RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 RIPK3Q9Y572 518 aa15.17■□□□□ 0.02
UBE3B-210ENST00000539599 STK24Q9Y6E0 443 aa15.17■□□□□ 0.02
UBE3B-210ENST00000539599 PLSCR1O15162 318 aa15.17■□□□□ 0.02
UBE3B-210ENST00000539599 ATP2C2O75185 946 aa15.17■□□□□ 0.02
UBE3B-210ENST00000539599 PTENP60484 403 aa15.17■□□□□ 0.02
UBE3B-210ENST00000539599 SETQ01105 290 aaPredicted RBP15.17■□□□□ 0.02
UBE3B-210ENST00000539599 XXYLT1Q8NBI6 393 aa15.17■□□□□ 0.02
UBE3B-210ENST00000539599 GMLQ99445 158 aa15.17■□□□□ 0.02
UBE3B-210ENST00000539599 INTUQ9ULD6 942 aa15.17■□□□□ 0.02
UBE3B-210ENST00000539599 HMGB1P1B2RPK0 211 aaPredicted RBP15.16■□□□□ 0.02
UBE3B-210ENST00000539599 PEX10O60683 326 aa15.16■□□□□ 0.02
UBE3B-210ENST00000539599 ICAM1P05362 532 aa15.16■□□□□ 0.02
UBE3B-210ENST00000539599 PLS3P13797 630 aa15.16■□□□□ 0.02
UBE3B-210ENST00000539599 QARSP47897 775 aaKnown RBP15.16■□□□□ 0.02
UBE3B-210ENST00000539599 HSD17B4P51659 736 aa15.16■□□□□ 0.02
UBE3B-210ENST00000539599 EN1Q05925 392 aaPredicted RBP15.16■□□□□ 0.02
UBE3B-210ENST00000539599 IFT88Q13099 833 aa15.16■□□□□ 0.02
UBE3B-210ENST00000539599 RNF187Q5TA31 235 aaPredicted RBP15.16■□□□□ 0.02
UBE3B-210ENST00000539599 ZDHHC24Q6UX98 284 aa15.16■□□□□ 0.02
UBE3B-210ENST00000539599 STXBP4Q6ZWJ1 553 aa15.16■□□□□ 0.02
UBE3B-210ENST00000539599 CENPFP49454 3210 aa15.16■□□□□ 0.02
UBE3B-210ENST00000539599 PHF20L1A8MW92 1017 aa15.16■□□□□ 0.02
UBE3B-210ENST00000539599 WNT10BO00744 389 aa15.16■□□□□ 0.02
UBE3B-210ENST00000539599 RPL21P46778 160 aaKnown RBP15.16■□□□□ 0.02
UBE3B-210ENST00000539599 IFFO1Q0D2I5 559 aa15.16■□□□□ 0.02
UBE3B-210ENST00000539599 SNX1Q13596 522 aa15.16■□□□□ 0.02
UBE3B-210ENST00000539599 NFIL3Q16649 462 aa15.16■□□□□ 0.02
UBE3B-210ENST00000539599 RNF25Q96BH1 459 aaPredicted RBP15.16■□□□□ 0.02
UBE3B-210ENST00000539599 LRRC45Q96CN5 670 aa15.16■□□□□ 0.02
UBE3B-210ENST00000539599 ACCSQ96QU6 501 aa15.16■□□□□ 0.02
UBE3B-210ENST00000539599 SLITRK6Q9H5Y7 841 aa15.16■□□□□ 0.02
UBE3B-210ENST00000539599 ZDHHC18Q9NUE0 388 aa15.16■□□□□ 0.02
UBE3B-210ENST00000539599 SLC12A6Q9UHW9 1150 aa15.16■□□□□ 0.02
UBE3B-210ENST00000539599 FEM1BQ9UK73 627 aa15.16■□□□□ 0.02
UBE3B-210ENST00000539599 DAAM1Q9Y4D1 1078 aa15.16■□□□□ 0.02
UBE3B-210ENST00000539599 ADGRA3Q8IWK6 1321 aa15.16■□□□□ 0.02
UBE3B-210ENST00000539599 BCRP11274 1271 aa15.15■□□□□ 0.02
UBE3B-210ENST00000539599 WNT7BP56706 349 aa15.15■□□□□ 0.02
UBE3B-210ENST00000539599 FMO1Q01740 532 aa15.15■□□□□ 0.02
UBE3B-210ENST00000539599 TRIP13Q15645 432 aaPredicted RBP15.15■□□□□ 0.02
UBE3B-210ENST00000539599 SNRNP35Q16560 246 aaKnown RBP15.15■□□□□ 0.02
UBE3B-210ENST00000539599 CCDC38Q502W7 563 aa15.15■□□□□ 0.02
UBE3B-210ENST00000539599 INTS8Q75QN2 995 aaKnown RBP15.15■□□□□ 0.02
UBE3B-210ENST00000539599 CCDC25Q86WR0 208 aa15.15■□□□□ 0.02
UBE3B-210ENST00000539599 RIT2Q99578 217 aa15.15■□□□□ 0.02
UBE3B-210ENST00000539599 ERP44Q9BS26 406 aa15.15■□□□□ 0.02
UBE3B-210ENST00000539599 SEMA4AQ9H3S1 761 aa15.15■□□□□ 0.02
UBE3B-210ENST00000539599 NOCTQ9UK39 431 aaKnown RBP15.15■□□□□ 0.02
UBE3B-210ENST00000539599 TRPC6Q9Y210 931 aa15.15■□□□□ 0.02
UBE3B-210ENST00000539599 O00370 1275 aa15.15■□□□□ 0.02
UBE3B-210ENST00000539599 ERLIN2O94905 339 aa15.15■□□□□ 0.02
UBE3B-210ENST00000539599 RASA3Q14644 834 aa15.15■□□□□ 0.02
UBE3B-210ENST00000539599 DUPD1Q68J44 220 aa15.15■□□□□ 0.02
UBE3B-210ENST00000539599 SLC39A4Q6P5W5 647 aa15.15■□□□□ 0.02
UBE3B-210ENST00000539599 ANO5Q75V66 913 aa15.15■□□□□ 0.02
UBE3B-210ENST00000539599 EFCAB13Q8IY85 973 aa15.15■□□□□ 0.02
UBE3B-210ENST00000539599 NUP85Q9BW27 656 aa15.15■□□□□ 0.02
UBE3B-210ENST00000539599 MTFR1LQ9H019 292 aa15.15■□□□□ 0.02
UBE3B-210ENST00000539599 EHMT1Q9H9B1 1298 aa15.15■□□□□ 0.02
UBE3B-210ENST00000539599 CAPN7Q9Y6W3 813 aa15.15■□□□□ 0.02
UBE3B-210ENST00000539599 IFI35P80217 286 aaPredicted RBP15.14■□□□□ 0.01
UBE3B-210ENST00000539599 MTMR2Q13614 643 aa15.14■□□□□ 0.01
UBE3B-210ENST00000539599 PGM5Q15124 567 aa15.14■□□□□ 0.01
UBE3B-210ENST00000539599 C1orf54Q8WWF1 131 aa15.14■□□□□ 0.01
UBE3B-210ENST00000539599 ATG4AQ8WYN0 398 aa15.14■□□□□ 0.01
UBE3B-210ENST00000539599 ZNF653Q96CK0 615 aa15.14■□□□□ 0.01
UBE3B-210ENST00000539599 PWWP2AQ96N64 755 aa15.14■□□□□ 0.01
UBE3B-210ENST00000539599 ZSWIM1Q9BR11 485 aa15.14■□□□□ 0.01
UBE3B-210ENST00000539599 HERPUD2Q9BSE4 406 aa15.14■□□□□ 0.01
UBE3B-210ENST00000539599 TSPYL1Q9H0U9 437 aa15.14■□□□□ 0.01
UBE3B-210ENST00000539599 CARD9Q9H257 536 aa15.14■□□□□ 0.01
UBE3B-210ENST00000539599 DENND3A2RUS2 1198 aa15.14■□□□□ 0.01
UBE3B-210ENST00000539599 KIAA0391O15091 583 aaKnown RBP15.14■□□□□ 0.01
UBE3B-210ENST00000539599 CFHP08603 1231 aa15.14■□□□□ 0.01
UBE3B-210ENST00000539599 GPC5P78333 572 aa15.14■□□□□ 0.01
UBE3B-210ENST00000539599 SLC29A2Q14542 456 aa15.14■□□□□ 0.01
UBE3B-210ENST00000539599 PRUNE1Q86TP1 453 aa15.14■□□□□ 0.01
UBE3B-210ENST00000539599 SLC9A9Q8IVB4 645 aa15.14■□□□□ 0.01
UBE3B-210ENST00000539599 PPM1EQ8WY54 764 aa15.14■□□□□ 0.01
UBE3B-210ENST00000539599 RMDN3Q96TC7 470 aa15.14■□□□□ 0.01
UBE3B-210ENST00000539599 GRHL1Q9NZI5 618 aa15.14■□□□□ 0.01
UBE3B-210ENST00000539599 PFASO15067 1338 aa15.14■□□□□ 0.01
UBE3B-210ENST00000539599 A0A087WUV0 522 aaPredicted RBP15.13■□□□□ 0.01
UBE3B-210ENST00000539599 CLDN3O15551 220 aa15.13■□□□□ 0.01
UBE3B-210ENST00000539599 SPOPO43791 374 aa15.13■□□□□ 0.01
UBE3B-210ENST00000539599 PTGIRP43119 386 aa15.13■□□□□ 0.01
UBE3B-210ENST00000539599 NPTX2P47972 431 aa15.13■□□□□ 0.01
UBE3B-210ENST00000539599 SPOPLQ6IQ16 392 aa15.13■□□□□ 0.01
UBE3B-210ENST00000539599 FAM160B2Q86V87 743 aa15.13■□□□□ 0.01
UBE3B-210ENST00000539599 ZNF564Q8TBZ8 553 aaPredicted RBP15.13■□□□□ 0.01
UBE3B-210ENST00000539599 EPS8L3Q8TE67 593 aaKnown RBP15.13■□□□□ 0.01
UBE3B-210ENST00000539599 RAPGEF5Q92565 580 aa15.13■□□□□ 0.01
UBE3B-210ENST00000539599 CYFIP2Q96F07 1278 aa15.13■□□□□ 0.01
UBE3B-210ENST00000539599 UBIAD1Q9Y5Z9 338 aa15.13■□□□□ 0.01
UBE3B-210ENST00000539599 UBE4BO95155 1302 aa15.13■□□□□ 0.01
UBE3B-210ENST00000539599 DOCK5Q9H7D0 1870 aa15.13■□□□□ 0.01
UBE3B-210ENST00000539599 CLSTN1O94985 981 aa15.13■□□□□ 0.01
UBE3B-210ENST00000539599 GJB6O95452 261 aa15.13■□□□□ 0.01
UBE3B-210ENST00000539599 KRT5P13647 590 aa15.13■□□□□ 0.01
UBE3B-210ENST00000539599 ANXA13P27216 316 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms