RNA–Protein interactions for RNA: ENST00000539662.1

HMGA2-209, Transcript of high mobility group AT-hook 2, humanhuman

TSL 3

Gene HMGA2, Length 485 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-209ENST00000539662 TFF2Q03403 129 aa11.81□□□□□ -0.52
HMGA2-209ENST00000539662 PRPF4BQ13523 1007 aaKnown RBP11.81□□□□□ -0.52
HMGA2-209ENST00000539662 KCNT2Q6UVM3 1135 aa11.81□□□□□ -0.52
HMGA2-209ENST00000539662 ADGRD2Q7Z7M1 963 aa11.81□□□□□ -0.52
HMGA2-209ENST00000539662 ZBTB8OSQ8IWT0 167 aa11.81□□□□□ -0.52
HMGA2-209ENST00000539662 ABI1Q8IZP0 508 aa11.81□□□□□ -0.52
HMGA2-209ENST00000539662 GSTCDQ8NEC7 633 aa11.81□□□□□ -0.52
HMGA2-209ENST00000539662 LARP4BQ92615 738 aaKnown RBP11.81□□□□□ -0.52
HMGA2-209ENST00000539662 MRPL38Q96DV4 380 aaKnown RBP11.81□□□□□ -0.52
HMGA2-209ENST00000539662 ZBTB45Q96K62 511 aaPredicted RBP11.81□□□□□ -0.52
HMGA2-209ENST00000539662 FIZ1Q96SL8 496 aa11.81□□□□□ -0.52
HMGA2-209ENST00000539662 GAD1Q99259 594 aa11.81□□□□□ -0.52
HMGA2-209ENST00000539662 TARS2Q9BW92 718 aaKnown RBP11.81□□□□□ -0.52
HMGA2-209ENST00000539662 C2orf40Q9H1Z8 148 aa11.81□□□□□ -0.52
HMGA2-209ENST00000539662 IKZF4Q9H2S9 585 aa11.81□□□□□ -0.52
HMGA2-209ENST00000539662 RSAD1Q9HA92 442 aa11.81□□□□□ -0.52
HMGA2-209ENST00000539662 KMT5AQ9NQR1 393 aa11.81□□□□□ -0.52
HMGA2-209ENST00000539662 CACNG4Q9UBN1 327 aa11.81□□□□□ -0.52
HMGA2-209ENST00000539662 TRIP11Q15643 1979 aa11.81□□□□□ -0.52
HMGA2-209ENST00000539662 BRWD1Q9NSI6 2320 aa11.81□□□□□ -0.52
HMGA2-209ENST00000539662 TDRD15B5MCY1 1934 aaKnown RBP11.8□□□□□ -0.52
HMGA2-209ENST00000539662 F8W810 466 aa11.8□□□□□ -0.52
HMGA2-209ENST00000539662 K7ERI5 159 aa11.8□□□□□ -0.52
HMGA2-209ENST00000539662 MEFVO15553 781 aaPredicted RBP11.8□□□□□ -0.52
HMGA2-209ENST00000539662 HOXA2O43364 376 aa11.8□□□□□ -0.52
HMGA2-209ENST00000539662 SLC26A4O43511 780 aa11.8□□□□□ -0.52
HMGA2-209ENST00000539662 FGF18O76093 207 aa11.8□□□□□ -0.52
HMGA2-209ENST00000539662 MAPTP10636 758 aaKnown RBP11.8□□□□□ -0.52
HMGA2-209ENST00000539662 ITGA4P13612 1032 aa11.8□□□□□ -0.52
HMGA2-209ENST00000539662 PLS3P13797 630 aa11.8□□□□□ -0.52
HMGA2-209ENST00000539662 IGFBP6P24592 240 aaPredicted RBP11.8□□□□□ -0.52
HMGA2-209ENST00000539662 MLH1P40692 756 aa11.8□□□□□ -0.52
HMGA2-209ENST00000539662 SCNN1GP51170 649 aa11.8□□□□□ -0.52
HMGA2-209ENST00000539662 ERVFC1P60507 584 aa11.8□□□□□ -0.52
HMGA2-209ENST00000539662 PPP2R5AQ15172 486 aa11.8□□□□□ -0.52
HMGA2-209ENST00000539662 PCBP1Q15365 356 aaKnown RBP eCLIP11.8□□□□□ -0.522e-6■■■□□ 18.4
HMGA2-209ENST00000539662 MAPK6Q16659 721 aa11.8□□□□□ -0.52
HMGA2-209ENST00000539662 NOMO2Q5JPE7 1267 aa11.8□□□□□ -0.52
HMGA2-209ENST00000539662 RRAGBQ5VZM2 374 aa11.8□□□□□ -0.52
HMGA2-209ENST00000539662 SLC27A1Q6PCB7 646 aa11.8□□□□□ -0.52
HMGA2-209ENST00000539662 FAM43BQ6ZT52 329 aaPredicted RBP11.8□□□□□ -0.52
HMGA2-209ENST00000539662 DYMQ7RTS9 669 aa11.8□□□□□ -0.52
HMGA2-209ENST00000539662 LRRC43Q8N309 656 aa11.8□□□□□ -0.52
HMGA2-209ENST00000539662 CEP120Q8N960 986 aa11.8□□□□□ -0.52
HMGA2-209ENST00000539662 TMEM161BQ8NDZ6 487 aa11.8□□□□□ -0.52
HMGA2-209ENST00000539662 POF1BQ8WVV4 589 aa11.8□□□□□ -0.52
HMGA2-209ENST00000539662 RABGGTAQ92696 567 aa11.8□□□□□ -0.52
HMGA2-209ENST00000539662 PRIMPOLQ96LW4 560 aa11.8□□□□□ -0.52
HMGA2-209ENST00000539662 DRC1Q96MC2 740 aa11.8□□□□□ -0.52
HMGA2-209ENST00000539662 NTPCRQ9BSD7 190 aaKnown RBP11.8□□□□□ -0.52
HMGA2-209ENST00000539662 C11orf84Q9BUA3 381 aaPredicted RBP11.8□□□□□ -0.52
HMGA2-209ENST00000539662 PLVAPQ9BX97 442 aa11.8□□□□□ -0.52
HMGA2-209ENST00000539662 HAPLN2Q9GZV7 340 aa11.8□□□□□ -0.52
HMGA2-209ENST00000539662 GBP3Q9H0R5 595 aa11.8□□□□□ -0.52
HMGA2-209ENST00000539662 SNTG2Q9NY99 539 aa11.8□□□□□ -0.52
HMGA2-209ENST00000539662 RCOR1Q9UKL0 485 aa11.8□□□□□ -0.52
HMGA2-209ENST00000539662 ARL5CA6NH57 179 aa11.79□□□□□ -0.52
HMGA2-209ENST00000539662 ABLIM1O14639 778 aa11.79□□□□□ -0.52
HMGA2-209ENST00000539662 CUTAO60888 179 aa11.79□□□□□ -0.52
HMGA2-209ENST00000539662 ZC3H11AO75152 810 aaKnown RBP eCLIP11.79□□□□□ -0.52
HMGA2-209ENST00000539662 SKIP12755 728 aa11.79□□□□□ -0.52
HMGA2-209ENST00000539662 NMT1P30419 496 aaKnown RBP11.79□□□□□ -0.52
HMGA2-209ENST00000539662 SLC11A1P49279 550 aa11.79□□□□□ -0.52
HMGA2-209ENST00000539662 ZNF131P52739 623 aa11.79□□□□□ -0.52
HMGA2-209ENST00000539662 BCAR1P56945 870 aa11.79□□□□□ -0.52
HMGA2-209ENST00000539662 RBM10P98175 930 aaKnown RBP11.79□□□□□ -0.52
HMGA2-209ENST00000539662 DMP1Q13316 513 aaPredicted RBP11.79□□□□□ -0.52
HMGA2-209ENST00000539662 SKIV2LQ15477 1246 aaKnown RBP11.79□□□□□ -0.52
HMGA2-209ENST00000539662 E2F4Q16254 413 aa11.79□□□□□ -0.52
HMGA2-209ENST00000539662 SEZ6Q53EL9 994 aa11.79□□□□□ -0.52
HMGA2-209ENST00000539662 TCEAL5Q5H9L2 206 aa11.79□□□□□ -0.52
HMGA2-209ENST00000539662 ATF7IP2Q5U623 682 aa11.79□□□□□ -0.52
HMGA2-209ENST00000539662 GLB1LQ6UWU2 654 aa11.79□□□□□ -0.52
HMGA2-209ENST00000539662 ZBTB33Q86T24 672 aa11.79□□□□□ -0.52
HMGA2-209ENST00000539662 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.79□□□□□ -0.52
HMGA2-209ENST00000539662 THNSL1Q8IYQ7 743 aa11.79□□□□□ -0.52
HMGA2-209ENST00000539662 SLC39A11Q8N1S5 342 aa11.79□□□□□ -0.52
HMGA2-209ENST00000539662 TMEM130Q8N3G9 435 aa11.79□□□□□ -0.52
HMGA2-209ENST00000539662 KCTD17Q8N5Z5 321 aa11.79□□□□□ -0.52
HMGA2-209ENST00000539662 SLC17A8Q8NDX2 589 aa11.79□□□□□ -0.52
HMGA2-209ENST00000539662 SPIRE2Q8WWL2 714 aa11.79□□□□□ -0.52
HMGA2-209ENST00000539662 P2RX5Q93086 422 aa11.79□□□□□ -0.52
HMGA2-209ENST00000539662 DNAJC19Q96DA6 116 aa11.79□□□□□ -0.52
HMGA2-209ENST00000539662 PGBD4Q96DM1 585 aa11.79□□□□□ -0.52
HMGA2-209ENST00000539662 CCDC51Q96ER9 411 aa11.79□□□□□ -0.52
HMGA2-209ENST00000539662 ACO2Q99798 780 aaKnown RBP11.79□□□□□ -0.52
HMGA2-209ENST00000539662 VN1R3Q9BXE9 311 aa11.79□□□□□ -0.52
HMGA2-209ENST00000539662 FGFBP2Q9BYJ0 223 aa11.79□□□□□ -0.52
HMGA2-209ENST00000539662 ZHX3Q9H4I2 956 aa11.79□□□□□ -0.52
HMGA2-209ENST00000539662 TMEM134Q9H6X4 195 aa11.79□□□□□ -0.52
HMGA2-209ENST00000539662 PTPRHQ9HD43 1115 aa11.79□□□□□ -0.52
HMGA2-209ENST00000539662 LMCD1Q9NZU5 365 aa11.79□□□□□ -0.52
HMGA2-209ENST00000539662 CCDC39Q9UFE4 941 aa11.79□□□□□ -0.52
HMGA2-209ENST00000539662 PARP2Q9UGN5 583 aa11.79□□□□□ -0.52
HMGA2-209ENST00000539662 RWDD3Q9Y3V2 267 aa11.79□□□□□ -0.52
HMGA2-209ENST00000539662 PHLPP2Q6ZVD8 1323 aa11.79□□□□□ -0.52
HMGA2-209ENST00000539662 LINC01565O15544 149 aa11.78□□□□□ -0.52
HMGA2-209ENST00000539662 GALTP07902 379 aa11.78□□□□□ -0.52
HMGA2-209ENST00000539662 LAG3P18627 525 aa11.78□□□□□ -0.52
HMGA2-209ENST00000539662 CASP1P29466 404 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms