RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 BICDL2A1A5D9 508 aa9.26□□□□□ -0.93
CHD4-208ENST00000540960 FAM205CA6NFA0 338 aa9.26□□□□□ -0.93
CHD4-208ENST00000540960 HIDE1A8MVS5 230 aa9.26□□□□□ -0.93
CHD4-208ENST00000540960 ENPP3O14638 875 aa9.26□□□□□ -0.93
CHD4-208ENST00000540960 TM4SF5O14894 197 aa9.26□□□□□ -0.93
CHD4-208ENST00000540960 FSCN2O14926 492 aa9.26□□□□□ -0.93
CHD4-208ENST00000540960 NKRFO15226 690 aaKnown RBP eCLIP9.26□□□□□ -0.93
CHD4-208ENST00000540960 LILRB5O75023 590 aa9.26□□□□□ -0.93
CHD4-208ENST00000540960 ICAM1P05362 532 aa9.26□□□□□ -0.93
CHD4-208ENST00000540960 TPM2P07951 284 aa9.26□□□□□ -0.93
CHD4-208ENST00000540960 CDK11BP21127 795 aaKnown RBP9.26□□□□□ -0.93
CHD4-208ENST00000540960 GATMP50440 423 aa9.26□□□□□ -0.93
CHD4-208ENST00000540960 ZNF75DP51815 510 aa9.26□□□□□ -0.93
CHD4-208ENST00000540960 CSTF1Q05048 431 aaKnown RBP9.26□□□□□ -0.93
CHD4-208ENST00000540960 PSMD2Q13200 908 aa9.26□□□□□ -0.93
CHD4-208ENST00000540960 PNOCQ13519 176 aa9.26□□□□□ -0.93
CHD4-208ENST00000540960 MFSD10Q14728 455 aa9.26□□□□□ -0.93
CHD4-208ENST00000540960 KIAA0753Q2KHM9 967 aa9.26□□□□□ -0.93
CHD4-208ENST00000540960 CNNM4Q6P4Q7 775 aa9.26□□□□□ -0.93
CHD4-208ENST00000540960 NIPA1Q7RTP0 329 aa9.26□□□□□ -0.93
CHD4-208ENST00000540960 SERINC5Q86VE9 423 aa9.26□□□□□ -0.93
CHD4-208ENST00000540960 PDILTQ8N807 584 aa9.26□□□□□ -0.93
CHD4-208ENST00000540960 ZBTB44Q8NCP5 570 aa9.26□□□□□ -0.93
CHD4-208ENST00000540960 RASGRP4Q8TDF6 673 aa9.26□□□□□ -0.93
CHD4-208ENST00000540960 RSAD2Q8WXG1 361 aa9.26□□□□□ -0.93
CHD4-208ENST00000540960 CDCA3Q99618 268 aaPredicted RBP9.26□□□□□ -0.93
CHD4-208ENST00000540960 FOXQ1Q9C009 403 aa9.26□□□□□ -0.93
CHD4-208ENST00000540960 WNT16Q9UBV4 365 aa9.26□□□□□ -0.93
CHD4-208ENST00000540960 TCEAL9Q9UHQ7 104 aa9.26□□□□□ -0.93
CHD4-208ENST00000540960 MAN1B1Q9UKM7 699 aa9.26□□□□□ -0.93
CHD4-208ENST00000540960 TCHHQ07283 1943 aa9.26□□□□□ -0.93
CHD4-208ENST00000540960 MYO18BQ8IUG5 2567 aa9.25□□□□□ -0.93
CHD4-208ENST00000540960 LAMA5O15230 3695 aa9.25□□□□□ -0.93
CHD4-208ENST00000540960 B4DLN1 442 aa9.25□□□□□ -0.93
CHD4-208ENST00000540960 HAS3O00219 553 aa9.25□□□□□ -0.93
CHD4-208ENST00000540960 PSMA7O14818 248 aa9.25□□□□□ -0.93
CHD4-208ENST00000540960 EOMESO95936 686 aa9.25□□□□□ -0.93
CHD4-208ENST00000540960 SERPINC1P01008 464 aa9.25□□□□□ -0.93
CHD4-208ENST00000540960 ZNF286BP0CG31 522 aa9.25□□□□□ -0.93
CHD4-208ENST00000540960 HOXB8P17481 243 aaPredicted RBP9.25□□□□□ -0.93
CHD4-208ENST00000540960 RFX1P22670 979 aa9.25□□□□□ -0.93
CHD4-208ENST00000540960 TXKP42681 527 aa9.25□□□□□ -0.93
CHD4-208ENST00000540960 ARHGAP4P98171 946 aa9.25□□□□□ -0.93
CHD4-208ENST00000540960 DPYDQ12882 1025 aa9.25□□□□□ -0.93
CHD4-208ENST00000540960 BAATQ14032 418 aaPredicted RBP9.25□□□□□ -0.93
CHD4-208ENST00000540960 E2F4Q16254 413 aa9.25□□□□□ -0.93
CHD4-208ENST00000540960 TPD52L1Q16890 204 aaPredicted RBP9.25□□□□□ -0.93
CHD4-208ENST00000540960 LY6KQ17RY6 165 aa9.25□□□□□ -0.93
CHD4-208ENST00000540960 ZNF528Q3MIS6 628 aa9.25□□□□□ -0.93
CHD4-208ENST00000540960 DPCR1Q3MIW9 517 aa9.25□□□□□ -0.93
CHD4-208ENST00000540960 ZNF658Q5TYW1 1059 aaPredicted RBP9.25□□□□□ -0.93
CHD4-208ENST00000540960 SPATA1Q5VX52 437 aa9.25□□□□□ -0.93
CHD4-208ENST00000540960 PLPP4Q5VZY2 271 aa9.25□□□□□ -0.93
CHD4-208ENST00000540960 CES5AQ6NT32 575 aa9.25□□□□□ -0.93
CHD4-208ENST00000540960 PDXDC2PQ6P474 469 aa9.25□□□□□ -0.93
CHD4-208ENST00000540960 FOXR2Q6PJQ5 311 aa9.25□□□□□ -0.93
CHD4-208ENST00000540960 C19orf48Q6RUI8 117 aa9.25□□□□□ -0.93
CHD4-208ENST00000540960 TSSK4Q6SA08 328 aa9.25□□□□□ -0.93
CHD4-208ENST00000540960 PLA2G4DQ86XP0 818 aa9.25□□□□□ -0.93
CHD4-208ENST00000540960 FAM114A1Q8IWE2 563 aa9.25□□□□□ -0.93
CHD4-208ENST00000540960 DHX40Q8IX18 779 aaKnown RBP9.25□□□□□ -0.93
CHD4-208ENST00000540960 PLCD3Q8N3E9 789 aa9.25□□□□□ -0.93
CHD4-208ENST00000540960 AOPEPQ8N6M6 819 aa9.25□□□□□ -0.93
CHD4-208ENST00000540960 GATA6Q92908 595 aa9.25□□□□□ -0.93
CHD4-208ENST00000540960 DHTKD1Q96HY7 919 aaPredicted RBP9.25□□□□□ -0.93
CHD4-208ENST00000540960 NECTIN4Q96NY8 510 aa9.25□□□□□ -0.93
CHD4-208ENST00000540960 C7orf25Q9BPX7 421 aa9.25□□□□□ -0.93
CHD4-208ENST00000540960 CPVLQ9H3G5 476 aa9.25□□□□□ -0.93
CHD4-208ENST00000540960 KBTBD4Q9NVX7 518 aa9.25□□□□□ -0.93
CHD4-208ENST00000540960 DBR1Q9UK59 544 aaKnown RBP9.25□□□□□ -0.93
CHD4-208ENST00000540960 WASF3Q9UPY6 502 aa9.25□□□□□ -0.93
CHD4-208ENST00000540960 ZKSCAN5Q9Y2L8 839 aa9.25□□□□□ -0.93
CHD4-208ENST00000540960 BIN1O00499 593 aa9.24□□□□□ -0.93
CHD4-208ENST00000540960 MEIS2O14770 477 aa9.24□□□□□ -0.93
CHD4-208ENST00000540960 CCP110O43303 1012 aa9.24□□□□□ -0.93
CHD4-208ENST00000540960 PPP1R11O60927 126 aaPredicted RBP9.24□□□□□ -0.93
CHD4-208ENST00000540960 RPN1P04843 607 aaKnown RBP9.24□□□□□ -0.93
CHD4-208ENST00000540960 TPM1P09493 284 aa9.24□□□□□ -0.93
CHD4-208ENST00000540960 GHRHRQ02643 423 aa9.24□□□□□ -0.93
CHD4-208ENST00000540960 ARHGAP1Q07960 439 aa9.24□□□□□ -0.93
CHD4-208ENST00000540960 COBLL1Q53SF7 1204 aa9.24□□□□□ -0.93
CHD4-208ENST00000540960 RARS2Q5T160 578 aaKnown RBP9.24□□□□□ -0.93
CHD4-208ENST00000540960 CCDC62Q6P9F0 684 aa9.24□□□□□ -0.93
CHD4-208ENST00000540960 PRR23CQ6ZRP0 262 aa9.24□□□□□ -0.93
CHD4-208ENST00000540960 C11orf57Q6ZUT1 292 aaPredicted RBP9.24□□□□□ -0.93
CHD4-208ENST00000540960 DHX37Q8IY37 1157 aaKnown RBP9.24□□□□□ -0.93
CHD4-208ENST00000540960 CCDC150Q8NCX0 1101 aa9.24□□□□□ -0.93
CHD4-208ENST00000540960 SCFD2Q8WU76 684 aa9.24□□□□□ -0.93
CHD4-208ENST00000540960 ZCCHC14Q8WYQ9 949 aaKnown RBP9.24□□□□□ -0.93
CHD4-208ENST00000540960 TTC12Q9H892 705 aaPredicted RBP9.24□□□□□ -0.93
CHD4-208ENST00000540960 SEMA4GQ9NTN9 838 aa9.24□□□□□ -0.93
CHD4-208ENST00000540960 EXOC1Q9NV70 894 aa9.24□□□□□ -0.93
CHD4-208ENST00000540960 HCSTQ9UBK5 93 aa9.24□□□□□ -0.93
CHD4-208ENST00000540960 RWDD2AQ9UIY3 292 aa9.24□□□□□ -0.93
CHD4-208ENST00000540960 GMEB2Q9UKD1 530 aa9.24□□□□□ -0.93
CHD4-208ENST00000540960 CCPG1Q9ULG6 757 aa9.24□□□□□ -0.93
CHD4-208ENST00000540960 PCDHGA2Q9Y5H1 932 aa9.24□□□□□ -0.93
CHD4-208ENST00000540960 MAFGO15525 162 aa9.23□□□□□ -0.93
CHD4-208ENST00000540960 STAM2O75886 525 aa9.23□□□□□ -0.93
CHD4-208ENST00000540960 RHOBTB3O94955 611 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms