00000541005 MLH1P40692 756 aa14.42□□□□□ -0.1
LTBR-208ENST00000541005 ALDH7A1P49419 539 aaKnown RBP14.42□□□□□ -0.1
LTBR-208ENST00000541005 SMTNP53814 917 aa14.42□□□□□ -0.1
LTBR-208ENST00000541005 NCKAP1LP55160 1127 aa14.42□□□□□ -0.1
LTBR-208ENST00000541005 DSC1Q08554 894 aa14.42□□□□□ -0.1
LTBR-208ENST00000541005 RAD51AP2Q09MP3 1159 aa14.42□□□□□ -0.1
LTBR-208ENST00000541005 GIT2Q14161 759 aa14.42□□□□□ -0.1
LTBR-208ENST00000541005 BECN1Q14457 450 aa14.42□□□□□ -0.1
LTBR-208ENST00000541005 TCEAL5Q5H9L2 206 aa14.42□□□□□ -0.1
LTBR-208ENST00000541005 ATF7IP2Q5U623 682 aa14.42□□□□□ -0.1
LTBR-208ENST00000541005 RRAGBQ5VZM2 374 aa14.42□□□□□ -0.1
LTBR-208ENST00000541005 EEF1DP3Q658K8 133 aa14.42□□□□□ -0.1
LTBR-208ENST00000541005 PDE12Q6L8Q7 609 aaKnown RBP14.42□□□□□ -0.1
LTBR-208ENST00000541005 APBB1IPQ7Z5R6 666 aaPredicted RBP14.42□□□□□ -0.1
LTBR-208ENST00000541005 CDR2LQ86X02 465 aaPredicted RBP14.42□□□□□ -0.1
LTBR-208ENST00000541005 MRPS27Q92552 414 aaKnown RBP14.42□□□□□ -0.1
LTBR-208ENST00000541005 GAD1Q99259 594 aa14.42□□□□□ -0.1
LTBR-208ENST00000541005 ADPGKQ9BRR6 497 aa14.42□□□□□ -0.1
LTBR-208ENST00000541005 TMEM175Q9BSA9 504 aa14.42□□□□□ -0.1
LTBR-208ENST00000541005 MRPL4Q9BYD3 311 aaKnown RBP14.42□□□□□ -0.1
LTBR-208ENST00000541005 PARVGQ9HBI0 331 aa14.42□□□□□ -0.1
LTBR-208ENST00000541005 PTPRHQ9HD43 1115 aa14.42□□□□□ -0.1
LTBR-208ENST00000541005 TLR9Q9NR96 1032 aa14.42□□□□□ -0.1
LTBR-208ENST00000541005 CFAP45Q9UL16 551 aa14.42□□□□□ -0.1
LTBR-208ENST00000541005 TNFSF13BQ9Y275 285 aa14.42□□□□□ -0.1
LTBR-208ENST00000541005 ZDHHC9Q9Y397 364 aa14.42□□□□□ -0.1
LTBR-208ENST00000541005 A0A087X0B3 334 aa14.41□□□□□ -0.1
LTBR-208ENST00000541005 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.41□□□□□ -0.1
LTBR-208ENST00000541005 SFI1A8K8P3 1242 aa14.41□□□□□ -0.1
LTBR-208ENST00000541005 SLC16A4O15374 487 aa14.41□□□□□ -0.1
LTBR-208ENST00000541005 NCK2O43639 380 aa14.41□□□□□ -0.1
LTBR-208ENST00000541005 CUTAO60888 179 aa14.41□□□□□ -0.1
LTBR-208ENST00000541005 ZC3H11AO75152 810 aaKnown RBP eCLIP14.41□□□□□ -0.1
LTBR-208ENST00000541005 GALTP07902 379 aa14.41□□□□□ -0.1
LTBR-208ENST00000541005 PROZP22891 400 aa14.41□□□□□ -0.1
LTBR-208ENST00000541005 PBX3P40426 434 aa14.41□□□□□ -0.1
LTBR-208ENST00000541005 AFF1P51825 1210 aaKnown RBP14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms