RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 GADD45BO75293 160 aaPredicted RBP7.68□□□□□ -1.18
LPCAT3-209ENST00000540060 ATF7P17544 494 aaPredicted RBP7.68□□□□□ -1.18
LPCAT3-209ENST00000540060 GAP43P17677 238 aa7.68□□□□□ -1.18
LPCAT3-209ENST00000540060 DNAJB2P25686 324 aa7.68□□□□□ -1.18
LPCAT3-209ENST00000540060 CASP1P29466 404 aa7.68□□□□□ -1.18
LPCAT3-209ENST00000540060 PBX2P40425 430 aa7.68□□□□□ -1.18
LPCAT3-209ENST00000540060 RAB27AP51159 221 aa7.68□□□□□ -1.18
LPCAT3-209ENST00000540060 NUBP1P53384 320 aa7.68□□□□□ -1.18
LPCAT3-209ENST00000540060 RABGGTBP53611 331 aa7.68□□□□□ -1.18
LPCAT3-209ENST00000540060 SMTNP53814 917 aa7.68□□□□□ -1.18
LPCAT3-209ENST00000540060 FAM189BP81408 668 aa7.68□□□□□ -1.18
LPCAT3-209ENST00000540060 HTRA4P83105 476 aaPredicted RBP7.68□□□□□ -1.18
LPCAT3-209ENST00000540060 AMPD3Q01432 767 aa7.68□□□□□ -1.18
LPCAT3-209ENST00000540060 FAM160A1Q05DH4 1040 aa7.68□□□□□ -1.18
LPCAT3-209ENST00000540060 EHHADHQ08426 723 aa7.68□□□□□ -1.18
LPCAT3-209ENST00000540060 COASYQ13057 564 aa7.68□□□□□ -1.18
LPCAT3-209ENST00000540060 PRPF4BQ13523 1007 aaKnown RBP7.68□□□□□ -1.18
LPCAT3-209ENST00000540060 SNW1Q13573 536 aaKnown RBP7.68□□□□□ -1.18
LPCAT3-209ENST00000540060 RAB30Q15771 203 aa7.68□□□□□ -1.18
LPCAT3-209ENST00000540060 UBXN11Q5T124 520 aa7.68□□□□□ -1.18
LPCAT3-209ENST00000540060 TWF2Q6IBS0 349 aaKnown RBP7.68□□□□□ -1.18
LPCAT3-209ENST00000540060 FAM117BQ6P1L5 589 aa7.68□□□□□ -1.18
LPCAT3-209ENST00000540060 NOTUMQ6P988 496 aa7.68□□□□□ -1.18
LPCAT3-209ENST00000540060 KRBA2Q6ZNG9 492 aa7.68□□□□□ -1.18
LPCAT3-209ENST00000540060 HAUS6Q7Z4H7 955 aa7.68□□□□□ -1.18
LPCAT3-209ENST00000540060 ZNF598Q86UK7 904 aaKnown RBP7.68□□□□□ -1.18
LPCAT3-209ENST00000540060 NPAS4Q8IUM7 802 aa7.68□□□□□ -1.18
LPCAT3-209ENST00000540060 GRAMD1CQ8IYS0 662 aa7.68□□□□□ -1.18
LPCAT3-209ENST00000540060 HS6ST3Q8IZP7 471 aa7.68□□□□□ -1.18
LPCAT3-209ENST00000540060 MYCT1Q8N699 235 aa7.68□□□□□ -1.18
LPCAT3-209ENST00000540060 ENGASEQ8NFI3 743 aa7.68□□□□□ -1.18
LPCAT3-209ENST00000540060 ZNF689Q96CS4 500 aaPredicted RBP7.68□□□□□ -1.18
LPCAT3-209ENST00000540060 CCDC51Q96ER9 411 aa7.68□□□□□ -1.18
LPCAT3-209ENST00000540060 LRCH3Q96II8 777 aa7.68□□□□□ -1.18
LPCAT3-209ENST00000540060 CPB2Q96IY4 423 aa7.68□□□□□ -1.18
LPCAT3-209ENST00000540060 C7orf25Q9BPX7 421 aa7.68□□□□□ -1.18
LPCAT3-209ENST00000540060 LRRC27Q9C0I9 530 aa7.68□□□□□ -1.18
LPCAT3-209ENST00000540060 ST6GALNAC4Q9H4F1 302 aa7.68□□□□□ -1.18
LPCAT3-209ENST00000540060 PDZD7Q9H5P4 517 aa7.68□□□□□ -1.18
LPCAT3-209ENST00000540060 TMEM134Q9H6X4 195 aa7.68□□□□□ -1.18
LPCAT3-209ENST00000540060 ELAC1Q9H777 363 aaKnown RBP7.68□□□□□ -1.18
LPCAT3-209ENST00000540060 FAM105AQ9NUU6 356 aa7.68□□□□□ -1.18
LPCAT3-209ENST00000540060 PANK4Q9NVE7 773 aa7.68□□□□□ -1.18
LPCAT3-209ENST00000540060 TMEM161AQ9NX61 479 aa7.68□□□□□ -1.18
LPCAT3-209ENST00000540060 SEL1LQ9UBV2 794 aa7.68□□□□□ -1.18
LPCAT3-209ENST00000540060 KCNG1Q9UIX4 513 aa7.68□□□□□ -1.18
LPCAT3-209ENST00000540060 YBX2Q9Y2T7 364 aaKnown RBP7.68□□□□□ -1.18
LPCAT3-209ENST00000540060 PCDHA11Q9Y5I1 949 aa7.68□□□□□ -1.18
LPCAT3-209ENST00000540060 PRUNE2Q8WUY3 3088 aa7.68□□□□□ -1.18
LPCAT3-209ENST00000540060 A0A1B0GUA9 196 aa7.67□□□□□ -1.18
LPCAT3-209ENST00000540060 LCHNA4D1U4 455 aa7.67□□□□□ -1.18
LPCAT3-209ENST00000540060 H0YCG3 227 aa7.67□□□□□ -1.18
LPCAT3-209ENST00000540060 K7ERI5 159 aa7.67□□□□□ -1.18
LPCAT3-209ENST00000540060 ABLIM1O14639 778 aa7.67□□□□□ -1.18
LPCAT3-209ENST00000540060 N4BP3O15049 544 aa7.67□□□□□ -1.18
LPCAT3-209ENST00000540060 TLL1O43897 1013 aa7.67□□□□□ -1.18
LPCAT3-209ENST00000540060 ZNF623O75123 536 aa7.67□□□□□ -1.18
LPCAT3-209ENST00000540060 PPP1R37O75864 691 aa7.67□□□□□ -1.18
LPCAT3-209ENST00000540060 DGKIO75912 1065 aa7.67□□□□□ -1.18
LPCAT3-209ENST00000540060 UPP2O95045 317 aa7.67□□□□□ -1.18
LPCAT3-209ENST00000540060 ZNF202O95125 648 aa7.67□□□□□ -1.18
LPCAT3-209ENST00000540060 MYL1P05976 194 aa7.67□□□□□ -1.18
LPCAT3-209ENST00000540060 STAG3L1P0CL83 205 aa7.67□□□□□ -1.18
LPCAT3-209ENST00000540060 IDEP14735 1019 aa7.67□□□□□ -1.18
LPCAT3-209ENST00000540060 MYOGP15173 224 aa7.67□□□□□ -1.18
LPCAT3-209ENST00000540060 LIG1P18858 919 aa7.67□□□□□ -1.18
LPCAT3-209ENST00000540060 SCP2P22307 547 aa7.67□□□□□ -1.18
LPCAT3-209ENST00000540060 NMT1P30419 496 aaKnown RBP7.67□□□□□ -1.18
LPCAT3-209ENST00000540060 AFMP43652 599 aa7.67□□□□□ -1.18
LPCAT3-209ENST00000540060 FXR1P51114 621 aaKnown RBP eCLIP7.67□□□□□ -1.18
LPCAT3-209ENST00000540060 CASP5P51878 434 aa7.67□□□□□ -1.18
LPCAT3-209ENST00000540060 ASIC1P78348 528 aa7.67□□□□□ -1.18
LPCAT3-209ENST00000540060 GTF2BQ00403 316 aa7.67□□□□□ -1.18
LPCAT3-209ENST00000540060 CUL4BQ13620 913 aa7.67□□□□□ -1.18
LPCAT3-209ENST00000540060 GSE1Q14687 1217 aa7.67□□□□□ -1.18
LPCAT3-209ENST00000540060 LAPTM4AQ15012 233 aa7.67□□□□□ -1.18
LPCAT3-209ENST00000540060 NT5DC1Q5TFE4 455 aa7.67□□□□□ -1.18
LPCAT3-209ENST00000540060 EEF1DP3Q658K8 133 aa7.67□□□□□ -1.18
LPCAT3-209ENST00000540060 SLC27A1Q6PCB7 646 aa7.67□□□□□ -1.18
LPCAT3-209ENST00000540060 UNC13DQ70J99 1090 aa7.67□□□□□ -1.18
LPCAT3-209ENST00000540060 CDR2LQ86X02 465 aaPredicted RBP7.67□□□□□ -1.18
LPCAT3-209ENST00000540060 ECHDC2Q86YB7 292 aa7.67□□□□□ -1.18
LPCAT3-209ENST00000540060 MAP4K3Q8IVH8 894 aa7.67□□□□□ -1.18
LPCAT3-209ENST00000540060 FAM178BQ8IXR5 827 aa7.67□□□□□ -1.18
LPCAT3-209ENST00000540060 CCDC65Q8IXS2 484 aa7.67□□□□□ -1.18
LPCAT3-209ENST00000540060 SMG8Q8ND04 991 aaKnown RBP7.67□□□□□ -1.18
LPCAT3-209ENST00000540060 SLC17A8Q8NDX2 589 aa7.67□□□□□ -1.18
LPCAT3-209ENST00000540060 PAGE5Q96GU1 130 aa7.67□□□□□ -1.18
LPCAT3-209ENST00000540060 RAD9AQ99638 391 aa7.67□□□□□ -1.18
LPCAT3-209ENST00000540060 STRA6Q9BX79 667 aa7.67□□□□□ -1.18
LPCAT3-209ENST00000540060 EIF2AQ9BY44 585 aaKnown RBP7.67□□□□□ -1.18
LPCAT3-209ENST00000540060 MRPL4Q9BYD3 311 aaKnown RBP7.67□□□□□ -1.18
LPCAT3-209ENST00000540060 FGFBP2Q9BYJ0 223 aa7.67□□□□□ -1.18
LPCAT3-209ENST00000540060 BLZF1Q9H2G9 400 aa7.67□□□□□ -1.18
LPCAT3-209ENST00000540060 ZHX3Q9H4I2 956 aa7.67□□□□□ -1.18
LPCAT3-209ENST00000540060 RNF19AQ9NV58 838 aa7.67□□□□□ -1.18
LPCAT3-209ENST00000540060 USP20Q9Y2K6 914 aa7.67□□□□□ -1.18
LPCAT3-209ENST00000540060 PCDHB2Q9Y5E7 798 aa7.67□□□□□ -1.18
LPCAT3-209ENST00000540060 ZMYM2Q9UBW7 1377 aa7.67□□□□□ -1.18
LPCAT3-209ENST00000540060 TMEM265A0A087WTH1 108 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms