RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 PHLDB3Q6NSJ2 640 aa13.35□□□□□ -0.27
AP003559.1-201ENST00000540906 EFCAB12Q6NXP0 572 aa13.35□□□□□ -0.27
AP003559.1-201ENST00000540906 IRF2BP2Q7Z5L9 587 aa13.35□□□□□ -0.27
AP003559.1-201ENST00000540906 LINC01465Q8N7H1 131 aa13.35□□□□□ -0.27
AP003559.1-201ENST00000540906 RNF149Q8NC42 400 aa13.35□□□□□ -0.27
AP003559.1-201ENST00000540906 LRRN4CLQ8ND94 238 aa13.35□□□□□ -0.27
AP003559.1-201ENST00000540906 PARD3BQ8TEW8 1205 aa13.35□□□□□ -0.27
AP003559.1-201ENST00000540906 SEMA4DQ92854 862 aa13.35□□□□□ -0.27
AP003559.1-201ENST00000540906 PPP1R16BQ96T49 567 aa13.35□□□□□ -0.27
AP003559.1-201ENST00000540906 MINDY3Q9H8M7 445 aa13.35□□□□□ -0.27
AP003559.1-201ENST00000540906 CREBZFQ9NS37 354 aa13.35□□□□□ -0.27
AP003559.1-201ENST00000540906 AIPL1Q9NZN9 384 aa13.35□□□□□ -0.27
AP003559.1-201ENST00000540906 SUCLA2Q9P2R7 463 aaPredicted RBP13.35□□□□□ -0.27
AP003559.1-201ENST00000540906 STYXL1Q9Y6J8 313 aa13.35□□□□□ -0.27
AP003559.1-201ENST00000540906 DUSP10Q9Y6W6 482 aa13.35□□□□□ -0.27
AP003559.1-201ENST00000540906 PTPRJQ12913 1337 aa13.34□□□□□ -0.27
AP003559.1-201ENST00000540906 PHLPP2Q6ZVD8 1323 aa13.34□□□□□ -0.27
AP003559.1-201ENST00000540906 UQCRHLA0A096LP55 91 aa13.34□□□□□ -0.27
AP003559.1-201ENST00000540906 MSCO60682 206 aa13.34□□□□□ -0.27
AP003559.1-201ENST00000540906 UQCRHP07919 91 aa13.34□□□□□ -0.27
AP003559.1-201ENST00000540906 HOXD8P13378 290 aaPredicted RBP13.34□□□□□ -0.27
AP003559.1-201ENST00000540906 ACOT2P49753 483 aa13.34□□□□□ -0.27
AP003559.1-201ENST00000540906 SLC26A2P50443 739 aa13.34□□□□□ -0.27
AP003559.1-201ENST00000540906 TNFAIP2Q03169 654 aa13.34□□□□□ -0.27
AP003559.1-201ENST00000540906 GFPT1Q06210 699 aaPredicted RBP13.34□□□□□ -0.27
AP003559.1-201ENST00000540906 DNAAF5Q86Y56 855 aa13.34□□□□□ -0.27
AP003559.1-201ENST00000540906 RHPN2Q8IUC4 686 aa13.34□□□□□ -0.27
AP003559.1-201ENST00000540906 CCDC170Q8IYT3 715 aa13.34□□□□□ -0.27
AP003559.1-201ENST00000540906 GPD1LQ8N335 351 aa13.34□□□□□ -0.27
AP003559.1-201ENST00000540906 EHBP1Q8NDI1 1231 aa13.34□□□□□ -0.27
AP003559.1-201ENST00000540906 MYRIPQ8NFW9 859 aa13.34□□□□□ -0.27
AP003559.1-201ENST00000540906 ZNF516Q92618 1163 aa13.34□□□□□ -0.27
AP003559.1-201ENST00000540906 KAT5Q92993 513 aa13.34□□□□□ -0.27
AP003559.1-201ENST00000540906 PRIMPOLQ96LW4 560 aa13.34□□□□□ -0.27
AP003559.1-201ENST00000540906 CCDC42Q96M95 316 aa13.34□□□□□ -0.27
AP003559.1-201ENST00000540906 TMEM134Q9H6X4 195 aa13.34□□□□□ -0.27
AP003559.1-201ENST00000540906 ZFYVE28Q9HCC9 887 aa13.34□□□□□ -0.27
AP003559.1-201ENST00000540906 GNEQ9Y223 722 aaKnown RBP13.34□□□□□ -0.27
AP003559.1-201ENST00000540906 GOLGA6L9A6NEM1 432 aa13.34□□□□□ -0.27
AP003559.1-201ENST00000540906 ABLIM1O14639 778 aa13.34□□□□□ -0.27
AP003559.1-201ENST00000540906 DYNC1LI2O43237 492 aaPredicted RBP13.34□□□□□ -0.27
AP003559.1-201ENST00000540906 AOC2O75106 756 aa13.34□□□□□ -0.27
AP003559.1-201ENST00000540906 IQCF3P0C7M6 154 aa13.34□□□□□ -0.27
AP003559.1-201ENST00000540906 KLRC1P26715 233 aa13.34□□□□□ -0.27
AP003559.1-201ENST00000540906 CYLC1P35663 651 aaPredicted RBP13.34□□□□□ -0.27
AP003559.1-201ENST00000540906 TM4SF4P48230 202 aa13.34□□□□□ -0.27
AP003559.1-201ENST00000540906 MAP2K1Q02750 393 aaPredicted RBP13.34□□□□□ -0.27
AP003559.1-201ENST00000540906 STRN3Q13033 797 aa13.34□□□□□ -0.27
AP003559.1-201ENST00000540906 ASIC2Q16515 512 aa13.34□□□□□ -0.27
AP003559.1-201ENST00000540906 DEFB115Q30KQ5 88 aa13.34□□□□□ -0.27
AP003559.1-201ENST00000540906 IQSEC1Q6DN90 963 aa13.34□□□□□ -0.27
AP003559.1-201ENST00000540906 ZNF571Q7Z3V5 609 aaPredicted RBP13.34□□□□□ -0.27
AP003559.1-201ENST00000540906 METTL13Q8N6R0 699 aa13.34□□□□□ -0.27
AP003559.1-201ENST00000540906 KIF18AQ8NI77 898 aa13.34□□□□□ -0.27
AP003559.1-201ENST00000540906 PSPC1Q8WXF1 523 aaKnown RBP13.34□□□□□ -0.27
AP003559.1-201ENST00000540906 SYN2Q92777 582 aaPredicted RBP13.34□□□□□ -0.27
AP003559.1-201ENST00000540906 NLRP4Q96MN2 994 aa13.34□□□□□ -0.27
AP003559.1-201ENST00000540906 ANKFY1Q9P2R3 1169 aa13.34□□□□□ -0.27
AP003559.1-201ENST00000540906 DNAJC12Q9UKB3 198 aa13.34□□□□□ -0.27
AP003559.1-201ENST00000540906 PPME1Q9Y570 386 aa13.34□□□□□ -0.27
AP003559.1-201ENST00000540906 H0YCG3 227 aa13.33□□□□□ -0.28
AP003559.1-201ENST00000540906 KIF2AO00139 706 aaPredicted RBP13.33□□□□□ -0.28
AP003559.1-201ENST00000540906 B4GALT5O43286 388 aa13.33□□□□□ -0.28
AP003559.1-201ENST00000540906 CSDE1O75534 798 aaKnown RBP13.33□□□□□ -0.28
AP003559.1-201ENST00000540906 LCA5LO95447 670 aa13.33□□□□□ -0.28
AP003559.1-201ENST00000540906 SERPING1P05155 500 aa13.33□□□□□ -0.28
AP003559.1-201ENST00000540906 HARSP12081 509 aaKnown RBP13.33□□□□□ -0.28
AP003559.1-201ENST00000540906 HIC1Q14526 733 aa13.33□□□□□ -0.28
AP003559.1-201ENST00000540906 TDRD12Q587J7 1177 aaKnown RBP13.33□□□□□ -0.28
AP003559.1-201ENST00000540906 ZNF484Q5JVG2 852 aa13.33□□□□□ -0.28
AP003559.1-201ENST00000540906 MARCH8Q5T0T0 291 aa13.33□□□□□ -0.28
AP003559.1-201ENST00000540906 CDR2LQ86X02 465 aaPredicted RBP13.33□□□□□ -0.28
AP003559.1-201ENST00000540906 SLC35F6Q8N357 371 aa13.33□□□□□ -0.28
AP003559.1-201ENST00000540906 TRPV1Q8NER1 839 aa13.33□□□□□ -0.28
AP003559.1-201ENST00000540906 CCDC102AQ96A19 550 aa13.33□□□□□ -0.28
AP003559.1-201ENST00000540906 HAUS4Q9H6D7 363 aa13.33□□□□□ -0.28
AP003559.1-201ENST00000540906 FBXL5Q9UKA1 691 aa13.33□□□□□ -0.28
AP003559.1-201ENST00000540906 AGO2Q9UKV8 859 aaKnown RBP13.33□□□□□ -0.28
AP003559.1-201ENST00000540906 GABRQQ9UN88 632 aa13.33□□□□□ -0.28
AP003559.1-201ENST00000540906 A0A087X0T9 212 aa13.32□□□□□ -0.28
AP003559.1-201ENST00000540906 A0A0B4J269 797 aa13.32□□□□□ -0.28
AP003559.1-201ENST00000540906 H3BRB1 525 aa13.32□□□□□ -0.28
AP003559.1-201ENST00000540906 EXTL3O43909 919 aa13.32□□□□□ -0.28
AP003559.1-201ENST00000540906 FAM189A1O60320 539 aa13.32□□□□□ -0.28
AP003559.1-201ENST00000540906 PPFIA4O75335 1185 aa13.32□□□□□ -0.28
AP003559.1-201ENST00000540906 GFPT2O94808 682 aa13.32□□□□□ -0.28
AP003559.1-201ENST00000540906 FAM228BP0C875 321 aa13.32□□□□□ -0.28
AP003559.1-201ENST00000540906 TNFSF9P41273 254 aa13.32□□□□□ -0.28
AP003559.1-201ENST00000540906 MXI1P50539 228 aa13.32□□□□□ -0.28
AP003559.1-201ENST00000540906 INHBEP58166 350 aa13.32□□□□□ -0.28
AP003559.1-201ENST00000540906 PTK2Q05397 1052 aa13.32□□□□□ -0.28
AP003559.1-201ENST00000540906 NAA30Q147X3 362 aaPredicted RBP13.32□□□□□ -0.28
AP003559.1-201ENST00000540906 DRAP1Q14919 205 aaPredicted RBP13.32□□□□□ -0.28
AP003559.1-201ENST00000540906 ZNF569Q5MCW4 686 aa13.32□□□□□ -0.28
AP003559.1-201ENST00000540906 MSL3Q8N5Y2 521 aaKnown RBP13.32□□□□□ -0.28
AP003559.1-201ENST00000540906 TAS1R2Q8TE23 839 aa13.32□□□□□ -0.28
AP003559.1-201ENST00000540906 TCP11Q8WWU5 503 aa13.32□□□□□ -0.28
AP003559.1-201ENST00000540906 KAT2BQ92831 832 aa13.32□□□□□ -0.28
AP003559.1-201ENST00000540906 JAKMIP2Q96AA8 810 aa13.32□□□□□ -0.28
AP003559.1-201ENST00000540906 SPAG5Q96R06 1193 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms