RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 FIGNQ5HY92 759 aa10.16□□□□□ -0.78
CTNNA1-243ENST00000540387 RNF43Q68DV7 783 aa10.16□□□□□ -0.78
CTNNA1-243ENST00000540387 SAPCD2Q86UD0 394 aa10.16□□□□□ -0.78
CTNNA1-243ENST00000540387 MICU3Q86XE3 530 aa10.16□□□□□ -0.78
CTNNA1-243ENST00000540387 ECHDC2Q86YB7 292 aa10.16□□□□□ -0.78
CTNNA1-243ENST00000540387 MAP7D3Q8IWC1 876 aa10.16□□□□□ -0.78
CTNNA1-243ENST00000540387 CYP4X1Q8N118 509 aa10.16□□□□□ -0.78
CTNNA1-243ENST00000540387 OGFOD1Q8N543 542 aa10.16□□□□□ -0.78
CTNNA1-243ENST00000540387 CTNNBL1Q8WYA6 563 aaPredicted RBP10.16□□□□□ -0.78
CTNNA1-243ENST00000540387 MPP4Q96JB8 637 aa10.16□□□□□ -0.78
CTNNA1-243ENST00000540387 SLC26A6Q9BXS9 759 aa10.16□□□□□ -0.78
CTNNA1-243ENST00000540387 DDX47Q9H0S4 455 aaKnown RBP10.16□□□□□ -0.78
CTNNA1-243ENST00000540387 TRPV5Q9NQA5 729 aa10.16□□□□□ -0.78
CTNNA1-243ENST00000540387 KLHL14Q9P2G3 628 aa10.16□□□□□ -0.78
CTNNA1-243ENST00000540387 HAO1Q9UJM8 370 aa10.16□□□□□ -0.78
CTNNA1-243ENST00000540387 ZNF180Q9UJW8 692 aa10.16□□□□□ -0.78
CTNNA1-243ENST00000540387 R3HDM2Q9Y2K5 976 aaKnown RBP10.16□□□□□ -0.78
CTNNA1-243ENST00000540387 ATP5HO75947 161 aa10.15□□□□□ -0.78
CTNNA1-243ENST00000540387 AGTP01019 485 aa10.15□□□□□ -0.78
CTNNA1-243ENST00000540387 NUDT17P0C025 328 aa10.15□□□□□ -0.78
CTNNA1-243ENST00000540387 PLCG2P16885 1265 aa10.15□□□□□ -0.78
CTNNA1-243ENST00000540387 TARSP26639 723 aaKnown RBP10.15□□□□□ -0.78
CTNNA1-243ENST00000540387 SERPINB3P29508 390 aa10.15□□□□□ -0.78
CTNNA1-243ENST00000540387 CDK7P50613 346 aa10.15□□□□□ -0.78
CTNNA1-243ENST00000540387 CACNB3P54284 484 aa10.15□□□□□ -0.78
CTNNA1-243ENST00000540387 CACNB1Q02641 598 aaPredicted RBP10.15□□□□□ -0.78
CTNNA1-243ENST00000540387 GFPT1Q06210 699 aaPredicted RBP10.15□□□□□ -0.78
CTNNA1-243ENST00000540387 PICALMQ13492 652 aa10.15□□□□□ -0.78
CTNNA1-243ENST00000540387 CERKLQ49MI3 558 aaPredicted RBP10.15□□□□□ -0.78
CTNNA1-243ENST00000540387 KHDC1Q4VXA5 237 aaKnown RBP10.15□□□□□ -0.78
CTNNA1-243ENST00000540387 TMEM53Q6P2H8 277 aa10.15□□□□□ -0.78
CTNNA1-243ENST00000540387 RIBC1Q8N443 379 aaPredicted RBP10.15□□□□□ -0.78
CTNNA1-243ENST00000540387 AGBL3Q8NEM8 1001 aa10.15□□□□□ -0.78
CTNNA1-243ENST00000540387 MGARPQ8TDB4 240 aa10.15□□□□□ -0.78
CTNNA1-243ENST00000540387 TUBGCP5Q96RT8 1024 aa10.15□□□□□ -0.78
CTNNA1-243ENST00000540387 SIKE1Q9BRV8 207 aa10.15□□□□□ -0.78
CTNNA1-243ENST00000540387 AP1M1Q9BXS5 423 aa10.15□□□□□ -0.78
CTNNA1-243ENST00000540387 MYLK2Q9H1R3 596 aa10.15□□□□□ -0.78
CTNNA1-243ENST00000540387 METTL5Q9NRN9 209 aaKnown RBP10.15□□□□□ -0.78
CTNNA1-243ENST00000540387 SUCLA2Q9P2R7 463 aaPredicted RBP10.15□□□□□ -0.78
CTNNA1-243ENST00000540387 TBC1D30Q9Y2I9 924 aa10.15□□□□□ -0.78
CTNNA1-243ENST00000540387 TMED5Q9Y3A6 229 aa10.15□□□□□ -0.78
CTNNA1-243ENST00000540387 CCDC88AQ3V6T2 1871 aa10.15□□□□□ -0.78
CTNNA1-243ENST00000540387 MAGEB3O15480 346 aa10.15□□□□□ -0.78
CTNNA1-243ENST00000540387 HDAC4P56524 1084 aa10.15□□□□□ -0.78
CTNNA1-243ENST00000540387 NFIAQ12857 509 aa10.15□□□□□ -0.78
CTNNA1-243ENST00000540387 GIT2Q14161 759 aa10.15□□□□□ -0.78
CTNNA1-243ENST00000540387 MYBPC2Q14324 1141 aa10.15□□□□□ -0.78
CTNNA1-243ENST00000540387 RCN1Q15293 331 aa10.15□□□□□ -0.78
CTNNA1-243ENST00000540387 SPDYCQ5MJ68 293 aa10.15□□□□□ -0.78
CTNNA1-243ENST00000540387 SYDE2Q5VT97 1194 aa10.15□□□□□ -0.78
CTNNA1-243ENST00000540387 APOA5Q6Q788 366 aa10.15□□□□□ -0.78
CTNNA1-243ENST00000540387 LRRC74BQ6ZQY2 392 aa10.15□□□□□ -0.78
CTNNA1-243ENST00000540387 MARK2Q7KZI7 788 aaKnown RBP10.15□□□□□ -0.78
CTNNA1-243ENST00000540387 NANOGNBQ7Z5D8 188 aa10.15□□□□□ -0.78
CTNNA1-243ENST00000540387 VSIG1Q86XK7 387 aa10.15□□□□□ -0.78
CTNNA1-243ENST00000540387 INPP5DQ92835 1189 aa10.15□□□□□ -0.78
CTNNA1-243ENST00000540387 DNAJC1Q96KC8 554 aaKnown RBP10.15□□□□□ -0.78
CTNNA1-243ENST00000540387 TRIM47Q96LD4 638 aa10.15□□□□□ -0.78
CTNNA1-243ENST00000540387 OLFM3Q96PB7 478 aa10.15□□□□□ -0.78
CTNNA1-243ENST00000540387 CCDC113Q9H0I3 377 aa10.15□□□□□ -0.78
CTNNA1-243ENST00000540387 FOXP1Q9H334 677 aaPredicted RBP10.15□□□□□ -0.78
CTNNA1-243ENST00000540387 TDRD3Q9H7E2 651 aaKnown RBP10.15□□□□□ -0.78
CTNNA1-243ENST00000540387 DDX4Q9NQI0 724 aaKnown RBP10.15□□□□□ -0.78
CTNNA1-243ENST00000540387 PFDN4Q9NQP4 134 aa10.15□□□□□ -0.78
CTNNA1-243ENST00000540387 DDX25Q9UHL0 483 aaKnown RBP10.15□□□□□ -0.78
CTNNA1-243ENST00000540387 SAP30BPQ9UHR5 308 aaKnown RBP10.15□□□□□ -0.78
CTNNA1-243ENST00000540387 ANGEL1Q9UNK9 670 aaKnown RBP10.15□□□□□ -0.78
CTNNA1-243ENST00000540387 ZNF541Q9H0D2 1346 aa10.15□□□□□ -0.79
CTNNA1-243ENST00000540387 HTR3EA5X5Y0 456 aa10.14□□□□□ -0.79
CTNNA1-243ENST00000540387 BOLA2-SMG1P6H3BVE0 249 aa10.14□□□□□ -0.79
CTNNA1-243ENST00000540387 LSM1O15116 133 aaKnown RBP10.14□□□□□ -0.79
CTNNA1-243ENST00000540387 GTPBP6O43824 516 aaPredicted RBP10.14□□□□□ -0.79
CTNNA1-243ENST00000540387 POTEJP0CG39 1038 aa10.14□□□□□ -0.79
CTNNA1-243ENST00000540387 PYGMP11217 842 aa10.14□□□□□ -0.79
CTNNA1-243ENST00000540387 GUCY1A2P33402 732 aa10.14□□□□□ -0.79
CTNNA1-243ENST00000540387 CA8P35219 290 aa10.14□□□□□ -0.79
CTNNA1-243ENST00000540387 MAP7D1Q3KQU3 841 aa10.14□□□□□ -0.79
CTNNA1-243ENST00000540387 WDR72Q3MJ13 1102 aa10.14□□□□□ -0.79
CTNNA1-243ENST00000540387 CGB2Q6NT52 195 aa10.14□□□□□ -0.79
CTNNA1-243ENST00000540387 EXOC8Q8IYI6 725 aa10.14□□□□□ -0.79
CTNNA1-243ENST00000540387 ADSSL1Q8N142 457 aa10.14□□□□□ -0.79
CTNNA1-243ENST00000540387 CFAP61Q8NHU2 1237 aa10.14□□□□□ -0.79
CTNNA1-243ENST00000540387 EEF2KMTQ96G04 330 aa10.14□□□□□ -0.79
CTNNA1-243ENST00000540387 DYDC2Q96IM9 177 aa10.14□□□□□ -0.79
CTNNA1-243ENST00000540387 SMC6Q96SB8 1091 aa10.14□□□□□ -0.79
CTNNA1-243ENST00000540387 FMO2Q99518 471 aa10.14□□□□□ -0.79
CTNNA1-243ENST00000540387 ASCC2Q9H1I8 757 aaPredicted RBP10.14□□□□□ -0.79
CTNNA1-243ENST00000540387 LUC7LQ9NQ29 371 aaKnown RBP10.14□□□□□ -0.79
CTNNA1-243ENST00000540387 SEC63Q9UGP8 760 aaKnown RBP10.14□□□□□ -0.79
CTNNA1-243ENST00000540387 AMACRQ9UHK6 382 aa10.14□□□□□ -0.79
CTNNA1-243ENST00000540387 HDAC9Q9UKV0 1011 aa10.14□□□□□ -0.79
CTNNA1-243ENST00000540387 FLT1P17948 1338 aa10.14□□□□□ -0.79
CTNNA1-243ENST00000540387 WDR19Q8NEZ3 1342 aa10.14□□□□□ -0.79
CTNNA1-243ENST00000540387 ARFGEF1Q9Y6D6 1849 aa10.14□□□□□ -0.79
CTNNA1-243ENST00000540387 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.14□□□□□ -0.79
CTNNA1-243ENST00000540387 KCNK3O14649 394 aa10.14□□□□□ -0.79
CTNNA1-243ENST00000540387 RPN1P04843 607 aaKnown RBP10.14□□□□□ -0.79
CTNNA1-243ENST00000540387 MTTPP55157 894 aa10.14□□□□□ -0.79
CTNNA1-243ENST00000540387 C1QBPQ07021 282 aaKnown RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms