RNA–Protein interactions for RNA: ENST00000539492.1

CD4-209, Transcript of CD4 molecule, humanhuman

TSL 4

Gene CD4, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-209ENST00000539492 NEK8Q86SG6 692 aa9.07□□□□□ -0.96
CD4-209ENST00000539492 FERMT3Q86UX7 667 aa9.07□□□□□ -0.96
CD4-209ENST00000539492 C4orf19Q8IY42 314 aa9.07□□□□□ -0.96
CD4-209ENST00000539492 CCDC105Q8IYK2 499 aa9.07□□□□□ -0.96
CD4-209ENST00000539492 CNNM3Q8NE01 707 aa9.07□□□□□ -0.96
CD4-209ENST00000539492 FLCNQ8NFG4 579 aa9.07□□□□□ -0.96
CD4-209ENST00000539492 TCP11Q8WWU5 503 aa9.07□□□□□ -0.96
CD4-209ENST00000539492 PRPF31Q8WWY3 499 aaKnown RBP9.07□□□□□ -0.96
CD4-209ENST00000539492 STAMQ92783 540 aa9.07□□□□□ -0.96
CD4-209ENST00000539492 NKD2Q969F2 451 aaPredicted RBP9.07□□□□□ -0.96
CD4-209ENST00000539492 TMEM143Q96AN5 459 aa9.07□□□□□ -0.96
CD4-209ENST00000539492 ZNF274Q96GC6 653 aaPredicted RBP9.07□□□□□ -0.96
CD4-209ENST00000539492 RPS6KC1Q96S38 1066 aa9.07□□□□□ -0.96
CD4-209ENST00000539492 RTP3Q9BQQ7 232 aa9.07□□□□□ -0.96
CD4-209ENST00000539492 LXNQ9BS40 222 aa9.07□□□□□ -0.96
CD4-209ENST00000539492 SLKQ9H2G2 1235 aaPredicted RBP9.07□□□□□ -0.96
CD4-209ENST00000539492 MINDY3Q9H8M7 445 aa9.07□□□□□ -0.96
CD4-209ENST00000539492 KCNK12Q9HB15 430 aa9.07□□□□□ -0.96
CD4-209ENST00000539492 ZSWIM6Q9HCJ5 1215 aa9.07□□□□□ -0.96
CD4-209ENST00000539492 MAN1C1Q9NR34 630 aa9.07□□□□□ -0.96
CD4-209ENST00000539492 MARCH5Q9NX47 278 aa9.07□□□□□ -0.96
CD4-209ENST00000539492 DPP7Q9UHL4 492 aa9.07□□□□□ -0.96
CD4-209ENST00000539492 FBXL21Q9UKT6 434 aa9.07□□□□□ -0.96
CD4-209ENST00000539492 PRG3Q9Y2Y8 225 aaPredicted RBP9.07□□□□□ -0.96
CD4-209ENST00000539492 CYP46A1Q9Y6A2 500 aa9.07□□□□□ -0.96
CD4-209ENST00000539492 NOTCH4Q99466 2003 aa9.07□□□□□ -0.96
CD4-209ENST00000539492 C2CD2LO14523 706 aa9.06□□□□□ -0.96
CD4-209ENST00000539492 TBX3O15119 743 aa9.06□□□□□ -0.96
CD4-209ENST00000539492 EPB41L2O43491 1005 aaKnown RBP9.06□□□□□ -0.96
CD4-209ENST00000539492 ERLIN2O94905 339 aa9.06□□□□□ -0.96
CD4-209ENST00000539492 ITGA4P13612 1032 aa9.06□□□□□ -0.96
CD4-209ENST00000539492 NPR3P17342 541 aa9.06□□□□□ -0.96
CD4-209ENST00000539492 AXLP30530 894 aa9.06□□□□□ -0.96
CD4-209ENST00000539492 YWHABP31946 246 aaKnown RBP9.06□□□□□ -0.96
CD4-209ENST00000539492 GLUD2P49448 558 aa9.06□□□□□ -0.96
CD4-209ENST00000539492 AFF1P51825 1210 aaKnown RBP9.06□□□□□ -0.96
CD4-209ENST00000539492 AK2P54819 239 aa9.06□□□□□ -0.96
CD4-209ENST00000539492 DSC1Q08554 894 aa9.06□□□□□ -0.96
CD4-209ENST00000539492 EPHA7Q15375 998 aa9.06□□□□□ -0.96
CD4-209ENST00000539492 NOTUMQ6P988 496 aa9.06□□□□□ -0.96
CD4-209ENST00000539492 OTUD6AQ7L8S5 288 aa9.06□□□□□ -0.96
CD4-209ENST00000539492 COLGALT2Q8IYK4 626 aa9.06□□□□□ -0.96
CD4-209ENST00000539492 RNF168Q8IYW5 571 aaPredicted RBP9.06□□□□□ -0.96
CD4-209ENST00000539492 SIX5Q8N196 739 aa9.06□□□□□ -0.96
CD4-209ENST00000539492 ZNF579Q8NAF0 562 aaKnown RBP9.06□□□□□ -0.96
CD4-209ENST00000539492 RNF149Q8NC42 400 aa9.06□□□□□ -0.96
CD4-209ENST00000539492 SMG8Q8ND04 991 aaKnown RBP9.06□□□□□ -0.96
CD4-209ENST00000539492 AIFM3Q96NN9 605 aa9.06□□□□□ -0.96
CD4-209ENST00000539492 MTRQ99707 1265 aa9.06□□□□□ -0.96
CD4-209ENST00000539492 NAP1L4Q99733 375 aaKnown RBP9.06□□□□□ -0.96
CD4-209ENST00000539492 RXFP1Q9HBX9 757 aa9.06□□□□□ -0.96
CD4-209ENST00000539492 WDR6Q9NNW5 1121 aaKnown RBP9.06□□□□□ -0.96
CD4-209ENST00000539492 BMP2KQ9NSY1 1161 aaPredicted RBP9.06□□□□□ -0.96
CD4-209ENST00000539492 WRAP73Q9P2S5 460 aaPredicted RBP9.06□□□□□ -0.96
CD4-209ENST00000539492 KCNJ14Q9UNX9 436 aa9.06□□□□□ -0.96
CD4-209ENST00000539492 IPPQ9Y573 584 aa9.06□□□□□ -0.96
CD4-209ENST00000539492 CLUHO75153 1309 aa9.05□□□□□ -0.96
CD4-209ENST00000539492 DMXL1Q9Y485 3027 aa9.05□□□□□ -0.96
CD4-209ENST00000539492 CNOT1A5YKK6 2376 aaKnown RBP9.05□□□□□ -0.96
CD4-209ENST00000539492 MYH11P35749 1972 aa9.05□□□□□ -0.96
CD4-209ENST00000539492 ZMYM2Q9UBW7 1377 aa9.05□□□□□ -0.96
CD4-209ENST00000539492 ARL5CA6NH57 179 aa9.05□□□□□ -0.96
CD4-209ENST00000539492 TEX28O15482 410 aa9.05□□□□□ -0.96
CD4-209ENST00000539492 MARCH6O60337 910 aa9.05□□□□□ -0.96
CD4-209ENST00000539492 CCNT1O60563 726 aaKnown RBP9.05□□□□□ -0.96
CD4-209ENST00000539492 TSPAN1O60635 241 aa9.05□□□□□ -0.96
CD4-209ENST00000539492 N4BP1O75113 896 aaKnown RBP9.05□□□□□ -0.96
CD4-209ENST00000539492 NR1I2O75469 434 aa9.05□□□□□ -0.96
CD4-209ENST00000539492 CDKL5O76039 1030 aa9.05□□□□□ -0.96
CD4-209ENST00000539492 PAPLNO95428 1278 aa9.05□□□□□ -0.96
CD4-209ENST00000539492 EFEMP2O95967 443 aa9.05□□□□□ -0.96
CD4-209ENST00000539492 C1RP00736 705 aa9.05□□□□□ -0.96
CD4-209ENST00000539492 XBP1P17861 261 aa9.05□□□□□ -0.96
CD4-209ENST00000539492 GBP2P32456 591 aaPredicted RBP9.05□□□□□ -0.96
CD4-209ENST00000539492 OR1G1P47890 313 aa9.05□□□□□ -0.96
CD4-209ENST00000539492 PTENP60484 403 aa9.05□□□□□ -0.96
CD4-209ENST00000539492 DSG1Q02413 1049 aa9.05□□□□□ -0.96
CD4-209ENST00000539492 MXD4Q14582 209 aaPredicted RBP9.05□□□□□ -0.96
CD4-209ENST00000539492 XKR9Q5GH70 373 aa9.05□□□□□ -0.96
CD4-209ENST00000539492 KIAA0319Q5VV43 1072 aa9.05□□□□□ -0.96
CD4-209ENST00000539492 NCAPH2Q6IBW4 605 aa9.05□□□□□ -0.96
CD4-209ENST00000539492 IFNLR1Q8IU57 520 aaPredicted RBP9.05□□□□□ -0.96
CD4-209ENST00000539492 GPR65Q8IYL9 337 aa9.05□□□□□ -0.96
CD4-209ENST00000539492 HACE1Q8IYU2 909 aa9.05□□□□□ -0.96
CD4-209ENST00000539492 DTWD2Q8NBA8 298 aa9.05□□□□□ -0.96
CD4-209ENST00000539492 HDAC7Q8WUI4 952 aa9.05□□□□□ -0.96
CD4-209ENST00000539492 HAS1Q92839 578 aa9.05□□□□□ -0.96
CD4-209ENST00000539492 NXPE3Q969Y0 559 aa9.05□□□□□ -0.96
CD4-209ENST00000539492 GAD1Q99259 594 aa9.05□□□□□ -0.96
CD4-209ENST00000539492 PHF20Q9BVI0 1012 aa9.05□□□□□ -0.96
CD4-209ENST00000539492 EIF2AQ9BY44 585 aaKnown RBP9.05□□□□□ -0.96
CD4-209ENST00000539492 TM6SF1Q9BZW5 370 aa9.05□□□□□ -0.96
CD4-209ENST00000539492 ZSWIM4Q9H7M6 989 aa9.05□□□□□ -0.96
CD4-209ENST00000539492 EPS15L1Q9UBC2 864 aa9.05□□□□□ -0.96
CD4-209ENST00000539492 WNT16Q9UBV4 365 aa9.05□□□□□ -0.96
CD4-209ENST00000539492 NCOR2Q9Y618 2525 aa9.05□□□□□ -0.96
CD4-209ENST00000539492 STK36Q9NRP7 1315 aa9.05□□□□□ -0.96
CD4-209ENST00000539492 RALGAPA1Q6GYQ0 2036 aa9.04□□□□□ -0.96
CD4-209ENST00000539492 PATJQ8NI35 1801 aa9.04□□□□□ -0.96
CD4-209ENST00000539492 CCDC195A0A1B0GUA6 201 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms