RNA–Protein interactions for RNA: ENST00000540122.5

PUDP-206, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 2 BASIC

Gene PUDP, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-206ENST00000540122 MAMSTRQ6ZN01 415 aa17.44■□□□□ 0.38
PUDP-206ENST00000540122 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.44■□□□□ 0.38
PUDP-206ENST00000540122 GLYCTKQ8IVS8 523 aa17.44■□□□□ 0.38
PUDP-206ENST00000540122 KDF1Q8NAX2 398 aaPredicted RBP17.44■□□□□ 0.38
PUDP-206ENST00000540122 NCOA7Q8NI08 942 aa17.44■□□□□ 0.38
PUDP-206ENST00000540122 MAP4K1Q92918 833 aa17.44■□□□□ 0.38
PUDP-206ENST00000540122 B3GALT6Q96L58 329 aa17.44■□□□□ 0.38
PUDP-206ENST00000540122 CHRDQ9H2X0 955 aa17.44■□□□□ 0.38
PUDP-206ENST00000540122 RSAD1Q9HA92 442 aa17.44■□□□□ 0.38
PUDP-206ENST00000540122 IGLV3-22A0A075B6J6 115 aa17.43■□□□□ 0.38
PUDP-206ENST00000540122 A0A087WZ62 844 aa17.43■□□□□ 0.38
PUDP-206ENST00000540122 ZNF862O60290 1169 aa17.43■□□□□ 0.38
PUDP-206ENST00000540122 OR1G1P47890 313 aa17.43■□□□□ 0.38
PUDP-206ENST00000540122 TYW1BQ6NUM6 668 aa17.43■□□□□ 0.38
PUDP-206ENST00000540122 ZNF687Q8N1G0 1237 aa17.43■□□□□ 0.38
PUDP-206ENST00000540122 ITFG1Q8TB96 612 aa17.43■□□□□ 0.38
PUDP-206ENST00000540122 FDXACB1Q9BRP7 624 aaPredicted RBP17.43■□□□□ 0.38
PUDP-206ENST00000540122 ZNF577Q9BSK1 485 aa17.43■□□□□ 0.38
PUDP-206ENST00000540122 LNPKQ9C0E8 428 aa17.43■□□□□ 0.38
PUDP-206ENST00000540122 RIC8AQ9NPQ8 531 aa17.43■□□□□ 0.38
PUDP-206ENST00000540122 HEBP1Q9NRV9 189 aa17.43■□□□□ 0.38
PUDP-206ENST00000540122 CHST7Q9NS84 486 aa17.43■□□□□ 0.38
PUDP-206ENST00000540122 TCEAL9Q9UHQ7 104 aa17.43■□□□□ 0.38
PUDP-206ENST00000540122 U3KPZ7 1027 aaPredicted RBP17.43■□□□□ 0.38
PUDP-206ENST00000540122 E7EWF7 191 aa17.42■□□□□ 0.38
PUDP-206ENST00000540122 F8W810 466 aa17.42■□□□□ 0.38
PUDP-206ENST00000540122 HRO43593 1189 aa17.42■□□□□ 0.38
PUDP-206ENST00000540122 RXRAP19793 462 aa17.42■□□□□ 0.38
PUDP-206ENST00000540122 PRKCEQ02156 737 aa17.42■□□□□ 0.38
PUDP-206ENST00000540122 AASDHQ4L235 1098 aaPredicted RBP17.42■□□□□ 0.38
PUDP-206ENST00000540122 WWC2Q6AWC2 1192 aa17.42■□□□□ 0.38
PUDP-206ENST00000540122 MRPL10Q7Z7H8 261 aaKnown RBP17.42■□□□□ 0.38
PUDP-206ENST00000540122 COLGALT2Q8IYK4 626 aa17.42■□□□□ 0.38
PUDP-206ENST00000540122 CCDC82Q8N4S0 544 aa17.42■□□□□ 0.38
PUDP-206ENST00000540122 MBOAT7Q96N66 472 aa17.42■□□□□ 0.38
PUDP-206ENST00000540122 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.42■□□□□ 0.38
PUDP-206ENST00000540122 NRBP2Q9NSY0 501 aa17.42■□□□□ 0.38
PUDP-206ENST00000540122 TBC1D22BQ9NU19 505 aa17.42■□□□□ 0.38
PUDP-206ENST00000540122 FNIP2Q9P278 1114 aa17.42■□□□□ 0.38
PUDP-206ENST00000540122 NDRG2Q9UN36 371 aaKnown RBP17.42■□□□□ 0.38
PUDP-206ENST00000540122 CNTNAP2Q9UHC6 1331 aa17.42■□□□□ 0.38
PUDP-206ENST00000540122 RPL17P18621 184 aaKnown RBP17.41■□□□□ 0.38
PUDP-206ENST00000540122 CCR3P51677 355 aa17.41■□□□□ 0.38
PUDP-206ENST00000540122 CDC42EP1Q00587 391 aa17.41■□□□□ 0.38
PUDP-206ENST00000540122 SRSF5Q13243 272 aaKnown RBP17.41■□□□□ 0.38
PUDP-206ENST00000540122 CATSPER4Q7RTX7 472 aa17.41■□□□□ 0.38
PUDP-206ENST00000540122 TEX2Q8IWB9 1127 aa17.41■□□□□ 0.38
PUDP-206ENST00000540122 IER2Q9BTL4 223 aa17.41■□□□□ 0.38
PUDP-206ENST00000540122 INO80BQ9C086 356 aaPredicted RBP17.41■□□□□ 0.38
PUDP-206ENST00000540122 SAMM50Q9Y512 469 aa17.41■□□□□ 0.38
PUDP-206ENST00000540122 MYH9P35579 1960 aaKnown RBP17.4■□□□□ 0.38
PUDP-206ENST00000540122 ADCY7P51828 1080 aa17.4■□□□□ 0.38
PUDP-206ENST00000540122 NAPAP54920 295 aa17.4■□□□□ 0.38
PUDP-206ENST00000540122 AP3B2Q13367 1082 aa17.4■□□□□ 0.38
PUDP-206ENST00000540122 ZNF410Q86VK4 478 aa17.4■□□□□ 0.38
PUDP-206ENST00000540122 NPAS3Q8IXF0 933 aa17.4■□□□□ 0.38
PUDP-206ENST00000540122 MB21D2Q8IYB1 491 aaPredicted RBP17.4■□□□□ 0.38
PUDP-206ENST00000540122 AGPAT5Q9NUQ2 364 aa17.4■□□□□ 0.38
PUDP-206ENST00000540122 FBXW11Q9UKB1 542 aa17.4■□□□□ 0.38
PUDP-206ENST00000540122 MTCL1Q9Y4B5 1905 aaKnown RBP17.4■□□□□ 0.38
PUDP-206ENST00000540122 CHURC1-FNTBB4DL54 471 aa17.39■□□□□ 0.37
PUDP-206ENST00000540122 ECI2O75521 394 aa17.39■□□□□ 0.37
PUDP-206ENST00000540122 KCNK5O95279 499 aa17.39■□□□□ 0.37
PUDP-206ENST00000540122 HNRNPA1P09651 372 aaKnown RBP eCLIP17.39■□□□□ 0.37
PUDP-206ENST00000540122 FNTBP49356 437 aa17.39■□□□□ 0.37
PUDP-206ENST00000540122 SATB1Q01826 763 aa17.39■□□□□ 0.37
PUDP-206ENST00000540122 DSC1Q08554 894 aa17.39■□□□□ 0.37
PUDP-206ENST00000540122 SF3A2Q15428 464 aaKnown RBP17.39■□□□□ 0.37
PUDP-206ENST00000540122 TARBP2Q15633 366 aaKnown RBP17.39■□□□□ 0.37
PUDP-206ENST00000540122 UGCGQ16739 394 aa17.39■□□□□ 0.37
PUDP-206ENST00000540122 LRSAM1Q6UWE0 723 aa17.39■□□□□ 0.37
PUDP-206ENST00000540122 TMTC3Q6ZXV5 915 aa17.39■□□□□ 0.37
PUDP-206ENST00000540122 GPR65Q8IYL9 337 aa17.39■□□□□ 0.37
PUDP-206ENST00000540122 FAM160A2Q8N612 972 aaPredicted RBP17.39■□□□□ 0.37
PUDP-206ENST00000540122 GPR62Q9BZJ7 368 aa17.39■□□□□ 0.37
PUDP-206ENST00000540122 PLA2G2FQ9BZM2 168 aa17.39■□□□□ 0.37
PUDP-206ENST00000540122 RXFP3Q9NSD7 469 aa17.39■□□□□ 0.37
PUDP-206ENST00000540122 DOCK6Q96HP0 2047 aa17.38■□□□□ 0.37
PUDP-206ENST00000540122 WDR64B1ANS9 1081 aa17.38■□□□□ 0.37
PUDP-206ENST00000540122 CCL16O15467 120 aa17.38■□□□□ 0.37
PUDP-206ENST00000540122 CLK2P49760 499 aaKnown RBP17.38■□□□□ 0.37
PUDP-206ENST00000540122 CREMQ03060 361 aa17.38■□□□□ 0.37
PUDP-206ENST00000540122 USP41Q3LFD5 358 aa17.38■□□□□ 0.37
PUDP-206ENST00000540122 PPM1LQ5SGD2 360 aa17.38■□□□□ 0.37
PUDP-206ENST00000540122 UBXN11Q5T124 520 aa17.38■□□□□ 0.37
PUDP-206ENST00000540122 LIN9Q5TKA1 542 aa17.38■□□□□ 0.37
PUDP-206ENST00000540122 PPP1R18Q6NYC8 613 aa17.38■□□□□ 0.37
PUDP-206ENST00000540122 NFXL1Q6ZNB6 911 aa17.38■□□□□ 0.37
PUDP-206ENST00000540122 RAB11FIP4Q86YS3 637 aa17.38■□□□□ 0.37
PUDP-206ENST00000540122 RHPN2Q8IUC4 686 aa17.38■□□□□ 0.37
PUDP-206ENST00000540122 PLEKHM2Q8IWE5 1019 aa17.38■□□□□ 0.37
PUDP-206ENST00000540122 C12orf50Q8NA57 414 aaPredicted RBP17.38■□□□□ 0.37
PUDP-206ENST00000540122 TMEM121BQ9BXQ6 578 aaPredicted RBP17.38■□□□□ 0.37
PUDP-206ENST00000540122 POLIQ9UNA4 740 aa17.38■□□□□ 0.37
PUDP-206ENST00000540122 WDFY3Q8IZQ1 3526 aa17.37■□□□□ 0.37
PUDP-206ENST00000540122 IGKV6-21A0A0C4DH24 114 aa17.37■□□□□ 0.37
PUDP-206ENST00000540122 SRRM3A6NNA2 597 aaPredicted RBP17.37■□□□□ 0.37
PUDP-206ENST00000540122 MAN2B1O00754 1011 aa17.37■□□□□ 0.37
PUDP-206ENST00000540122 C8AP07357 584 aa17.37■□□□□ 0.37
PUDP-206ENST00000540122 NCLP19338 710 aaKnown RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms