RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 C11orf16Q9NQ32 467 aa23.23■■□□□ 1.31
CHFR-217ENST00000540537 PRMT7Q9NVM4 692 aaPredicted RBP23.23■■□□□ 1.31
CHFR-217ENST00000540537 LRWD1Q9UFC0 647 aa23.23■■□□□ 1.31
CHFR-217ENST00000540537 IRAK3Q9Y616 596 aa23.23■■□□□ 1.31
CHFR-217ENST00000540537 B4GALT5O43286 388 aa23.22■■□□□ 1.31
CHFR-217ENST00000540537 DCXO43602 365 aa23.22■■□□□ 1.31
CHFR-217ENST00000540537 CD2BP2O95400 341 aaKnown RBP23.22■■□□□ 1.31
CHFR-217ENST00000540537 CXCL14O95715 111 aa23.22■■□□□ 1.31
CHFR-217ENST00000540537 CTSAP10619 480 aa23.22■■□□□ 1.31
CHFR-217ENST00000540537 HOXB8P17481 243 aaPredicted RBP23.22■■□□□ 1.31
CHFR-217ENST00000540537 LLGL2Q6P1M3 1020 aa23.22■■□□□ 1.31
CHFR-217ENST00000540537 SLC27A1Q6PCB7 646 aa23.22■■□□□ 1.31
CHFR-217ENST00000540537 ZBTB8OSQ8IWT0 167 aa23.22■■□□□ 1.31
CHFR-217ENST00000540537 HACE1Q8IYU2 909 aa23.22■■□□□ 1.31
CHFR-217ENST00000540537 IGSF22Q8N9C0 903 aa23.22■■□□□ 1.31
CHFR-217ENST00000540537 CASP10Q92851 521 aa23.22■■□□□ 1.31
CHFR-217ENST00000540537 TRIM6Q9C030 488 aaPredicted RBP23.22■■□□□ 1.31
CHFR-217ENST00000540537 C2orf40Q9H1Z8 148 aa23.22■■□□□ 1.31
CHFR-217ENST00000540537 GIT1Q9Y2X7 761 aa23.22■■□□□ 1.31
CHFR-217ENST00000540537 A0A1B0GUA9 196 aa23.21■■□□□ 1.31
CHFR-217ENST00000540537 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.21■■□□□ 1.31
CHFR-217ENST00000540537 CLASP2O75122 1294 aaKnown RBP23.21■■□□□ 1.31
CHFR-217ENST00000540537 POMCP01189 267 aa23.21■■□□□ 1.31
CHFR-217ENST00000540537 PRPHP41219 470 aa23.21■■□□□ 1.31
CHFR-217ENST00000540537 ECM1Q16610 540 aa23.21■■□□□ 1.31
CHFR-217ENST00000540537 FAM187BQ17R55 369 aa23.21■■□□□ 1.31
CHFR-217ENST00000540537 TBC1D32Q96NH3 1257 aa23.21■■□□□ 1.31
CHFR-217ENST00000540537 PHF7Q9BWX1 381 aaPredicted RBP23.21■■□□□ 1.31
CHFR-217ENST00000540537 S1PR5Q9H228 398 aa23.21■■□□□ 1.31
CHFR-217ENST00000540537 RNF39Q9H2S5 420 aa23.21■■□□□ 1.31
CHFR-217ENST00000540537 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.21■■□□□ 1.31
CHFR-217ENST00000540537 FAN1Q9Y2M0 1017 aa23.21■■□□□ 1.31
CHFR-217ENST00000540537 HES2Q9Y543 173 aa23.21■■□□□ 1.31
CHFR-217ENST00000540537 HCFC2Q9Y5Z7 792 aa23.21■■□□□ 1.31
CHFR-217ENST00000540537 ZMYM2Q9UBW7 1377 aa23.21■■□□□ 1.31
CHFR-217ENST00000540537 TDRD15B5MCY1 1934 aaKnown RBP23.2■■□□□ 1.3
CHFR-217ENST00000540537 ARL5CA6NH57 179 aa23.2■■□□□ 1.3
CHFR-217ENST00000540537 ALDH2P05091 517 aa23.2■■□□□ 1.3
CHFR-217ENST00000540537 GJB2P29033 226 aa23.2■■□□□ 1.3
CHFR-217ENST00000540537 CA8P35219 290 aa23.2■■□□□ 1.3
CHFR-217ENST00000540537 MLH1P40692 756 aa23.2■■□□□ 1.3
CHFR-217ENST00000540537 NAMPTP43490 491 aa23.2■■□□□ 1.3
CHFR-217ENST00000540537 RILPL1Q5EBL4 403 aa23.2■■□□□ 1.3
CHFR-217ENST00000540537 MCTP1Q6DN14 999 aa23.2■■□□□ 1.3
CHFR-217ENST00000540537 SYCE2Q6PIF2 218 aa23.2■■□□□ 1.3
CHFR-217ENST00000540537 BSNDQ8WZ55 320 aa23.2■■□□□ 1.3
CHFR-217ENST00000540537 GAD1Q99259 594 aa23.2■■□□□ 1.3
CHFR-217ENST00000540537 VN1R3Q9BXE9 311 aa23.2■■□□□ 1.3
CHFR-217ENST00000540537 FZD8Q9H461 694 aa23.2■■□□□ 1.3
CHFR-217ENST00000540537 NXF3Q9H4D5 531 aaKnown RBP23.2■■□□□ 1.3
CHFR-217ENST00000540537 KIAA1024Q9UPX6 916 aa23.2■■□□□ 1.3
CHFR-217ENST00000540537 FAM86C2PA6NEL3 165 aa23.19■■□□□ 1.3
CHFR-217ENST00000540537 LOC730098B7Z3J9 87 aa23.19■■□□□ 1.3
CHFR-217ENST00000540537 NPTXRO95502 500 aa23.19■■□□□ 1.3
CHFR-217ENST00000540537 PPP2R5AQ15172 486 aa23.19■■□□□ 1.3
CHFR-217ENST00000540537 TPRNQ4KMQ1 711 aa23.19■■□□□ 1.3
CHFR-217ENST00000540537 COLGALT2Q8IYK4 626 aa23.19■■□□□ 1.3
CHFR-217ENST00000540537 SNX29Q8TEQ0 813 aa23.19■■□□□ 1.3
CHFR-217ENST00000540537 AUTS2Q8WXX7 1259 aa23.19■■□□□ 1.3
CHFR-217ENST00000540537 BHMT2Q9H2M3 363 aa23.19■■□□□ 1.3
CHFR-217ENST00000540537 DDX19AQ9NUU7 478 aaKnown RBP23.19■■□□□ 1.3
CHFR-217ENST00000540537 NRP1O14786 923 aa23.18■■□□□ 1.3
CHFR-217ENST00000540537 SCNN1GP51170 649 aa23.18■■□□□ 1.3
CHFR-217ENST00000540537 DSC1Q08554 894 aa23.18■■□□□ 1.3
CHFR-217ENST00000540537 CBX2Q14781 532 aaPredicted RBP23.18■■□□□ 1.3
CHFR-217ENST00000540537 TMEM87AQ8NBN3 555 aa23.18■■□□□ 1.3
CHFR-217ENST00000540537 DEPTORQ8TB45 409 aa23.18■■□□□ 1.3
CHFR-217ENST00000540537 ZFP42Q96MM3 310 aa23.18■■□□□ 1.3
CHFR-217ENST00000540537 APOL6Q9BWW8 343 aa23.18■■□□□ 1.3
CHFR-217ENST00000540537 H3BQV1 296 aa23.17■■□□□ 1.3
CHFR-217ENST00000540537 N4BP3O15049 544 aa23.17■■□□□ 1.3
CHFR-217ENST00000540537 PTPN14Q15678 1187 aa23.17■■□□□ 1.3
CHFR-217ENST00000540537 MAPK6Q16659 721 aa23.17■■□□□ 1.3
CHFR-217ENST00000540537 HERC4Q5GLZ8 1057 aaPredicted RBP23.17■■□□□ 1.3
CHFR-217ENST00000540537 KRT79Q5XKE5 535 aa23.17■■□□□ 1.3
CHFR-217ENST00000540537 DTHD1Q6ZMT9 781 aa23.17■■□□□ 1.3
CHFR-217ENST00000540537 CDR2LQ86X02 465 aaPredicted RBP23.17■■□□□ 1.3
CHFR-217ENST00000540537 RNF135Q8IUD6 432 aa23.17■■□□□ 1.3
CHFR-217ENST00000540537 KIFAP3Q92845 792 aa23.17■■□□□ 1.3
CHFR-217ENST00000540537 IFT74Q96LB3 600 aa23.17■■□□□ 1.3
CHFR-217ENST00000540537 CCDC113Q9H0I3 377 aa23.17■■□□□ 1.3
CHFR-217ENST00000540537 MIOSQ9NXC5 875 aa23.17■■□□□ 1.3
CHFR-217ENST00000540537 PRR33A8MZF0 331 aa23.16■■□□□ 1.3
CHFR-217ENST00000540537 ACKR2O00590 384 aa23.16■■□□□ 1.3
CHFR-217ENST00000540537 PRKCBP05771 671 aa23.16■■□□□ 1.3
CHFR-217ENST00000540537 OR1G1P47890 313 aa23.16■■□□□ 1.3
CHFR-217ENST00000540537 ATP2C1P98194 919 aaPredicted RBP23.16■■□□□ 1.3
CHFR-217ENST00000540537 ITIH3Q06033 890 aa23.16■■□□□ 1.3
CHFR-217ENST00000540537 PRPF4BQ13523 1007 aaKnown RBP23.16■■□□□ 1.3
CHFR-217ENST00000540537 IL17AQ16552 155 aa23.16■■□□□ 1.3
CHFR-217ENST00000540537 PDZD7Q9H5P4 517 aa23.16■■□□□ 1.3
CHFR-217ENST00000540537 DZANK1Q9NVP4 752 aa23.16■■□□□ 1.3
CHFR-217ENST00000540537 MARCH5Q9NX47 278 aa23.16■■□□□ 1.3
CHFR-217ENST00000540537 DAXXQ9UER7 740 aaPredicted RBP23.16■■□□□ 1.3
CHFR-217ENST00000540537 RAPGEFL1Q9UHV5 662 aa23.16■■□□□ 1.3
CHFR-217ENST00000540537 SMC3Q9UQE7 1217 aa23.16■■□□□ 1.3
CHFR-217ENST00000540537 PRG3Q9Y2Y8 225 aaPredicted RBP23.16■■□□□ 1.3
CHFR-217ENST00000540537 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.16■■□□□ 1.3
CHFR-217ENST00000540537 NR1I2O75469 434 aa23.15■■□□□ 1.3
CHFR-217ENST00000540537 SOD2P04179 222 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms