RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 PPP1R12CQ9BZL4 782 aa20.73■□□□□ 0.91
TNFRSF1A-213ENST00000540022 PRKAG2Q9UGJ0 569 aa20.73■□□□□ 0.91
TNFRSF1A-213ENST00000540022 NOC2LQ9Y3T9 749 aaKnown RBP20.73■□□□□ 0.91
TNFRSF1A-213ENST00000540022 IKBKBO14920 756 aa20.72■□□□□ 0.91
TNFRSF1A-213ENST00000540022 CALUO43852 315 aaPredicted RBP20.72■□□□□ 0.91
TNFRSF1A-213ENST00000540022 TSPAN1O60635 241 aa20.72■□□□□ 0.91
TNFRSF1A-213ENST00000540022 LIG4P49917 911 aa20.72■□□□□ 0.91
TNFRSF1A-213ENST00000540022 BFSP2Q13515 415 aa20.72■□□□□ 0.91
TNFRSF1A-213ENST00000540022 PRPF4BQ13523 1007 aaKnown RBP20.72■□□□□ 0.91
TNFRSF1A-213ENST00000540022 FBXO47Q5MNV8 452 aa20.72■□□□□ 0.91
TNFRSF1A-213ENST00000540022 SPATA1Q5VX52 437 aa20.72■□□□□ 0.91
TNFRSF1A-213ENST00000540022 FOXR2Q6PJQ5 311 aa20.72■□□□□ 0.91
TNFRSF1A-213ENST00000540022 ZPBP2Q6X784 338 aa20.72■□□□□ 0.91
TNFRSF1A-213ENST00000540022 HS2ST1Q7LGA3 356 aa20.72■□□□□ 0.91
TNFRSF1A-213ENST00000540022 CATSPER4Q7RTX7 472 aa20.72■□□□□ 0.91
TNFRSF1A-213ENST00000540022 FAM228AQ86W67 206 aa20.72■□□□□ 0.91
TNFRSF1A-213ENST00000540022 CCDC155Q8N6L0 562 aa20.72■□□□□ 0.91
TNFRSF1A-213ENST00000540022 ACO2Q99798 780 aaKnown RBP20.72■□□□□ 0.91
TNFRSF1A-213ENST00000540022 NFE2L3Q9Y4A8 694 aa20.72■□□□□ 0.91
TNFRSF1A-213ENST00000540022 ERLIN2O94905 339 aa20.71■□□□□ 0.91
TNFRSF1A-213ENST00000540022 SFPQP23246 707 aaKnown RBP eCLIP20.71■□□□□ 0.91
TNFRSF1A-213ENST00000540022 ADSSP30520 456 aa20.71■□□□□ 0.91
TNFRSF1A-213ENST00000540022 CYP2C18P33260 490 aa20.71■□□□□ 0.91
TNFRSF1A-213ENST00000540022 MBTPS1Q14703 1052 aa20.71■□□□□ 0.91
TNFRSF1A-213ENST00000540022 EDRF1Q3B7T1 1238 aa20.71■□□□□ 0.91
TNFRSF1A-213ENST00000540022 EEF2KMTQ96G04 330 aa20.71■□□□□ 0.91
TNFRSF1A-213ENST00000540022 ZBTB45Q96K62 511 aaPredicted RBP20.71■□□□□ 0.91
TNFRSF1A-213ENST00000540022 CBWD1Q9BRT8 395 aa20.71■□□□□ 0.91
TNFRSF1A-213ENST00000540022 UBE2OQ9C0C9 1292 aaKnown RBP20.71■□□□□ 0.91
TNFRSF1A-213ENST00000540022 CNTNAP2Q9UHC6 1331 aa20.71■□□□□ 0.91
TNFRSF1A-213ENST00000540022 BECN2A8MW95 431 aa20.7■□□□□ 0.9
TNFRSF1A-213ENST00000540022 PITPNM1O00562 1244 aa20.7■□□□□ 0.9
TNFRSF1A-213ENST00000540022 RPS6KA5O75582 802 aa20.7■□□□□ 0.9
TNFRSF1A-213ENST00000540022 GHRP10912 638 aa20.7■□□□□ 0.9
TNFRSF1A-213ENST00000540022 SELPP16109 830 aa20.7■□□□□ 0.9
TNFRSF1A-213ENST00000540022 ARF4P18085 180 aaPredicted RBP20.7■□□□□ 0.9
TNFRSF1A-213ENST00000540022 SNRPFP62306 86 aaKnown RBP20.7■□□□□ 0.9
TNFRSF1A-213ENST00000540022 PCBP1Q15365 356 aaKnown RBP eCLIP20.7■□□□□ 0.92e-7■■■□□ 16.3
TNFRSF1A-213ENST00000540022 ATF7IP2Q5U623 682 aa20.7■□□□□ 0.9
TNFRSF1A-213ENST00000540022 LRRC8DQ7L1W4 858 aa20.7■□□□□ 0.9
TNFRSF1A-213ENST00000540022 CDR2LQ86X02 465 aaPredicted RBP20.7■□□□□ 0.9
TNFRSF1A-213ENST00000540022 CSGALNACT2Q8N6G5 542 aa20.7■□□□□ 0.9
TNFRSF1A-213ENST00000540022 GOLGA5Q8TBA6 731 aa20.7■□□□□ 0.9
TNFRSF1A-213ENST00000540022 CPB2Q96IY4 423 aa20.7■□□□□ 0.9
TNFRSF1A-213ENST00000540022 HIPK3Q9H422 1215 aa20.7■□□□□ 0.9
TNFRSF1A-213ENST00000540022 AGO3Q9H9G7 860 aaKnown RBP20.7■□□□□ 0.9
TNFRSF1A-213ENST00000540022 CGNQ9P2M7 1197 aaKnown RBP20.7■□□□□ 0.9
TNFRSF1A-213ENST00000540022 STYXL1Q9Y6J8 313 aa20.7■□□□□ 0.9
TNFRSF1A-213ENST00000540022 SMTNL1A8MU46 457 aa20.69■□□□□ 0.9
TNFRSF1A-213ENST00000540022 KIAA0355O15063 1070 aa20.69■□□□□ 0.9
TNFRSF1A-213ENST00000540022 NR3C1P04150 777 aa20.69■□□□□ 0.9
TNFRSF1A-213ENST00000540022 NR2F2P24468 414 aa20.69■□□□□ 0.9
TNFRSF1A-213ENST00000540022 HOXA11P31270 313 aaPredicted RBP20.69■□□□□ 0.9
TNFRSF1A-213ENST00000540022 FKBP3Q00688 224 aaKnown RBP20.69■□□□□ 0.9
TNFRSF1A-213ENST00000540022 LPIN1Q14693 890 aa20.69■□□□□ 0.9
TNFRSF1A-213ENST00000540022 NFIL3Q16649 462 aa20.69■□□□□ 0.9
TNFRSF1A-213ENST00000540022 TPD52L1Q16890 204 aaPredicted RBP20.69■□□□□ 0.9
TNFRSF1A-213ENST00000540022 EEF1DP3Q658K8 133 aa20.69■□□□□ 0.9
TNFRSF1A-213ENST00000540022 ARMCX5Q6P1M9 558 aa20.69■□□□□ 0.9
TNFRSF1A-213ENST00000540022 LRRC55Q6ZSA7 311 aa20.69■□□□□ 0.9
TNFRSF1A-213ENST00000540022 TSHZ1Q6ZSZ6 1077 aa20.69■□□□□ 0.9
TNFRSF1A-213ENST00000540022 C12orf56Q8IXR9 622 aa20.69■□□□□ 0.9
TNFRSF1A-213ENST00000540022 ZC3H3Q8IXZ2 948 aaKnown RBP20.69■□□□□ 0.9
TNFRSF1A-213ENST00000540022 TDHQ8IZJ6 230 aa20.69■□□□□ 0.9
TNFRSF1A-213ENST00000540022 LBHD1Q9BQE6 289 aaPredicted RBP20.69■□□□□ 0.9
TNFRSF1A-213ENST00000540022 SRRTQ9BXP5 876 aaKnown RBP20.69■□□□□ 0.9
TNFRSF1A-213ENST00000540022 HAPLN2Q9GZV7 340 aa20.69■□□□□ 0.9
TNFRSF1A-213ENST00000540022 WNT8AQ9H1J5 351 aa20.69■□□□□ 0.9
TNFRSF1A-213ENST00000540022 HSD3B7Q9H2F3 369 aa20.69■□□□□ 0.9
TNFRSF1A-213ENST00000540022 PCIF1Q9H4Z3 704 aa20.69■□□□□ 0.9
TNFRSF1A-213ENST00000540022 PTPRHQ9HD43 1115 aa20.69■□□□□ 0.9
TNFRSF1A-213ENST00000540022 SAMSN1Q9NSI8 373 aaKnown RBP20.69■□□□□ 0.9
TNFRSF1A-213ENST00000540022 FANCLQ9NW38 375 aa20.69■□□□□ 0.9
TNFRSF1A-213ENST00000540022 DMAC2Q9NW81 257 aa20.69■□□□□ 0.9
TNFRSF1A-213ENST00000540022 TNFSF13BQ9Y275 285 aa20.69■□□□□ 0.9
TNFRSF1A-213ENST00000540022 ABLIM1O14639 778 aa20.68■□□□□ 0.9
TNFRSF1A-213ENST00000540022 TOM1L1O75674 476 aa20.68■□□□□ 0.9
TNFRSF1A-213ENST00000540022 PROZP22891 400 aa20.68■□□□□ 0.9
TNFRSF1A-213ENST00000540022 CCL23P55773 120 aa20.68■□□□□ 0.9
TNFRSF1A-213ENST00000540022 ADAM9Q13443 819 aa20.68■□□□□ 0.9
TNFRSF1A-213ENST00000540022 TMEM132AQ24JP5 1023 aa20.68■□□□□ 0.9
TNFRSF1A-213ENST00000540022 SCLYQ96I15 445 aa20.68■□□□□ 0.9
TNFRSF1A-213ENST00000540022 AGPAT5Q9NUQ2 364 aa20.68■□□□□ 0.9
TNFRSF1A-213ENST00000540022 ANKFY1Q9P2R3 1169 aa20.68■□□□□ 0.9
TNFRSF1A-213ENST00000540022 ST3GAL5Q9UNP4 418 aa20.68■□□□□ 0.9
TNFRSF1A-213ENST00000540022 SQORQ9Y6N5 450 aa20.68■□□□□ 0.9
TNFRSF1A-213ENST00000540022 SIP14410 1827 aa20.68■□□□□ 0.9
TNFRSF1A-213ENST00000540022 A0A1B0GUA9 196 aa20.68■□□□□ 0.9
TNFRSF1A-213ENST00000540022 SOX1O00570 391 aaPredicted RBP20.68■□□□□ 0.9
TNFRSF1A-213ENST00000540022 GARTP22102 1010 aa20.68■□□□□ 0.9
TNFRSF1A-213ENST00000540022 CD52P31358 61 aa20.68■□□□□ 0.9
TNFRSF1A-213ENST00000540022 GPNMBQ14956 572 aa20.68■□□□□ 0.9
TNFRSF1A-213ENST00000540022 SLC9A9Q8IVB4 645 aa20.68■□□□□ 0.9
TNFRSF1A-213ENST00000540022 ZSWIM2Q8NEG5 633 aa20.68■□□□□ 0.9
TNFRSF1A-213ENST00000540022 TMEM174Q8WUU8 243 aa20.68■□□□□ 0.9
TNFRSF1A-213ENST00000540022 POMGNT1Q8WZA1 660 aa20.68■□□□□ 0.9
TNFRSF1A-213ENST00000540022 PDZD7Q9H5P4 517 aa20.68■□□□□ 0.9
TNFRSF1A-213ENST00000540022 PADI3Q9ULW8 664 aa20.68■□□□□ 0.9
TNFRSF1A-213ENST00000540022 A0A0B4J269 797 aa20.67■□□□□ 0.9
TNFRSF1A-213ENST00000540022 CLDN3O15551 220 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms