RNA–Protein interactions for RNA: ENST00000539945.5

MDH1-215, Transcript of malate dehydrogenase 1, humanhuman

TSL 2 BASIC

Gene MDH1, Length 1,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-215ENST00000539945 CDK17Q00537 523 aa10.56□□□□□ -0.72
MDH1-215ENST00000539945 SREBF2Q12772 1141 aa10.56□□□□□ -0.72
MDH1-215ENST00000539945 PPP2R5AQ15172 486 aa10.56□□□□□ -0.72
MDH1-215ENST00000539945 MEA1Q16626 185 aa10.56□□□□□ -0.72
MDH1-215ENST00000539945 TMEM63BQ5T3F8 832 aa10.56□□□□□ -0.72
MDH1-215ENST00000539945 LCE2CQ5TA81 110 aa10.56□□□□□ -0.72
MDH1-215ENST00000539945 SMC1BQ8NDV3 1235 aa10.56□□□□□ -0.72
MDH1-215ENST00000539945 NEK11Q8NG66 645 aa10.56□□□□□ -0.72
MDH1-215ENST00000539945 SLC35C1Q96A29 364 aa10.56□□□□□ -0.72
MDH1-215ENST00000539945 PPP1R13BQ96KQ4 1090 aa10.56□□□□□ -0.72
MDH1-215ENST00000539945 ABHD16BQ9H3Z7 469 aa10.56□□□□□ -0.72
MDH1-215ENST00000539945 MMRN2Q9H8L6 949 aa10.56□□□□□ -0.72
MDH1-215ENST00000539945 GPBP1L1Q9HC44 474 aaPredicted RBP10.56□□□□□ -0.72
MDH1-215ENST00000539945 AGPAT5Q9NUQ2 364 aa10.56□□□□□ -0.72
MDH1-215ENST00000539945 TRMT1Q9NXH9 659 aaKnown RBP10.56□□□□□ -0.72
MDH1-215ENST00000539945 ARHGAP28Q9P2N2 729 aa10.56□□□□□ -0.72
MDH1-215ENST00000539945 NXF1Q9UBU9 619 aaKnown RBP10.56□□□□□ -0.72
MDH1-215ENST00000539945 SOWAHDA6NJG2 315 aa10.55□□□□□ -0.72
MDH1-215ENST00000539945 ZBTB42B2RXF5 422 aa10.55□□□□□ -0.72
MDH1-215ENST00000539945 GAS2O43903 313 aaKnown RBP10.55□□□□□ -0.72
MDH1-215ENST00000539945 EXOC3O60645 756 aa10.55□□□□□ -0.72
MDH1-215ENST00000539945 GLRA2P23416 452 aa10.55□□□□□ -0.72
MDH1-215ENST00000539945 NAMPTP43490 491 aa10.55□□□□□ -0.72
MDH1-215ENST00000539945 TM4SF4P48230 202 aa10.55□□□□□ -0.72
MDH1-215ENST00000539945 MAP2K5Q13163 448 aa10.55□□□□□ -0.72
MDH1-215ENST00000539945 PLCB4Q15147 1175 aa10.55□□□□□ -0.72
MDH1-215ENST00000539945 DUSP28Q4G0W2 176 aa10.55□□□□□ -0.72
MDH1-215ENST00000539945 BRDTQ58F21 947 aaPredicted RBP10.55□□□□□ -0.72
MDH1-215ENST00000539945 DNTTIP2Q5QJE6 756 aaKnown RBP10.55□□□□□ -0.72
MDH1-215ENST00000539945 IQSEC1Q6DN90 963 aa10.55□□□□□ -0.72
MDH1-215ENST00000539945 RAD9BQ6WBX8 426 aa10.55□□□□□ -0.72
MDH1-215ENST00000539945 CCDC155Q8N6L0 562 aa10.55□□□□□ -0.72
MDH1-215ENST00000539945 XXYLT1Q8NBI6 393 aa10.55□□□□□ -0.72
MDH1-215ENST00000539945 PPTC7Q8NI37 304 aa10.55□□□□□ -0.72
MDH1-215ENST00000539945 NPLOC4Q8TAT6 608 aa10.55□□□□□ -0.72
MDH1-215ENST00000539945 USP6NLQ92738 828 aa10.55□□□□□ -0.72
MDH1-215ENST00000539945 TMEM143Q96AN5 459 aa10.55□□□□□ -0.72
MDH1-215ENST00000539945 ZFYVE28Q9HCC9 887 aa10.55□□□□□ -0.72
MDH1-215ENST00000539945 PLCB1Q9NQ66 1216 aa10.55□□□□□ -0.72
MDH1-215ENST00000539945 FAM207AQ9NSI2 230 aaPredicted RBP10.55□□□□□ -0.72
MDH1-215ENST00000539945 ZNHIT6Q9NWK9 470 aaKnown RBP10.55□□□□□ -0.72
MDH1-215ENST00000539945 PPP2R2CQ9Y2T4 447 aa10.55□□□□□ -0.72
MDH1-215ENST00000539945 ADGRA3Q8IWK6 1321 aa10.55□□□□□ -0.72
MDH1-215ENST00000539945 IGKV6-21A0A0C4DH24 114 aa10.54□□□□□ -0.72
MDH1-215ENST00000539945 GOLGA6L9A6NEM1 432 aa10.54□□□□□ -0.72
MDH1-215ENST00000539945 KIF2AO00139 706 aaPredicted RBP10.54□□□□□ -0.72
MDH1-215ENST00000539945 EPHB6O15197 1021 aa10.54□□□□□ -0.72
MDH1-215ENST00000539945 HBP1O60381 514 aa10.54□□□□□ -0.72
MDH1-215ENST00000539945 PPFIA4O75335 1185 aa10.54□□□□□ -0.72
MDH1-215ENST00000539945 NOL4O94818 638 aa10.54□□□□□ -0.72
MDH1-215ENST00000539945 TUBB4AP04350 444 aa10.54□□□□□ -0.72
MDH1-215ENST00000539945 CNGA1P29973 690 aa10.54□□□□□ -0.72
MDH1-215ENST00000539945 ADCYAP1R1P41586 468 aa10.54□□□□□ -0.72
MDH1-215ENST00000539945 MMP16P51512 607 aa10.54□□□□□ -0.72
MDH1-215ENST00000539945 ACVR2BQ13705 512 aa10.54□□□□□ -0.72
MDH1-215ENST00000539945 MTF1Q14872 753 aa10.54□□□□□ -0.72
MDH1-215ENST00000539945 PTPN14Q15678 1187 aa10.54□□□□□ -0.72
MDH1-215ENST00000539945 DCAF17Q5H9S7 520 aaPredicted RBP10.54□□□□□ -0.72
MDH1-215ENST00000539945 IER5Q5VY09 327 aa10.54□□□□□ -0.72
MDH1-215ENST00000539945 WDR59Q6PJI9 974 aa10.54□□□□□ -0.72
MDH1-215ENST00000539945 TOGARAM2Q6ZUX3 1019 aa10.54□□□□□ -0.72
MDH1-215ENST00000539945 INTS8Q75QN2 995 aaKnown RBP10.54□□□□□ -0.72
MDH1-215ENST00000539945 TRIM50Q86XT4 487 aa10.54□□□□□ -0.72
MDH1-215ENST00000539945 REXO1L1PQ8IX06 675 aa10.54□□□□□ -0.72
MDH1-215ENST00000539945 ASAP3Q8TDY4 903 aa10.54□□□□□ -0.72
MDH1-215ENST00000539945 BAP1Q92560 729 aa10.54□□□□□ -0.72
MDH1-215ENST00000539945 HPS1Q92902 700 aa10.54□□□□□ -0.72
MDH1-215ENST00000539945 C16orf45Q96MC5 204 aaPredicted RBP10.54□□□□□ -0.72
MDH1-215ENST00000539945 JPH2Q9BR39 696 aaPredicted RBP10.54□□□□□ -0.72
MDH1-215ENST00000539945 CBWD1Q9BRT8 395 aa10.54□□□□□ -0.72
MDH1-215ENST00000539945 KIFC3Q9BVG8 833 aa10.54□□□□□ -0.72
MDH1-215ENST00000539945 NUCKS1Q9H1E3 243 aaKnown RBP10.54□□□□□ -0.72
MDH1-215ENST00000539945 ERAP1Q9NZ08 941 aa10.54□□□□□ -0.72
MDH1-215ENST00000539945 HSPBP1Q9NZL4 362 aa10.54□□□□□ -0.72
MDH1-215ENST00000539945 CEP72Q9P209 647 aa10.54□□□□□ -0.72
MDH1-215ENST00000539945 ABT1Q9ULW3 272 aaKnown RBP10.54□□□□□ -0.72
MDH1-215ENST00000539945 PLAGL2Q9UPG8 496 aa10.54□□□□□ -0.72
MDH1-215ENST00000539945 TMEM88BA6NKF7 163 aa10.53□□□□□ -0.72
MDH1-215ENST00000539945 TISP43B9A030 160 aa10.53□□□□□ -0.72
MDH1-215ENST00000539945 ANKRD63C9JTQ0 380 aa10.53□□□□□ -0.72
MDH1-215ENST00000539945 CCDC175P0C221 793 aa10.53□□□□□ -0.72
MDH1-215ENST00000539945 HOXD8P13378 290 aaPredicted RBP10.53□□□□□ -0.72
MDH1-215ENST00000539945 KRT13P13646 458 aa10.53□□□□□ -0.72
MDH1-215ENST00000539945 MARK3P27448 753 aa10.53□□□□□ -0.72
MDH1-215ENST00000539945 ADSSP30520 456 aa10.53□□□□□ -0.72
MDH1-215ENST00000539945 BFSP1Q12934 665 aa10.53□□□□□ -0.72
MDH1-215ENST00000539945 EXOC3L4Q17RC7 722 aa10.53□□□□□ -0.72
MDH1-215ENST00000539945 ZNF484Q5JVG2 852 aa10.53□□□□□ -0.72
MDH1-215ENST00000539945 TCERG1LQ5VWI1 586 aa10.53□□□□□ -0.72
MDH1-215ENST00000539945 DPY19L2P1Q6NXN4 242 aa10.53□□□□□ -0.72
MDH1-215ENST00000539945 RNF19BQ6ZMZ0 732 aa10.53□□□□□ -0.72
MDH1-215ENST00000539945 GBP6Q6ZN66 633 aa10.53□□□□□ -0.72
MDH1-215ENST00000539945 TAS1R3Q7RTX0 852 aa10.53□□□□□ -0.72
MDH1-215ENST00000539945 DEPTORQ8TB45 409 aa10.53□□□□□ -0.72
MDH1-215ENST00000539945 AFG1LQ8WV93 481 aa10.53□□□□□ -0.72
MDH1-215ENST00000539945 TCP11Q8WWU5 503 aa10.53□□□□□ -0.72
MDH1-215ENST00000539945 SYN2Q92777 582 aaPredicted RBP10.53□□□□□ -0.72
MDH1-215ENST00000539945 CHP1Q99653 195 aa10.53□□□□□ -0.72
MDH1-215ENST00000539945 CRACR2AQ9BSW2 395 aa10.53□□□□□ -0.72
MDH1-215ENST00000539945 LSM14BQ9BX40 385 aaKnown RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms