RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 ART4Q93070 314 aa14.97□□□□□ -0.01
SCNN1A-215ENST00000540037 NSRP1Q9H0G5 558 aaKnown RBP14.97□□□□□ -0.01
SCNN1A-215ENST00000540037 PCIF1Q9H4Z3 704 aa14.97□□□□□ -0.01
SCNN1A-215ENST00000540037 POLLQ9UGP5 575 aa14.97□□□□□ -0.01
SCNN1A-215ENST00000540037 GAKO14976 1311 aa14.97□□□□□ -0.01
SCNN1A-215ENST00000540037 SYNGAP1Q96PV0 1343 aa14.97□□□□□ -0.01
SCNN1A-215ENST00000540037 CETPP11597 493 aa14.97□□□□□ -0.01
SCNN1A-215ENST00000540037 CHRNB2P17787 502 aa14.97□□□□□ -0.01
SCNN1A-215ENST00000540037 MAP2K1Q02750 393 aaPredicted RBP14.97□□□□□ -0.01
SCNN1A-215ENST00000540037 RNASELQ05823 741 aaKnown RBP14.97□□□□□ -0.01
SCNN1A-215ENST00000540037 BNIP1Q12981 228 aa14.97□□□□□ -0.01
SCNN1A-215ENST00000540037 SIX1Q15475 284 aaPredicted RBP14.97□□□□□ -0.01
SCNN1A-215ENST00000540037 TBC1D16Q8TBP0 767 aa14.97□□□□□ -0.01
SCNN1A-215ENST00000540037 ATG4AQ8WYN0 398 aa14.97□□□□□ -0.01
SCNN1A-215ENST00000540037 SPDL1Q96EA4 605 aa14.97□□□□□ -0.01
SCNN1A-215ENST00000540037 SMCHD1A6NHR9 2005 aa14.96□□□□□ -0.01
SCNN1A-215ENST00000540037 RIMBP2O15034 1052 aa14.96□□□□□ -0.01
SCNN1A-215ENST00000540037 ALAS1P13196 640 aa14.96□□□□□ -0.01
SCNN1A-215ENST00000540037 ALADP13716 330 aa14.96□□□□□ -0.01
SCNN1A-215ENST00000540037 VPS41P49754 854 aa14.96□□□□□ -0.01
SCNN1A-215ENST00000540037 TAOK1Q7L7X3 1001 aa14.96□□□□□ -0.01
SCNN1A-215ENST00000540037 PRUNE1Q86TP1 453 aa14.96□□□□□ -0.01
SCNN1A-215ENST00000540037 UBL4BQ8N7F7 174 aa14.96□□□□□ -0.01
SCNN1A-215ENST00000540037 MAB21L3Q8N8X9 362 aa14.96□□□□□ -0.01
SCNN1A-215ENST00000540037 FAM167BQ9BTA0 163 aa14.96□□□□□ -0.01
SCNN1A-215ENST00000540037 DNAJC18Q9H819 358 aa14.96□□□□□ -0.01
SCNN1A-215ENST00000540037 AGPAT3Q9NRZ7 376 aa14.96□□□□□ -0.01
SCNN1A-215ENST00000540037 CLDN3O15551 220 aa14.96□□□□□ -0.01
SCNN1A-215ENST00000540037 SGPL1O95470 568 aa14.96□□□□□ -0.01
SCNN1A-215ENST00000540037 IL1R1P14778 569 aa14.96□□□□□ -0.01
SCNN1A-215ENST00000540037 PEX19P40855 299 aa14.96□□□□□ -0.01
SCNN1A-215ENST00000540037 CACNB3P54284 484 aa14.96□□□□□ -0.01
SCNN1A-215ENST00000540037 UBXN2AP68543 259 aa14.96□□□□□ -0.01
SCNN1A-215ENST00000540037 PPP2R5EQ16537 467 aa14.96□□□□□ -0.01
SCNN1A-215ENST00000540037 KYNUQ16719 465 aa14.96□□□□□ -0.01
SCNN1A-215ENST00000540037 FAM182BQ5T319 152 aa14.96□□□□□ -0.01
SCNN1A-215ENST00000540037 LMO3Q8TAP4 145 aa14.96□□□□□ -0.01
SCNN1A-215ENST00000540037 FIZ1Q96SL8 496 aa14.96□□□□□ -0.01
SCNN1A-215ENST00000540037 NOP53Q9NZM5 478 aaKnown RBP14.96□□□□□ -0.01
SCNN1A-215ENST00000540037 WRAP73Q9P2S5 460 aaPredicted RBP14.96□□□□□ -0.01
SCNN1A-215ENST00000540037 COL16A1Q07092 1604 aaPredicted RBP14.95□□□□□ -0.02
SCNN1A-215ENST00000540037 PODXLO00592 558 aa14.95□□□□□ -0.02
SCNN1A-215ENST00000540037 MSH2P43246 934 aa14.95□□□□□ -0.02
SCNN1A-215ENST00000540037 NFIAQ12857 509 aa14.95□□□□□ -0.02
SCNN1A-215ENST00000540037 RRP1BQ14684 758 aaKnown RBP14.95□□□□□ -0.02
SCNN1A-215ENST00000540037 TBC1D10BQ4KMP7 808 aaPredicted RBP14.95□□□□□ -0.02
SCNN1A-215ENST00000540037 SEL1L2Q5TEA6 688 aa14.95□□□□□ -0.02
SCNN1A-215ENST00000540037 DYDC2Q96IM9 177 aa14.95□□□□□ -0.02
SCNN1A-215ENST00000540037 FAM118BQ9BPY3 351 aa14.95□□□□□ -0.02
SCNN1A-215ENST00000540037 OLFML3Q9NRN5 406 aa14.95□□□□□ -0.02
SCNN1A-215ENST00000540037 ADAM22Q9P0K1 906 aa14.95□□□□□ -0.02
SCNN1A-215ENST00000540037 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.95□□□□□ -0.02
SCNN1A-215ENST00000540037 RPS6KA4O75676 772 aa14.95□□□□□ -0.02
SCNN1A-215ENST00000540037 SUN1O94901 812 aa14.95□□□□□ -0.02
SCNN1A-215ENST00000540037 EYA4O95677 639 aa14.95□□□□□ -0.02
SCNN1A-215ENST00000540037 CALCAP01258 141 aa14.95□□□□□ -0.02
SCNN1A-215ENST00000540037 EEF2P13639 858 aaKnown RBP14.95□□□□□ -0.02
SCNN1A-215ENST00000540037 KIF22Q14807 665 aa14.95□□□□□ -0.02
SCNN1A-215ENST00000540037 FAM47EQ6ZV65 393 aa14.95□□□□□ -0.02
SCNN1A-215ENST00000540037 SPATA21Q7Z572 469 aa14.95□□□□□ -0.02
SCNN1A-215ENST00000540037 SLC13A5Q86YT5 568 aaPredicted RBP14.95□□□□□ -0.02
SCNN1A-215ENST00000540037 FAM163AQ96GL9 167 aaPredicted RBP14.95□□□□□ -0.02
SCNN1A-215ENST00000540037 TMEM109Q9BVC6 243 aa14.95□□□□□ -0.02
SCNN1A-215ENST00000540037 HOMER3Q9NSC5 361 aa14.95□□□□□ -0.02
SCNN1A-215ENST00000540037 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.95□□□□□ -0.02
SCNN1A-215ENST00000540037 WNK3Q9BYP7 1800 aa14.95□□□□□ -0.02
SCNN1A-215ENST00000540037 EXOC3O60645 756 aa14.95□□□□□ -0.02
SCNN1A-215ENST00000540037 SLC8A3P57103 927 aa14.95□□□□□ -0.02
SCNN1A-215ENST00000540037 SLMAPQ14BN4 828 aa14.95□□□□□ -0.02
SCNN1A-215ENST00000540037 BTNL9Q6UXG8 535 aa14.95□□□□□ -0.02
SCNN1A-215ENST00000540037 C1orf186Q6ZWK4 172 aa14.95□□□□□ -0.02
SCNN1A-215ENST00000540037 RHOT2Q8IXI1 618 aa14.95□□□□□ -0.02
SCNN1A-215ENST00000540037 TGS1Q96RS0 853 aaKnown RBP14.95□□□□□ -0.02
SCNN1A-215ENST00000540037 ARHGEF3Q9NR81 526 aa14.95□□□□□ -0.02
SCNN1A-215ENST00000540037 GGA1Q9UJY5 639 aa14.95□□□□□ -0.02
SCNN1A-215ENST00000540037 FRMD4BQ9Y2L6 1034 aa14.95□□□□□ -0.02
SCNN1A-215ENST00000540037 C6orf229H3BNL8 230 aa14.94□□□□□ -0.02
SCNN1A-215ENST00000540037 SPOPO43791 374 aa14.94□□□□□ -0.02
SCNN1A-215ENST00000540037 SLITRK3O94933 977 aa14.94□□□□□ -0.02
SCNN1A-215ENST00000540037 GCLMP48507 274 aa14.94□□□□□ -0.02
SCNN1A-215ENST00000540037 GPC5P78333 572 aa14.94□□□□□ -0.02
SCNN1A-215ENST00000540037 KRT17Q04695 432 aa14.94□□□□□ -0.02
SCNN1A-215ENST00000540037 ZNF568Q3ZCX4 644 aa14.94□□□□□ -0.02
SCNN1A-215ENST00000540037 DAB2IPQ5VWQ8 1189 aa14.94□□□□□ -0.02
SCNN1A-215ENST00000540037 MFSD5Q6N075 450 aa14.94□□□□□ -0.02
SCNN1A-215ENST00000540037 RNF207Q6ZRF8 634 aa14.94□□□□□ -0.02
SCNN1A-215ENST00000540037 MIGA2Q7L4E1 593 aa14.94□□□□□ -0.02
SCNN1A-215ENST00000540037 PHLDB2Q86SQ0 1253 aa14.94□□□□□ -0.02
SCNN1A-215ENST00000540037 UTP4Q969X6 686 aaKnown RBP14.94□□□□□ -0.02
SCNN1A-215ENST00000540037 NAP1L4Q99733 375 aaKnown RBP14.94□□□□□ -0.02
SCNN1A-215ENST00000540037 HERPUD2Q9BSE4 406 aa14.94□□□□□ -0.02
SCNN1A-215ENST00000540037 SLC5A4Q9NY91 659 aa14.94□□□□□ -0.02
SCNN1A-215ENST00000540037 NKX1-2Q9UD57 310 aaPredicted RBP14.94□□□□□ -0.02
SCNN1A-215ENST00000540037 EMSYQ7Z589 1322 aa14.94□□□□□ -0.02
SCNN1A-215ENST00000540037 CNTNAP4Q9C0A0 1308 aa14.94□□□□□ -0.02
SCNN1A-215ENST00000540037 BRAFP15056 766 aa14.94□□□□□ -0.02
SCNN1A-215ENST00000540037 PPP3CAQ08209 521 aa14.94□□□□□ -0.02
SCNN1A-215ENST00000540037 TCP10Q12799 353 aa14.94□□□□□ -0.02
SCNN1A-215ENST00000540037 Q4G0T1 1027 aa14.94□□□□□ -0.02
SCNN1A-215ENST00000540037 C11orf63Q6NUN7 778 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms