RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 LRRIQ4A6NIV6 560 aa18.58■□□□□ 0.56
DDB1-215ENST00000539712 CLASP2O75122 1294 aaKnown RBP18.58■□□□□ 0.56
DDB1-215ENST00000539712 POMCP01189 267 aa18.58■□□□□ 0.56
DDB1-215ENST00000539712 EDN1P05305 212 aa18.58■□□□□ 0.56
DDB1-215ENST00000539712 ITGA4P13612 1032 aa18.58■□□□□ 0.56
DDB1-215ENST00000539712 CDC25AP30304 524 aa18.58■□□□□ 0.56
DDB1-215ENST00000539712 PRPHP41219 470 aa18.58■□□□□ 0.56
DDB1-215ENST00000539712 MCM2P49736 904 aa18.58■□□□□ 0.56
DDB1-215ENST00000539712 RNASELQ05823 741 aaKnown RBP18.58■□□□□ 0.56
DDB1-215ENST00000539712 SMC1AQ14683 1233 aaKnown RBP18.58■□□□□ 0.56
DDB1-215ENST00000539712 FAM187BQ17R55 369 aa18.58■□□□□ 0.56
DDB1-215ENST00000539712 HAUS3Q68CZ6 603 aa18.58■□□□□ 0.56
DDB1-215ENST00000539712 URGCPQ8TCY9 931 aa18.58■□□□□ 0.56
DDB1-215ENST00000539712 AUTS2Q8WXX7 1259 aa18.58■□□□□ 0.56
DDB1-215ENST00000539712 ZFP42Q96MM3 310 aa18.58■□□□□ 0.56
DDB1-215ENST00000539712 GAD1Q99259 594 aa18.58■□□□□ 0.56
DDB1-215ENST00000539712 CCDC113Q9H0I3 377 aa18.58■□□□□ 0.56
DDB1-215ENST00000539712 NXF3Q9H4D5 531 aaKnown RBP18.58■□□□□ 0.56
DDB1-215ENST00000539712 UPF2Q9HAU5 1272 aaKnown RBP18.58■□□□□ 0.56
DDB1-215ENST00000539712 KANSL3Q9P2N6 904 aa18.58■□□□□ 0.56
DDB1-215ENST00000539712 IRAK3Q9Y616 596 aa18.58■□□□□ 0.56
DDB1-215ENST00000539712 LAD1O00515 517 aa18.57■□□□□ 0.56
DDB1-215ENST00000539712 CXCL14O95715 111 aa18.57■□□□□ 0.56
DDB1-215ENST00000539712 EFEMP2O95967 443 aa18.57■□□□□ 0.56
DDB1-215ENST00000539712 CTSAP10619 480 aa18.57■□□□□ 0.56
DDB1-215ENST00000539712 DSC1Q08554 894 aa18.57■□□□□ 0.56
DDB1-215ENST00000539712 MCTP1Q6DN14 999 aa18.57■□□□□ 0.56
DDB1-215ENST00000539712 ANKRD54Q6NXT1 300 aa18.57■□□□□ 0.56
DDB1-215ENST00000539712 COLGALT2Q8IYK4 626 aa18.57■□□□□ 0.56
DDB1-215ENST00000539712 TMEM175Q9BSA9 504 aa18.57■□□□□ 0.56
DDB1-215ENST00000539712 BHMT2Q9H2M3 363 aa18.57■□□□□ 0.56
DDB1-215ENST00000539712 UBN1Q9NPG3 1134 aa18.57■□□□□ 0.56
DDB1-215ENST00000539712 DDX19AQ9NUU7 478 aaKnown RBP18.57■□□□□ 0.56
DDB1-215ENST00000539712 RAPGEFL1Q9UHV5 662 aa18.57■□□□□ 0.56
DDB1-215ENST00000539712 USP20Q9Y2K6 914 aa18.57■□□□□ 0.56
DDB1-215ENST00000539712 KIF3AQ9Y496 699 aa18.57■□□□□ 0.56
DDB1-215ENST00000539712 FSD2A1L4K1 749 aa18.56■□□□□ 0.56
DDB1-215ENST00000539712 NRP1O14786 923 aa18.56■□□□□ 0.56
DDB1-215ENST00000539712 LILRB3O75022 631 aa18.56■□□□□ 0.56
DDB1-215ENST00000539712 ALDH2P05091 517 aa18.56■□□□□ 0.56
DDB1-215ENST00000539712 MLH1P40692 756 aa18.56■□□□□ 0.56
DDB1-215ENST00000539712 ATP2C1P98194 919 aaPredicted RBP18.56■□□□□ 0.56
DDB1-215ENST00000539712 NCBP1Q09161 790 aaKnown RBP18.56■□□□□ 0.56
DDB1-215ENST00000539712 RILPL1Q5EBL4 403 aa18.56■□□□□ 0.56
DDB1-215ENST00000539712 LLGL2Q6P1M3 1020 aa18.56■□□□□ 0.56
DDB1-215ENST00000539712 SLC27A1Q6PCB7 646 aa18.56■□□□□ 0.56
DDB1-215ENST00000539712 KCNK18Q7Z418 384 aa18.56■□□□□ 0.56
DDB1-215ENST00000539712 SNX29Q8TEQ0 813 aa18.56■□□□□ 0.56
DDB1-215ENST00000539712 PRIMPOLQ96LW4 560 aa18.56■□□□□ 0.56
DDB1-215ENST00000539712 LRFN3Q9BTN0 628 aa18.56■□□□□ 0.56
DDB1-215ENST00000539712 MARCH5Q9NX47 278 aa18.56■□□□□ 0.56
DDB1-215ENST00000539712 HCFC2Q9Y5Z7 792 aa18.56■□□□□ 0.56
DDB1-215ENST00000539712 CARNS1A5YM72 827 aa18.55■□□□□ 0.56
DDB1-215ENST00000539712 E9PMD0 336 aa18.55■□□□□ 0.56
DDB1-215ENST00000539712 GPR37L1O60883 481 aa18.55■□□□□ 0.56
DDB1-215ENST00000539712 NPTXRO95502 500 aa18.55■□□□□ 0.56
DDB1-215ENST00000539712 COL9A1P20849 921 aa18.55■□□□□ 0.56
DDB1-215ENST00000539712 AKAP5P24588 427 aa18.55■□□□□ 0.56
DDB1-215ENST00000539712 NAMPTP43490 491 aa18.55■□□□□ 0.56
DDB1-215ENST00000539712 SCNN1GP51170 649 aa18.55■□□□□ 0.56
DDB1-215ENST00000539712 DTHD1Q6ZMT9 781 aa18.55■□□□□ 0.56
DDB1-215ENST00000539712 DAW1Q8N136 415 aa18.55■□□□□ 0.56
DDB1-215ENST00000539712 KIFC3Q9BVG8 833 aa18.55■□□□□ 0.56
DDB1-215ENST00000539712 APOL6Q9BWW8 343 aa18.55■□□□□ 0.56
DDB1-215ENST00000539712 PDZD7Q9H5P4 517 aa18.55■□□□□ 0.56
DDB1-215ENST00000539712 PRMT7Q9NVM4 692 aaPredicted RBP18.55■□□□□ 0.56
DDB1-215ENST00000539712 FAN1Q9Y2M0 1017 aa18.55■□□□□ 0.56
DDB1-215ENST00000539712 GIT1Q9Y2X7 761 aa18.55■□□□□ 0.56
DDB1-215ENST00000539712 FAM86C2PA6NEL3 165 aa18.54■□□□□ 0.56
DDB1-215ENST00000539712 LOC730098B7Z3J9 87 aa18.54■□□□□ 0.56
DDB1-215ENST00000539712 F8W810 466 aa18.54■□□□□ 0.56
DDB1-215ENST00000539712 CUL4AQ13619 759 aa18.54■□□□□ 0.56
DDB1-215ENST00000539712 CBX2Q14781 532 aaPredicted RBP18.54■□□□□ 0.56
DDB1-215ENST00000539712 PTPN14Q15678 1187 aa18.54■□□□□ 0.56
DDB1-215ENST00000539712 TAS1R1Q7RTX1 841 aa18.54■□□□□ 0.56
DDB1-215ENST00000539712 RNF168Q8IYW5 571 aaPredicted RBP18.54■□□□□ 0.56
DDB1-215ENST00000539712 SLC22A17Q8WUG5 538 aa18.54■□□□□ 0.56
DDB1-215ENST00000539712 CXCL16Q9H2A7 254 aa18.54■□□□□ 0.56
DDB1-215ENST00000539712 CDH22Q9UJ99 828 aa18.54■□□□□ 0.56
DDB1-215ENST00000539712 SMC3Q9UQE7 1217 aa18.54■□□□□ 0.56
DDB1-215ENST00000539712 WDFY4Q6ZS81 3184 aa18.54■□□□□ 0.56
DDB1-215ENST00000539712 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.53■□□□□ 0.56
DDB1-215ENST00000539712 ACKR2O00590 384 aa18.53■□□□□ 0.56
DDB1-215ENST00000539712 HOXB8P17481 243 aaPredicted RBP18.53■□□□□ 0.56
DDB1-215ENST00000539712 MAPK7Q13164 816 aa18.53■□□□□ 0.56
DDB1-215ENST00000539712 HYIQ5T013 277 aa18.53■□□□□ 0.56
DDB1-215ENST00000539712 NT5DC1Q5TFE4 455 aa18.53■□□□□ 0.56
DDB1-215ENST00000539712 KRT79Q5XKE5 535 aa18.53■□□□□ 0.56
DDB1-215ENST00000539712 EEF1DP3Q658K8 133 aa18.53■□□□□ 0.56
DDB1-215ENST00000539712 RNF135Q8IUD6 432 aa18.53■□□□□ 0.56
DDB1-215ENST00000539712 ZBTB8OSQ8IWT0 167 aa18.53■□□□□ 0.56
DDB1-215ENST00000539712 FEZF2Q8TBJ5 459 aa18.53■□□□□ 0.56
DDB1-215ENST00000539712 PNMA5Q96PV4 448 aa18.53■□□□□ 0.56
DDB1-215ENST00000539712 FAM193BQ96PV7 902 aaPredicted RBP18.53■□□□□ 0.56
DDB1-215ENST00000539712 POP1Q99575 1024 aaKnown RBP18.53■□□□□ 0.56
DDB1-215ENST00000539712 RUSC1Q9BVN2 902 aa18.53■□□□□ 0.56
DDB1-215ENST00000539712 APOL5Q9BWW9 433 aa18.53■□□□□ 0.56
DDB1-215ENST00000539712 RAB34Q9BZG1 259 aa18.53■□□□□ 0.56
DDB1-215ENST00000539712 TRIM6Q9C030 488 aaPredicted RBP18.53■□□□□ 0.56
DDB1-215ENST00000539712 C2orf40Q9H1Z8 148 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms