RNA–Protein interactions for RNA: ENST00000539442.1

LEMD3-202, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 932 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-202ENST00000539442 STYXL1Q9Y6J8 313 aa11.66□□□□□ -0.54
LEMD3-202ENST00000539442 PCNTO95613 3336 aa11.65□□□□□ -0.54
LEMD3-202ENST00000539442 HTTP42858 3142 aa11.65□□□□□ -0.54
LEMD3-202ENST00000539442 INO80B-WBP1J3KQ70 363 aa11.65□□□□□ -0.54
LEMD3-202ENST00000539442 M0QZ92 97 aa11.65□□□□□ -0.54
LEMD3-202ENST00000539442 MAPK13O15264 365 aa11.65□□□□□ -0.54
LEMD3-202ENST00000539442 CAND2O75155 1236 aa11.65□□□□□ -0.54
LEMD3-202ENST00000539442 GPR32O75388 356 aa11.65□□□□□ -0.54
LEMD3-202ENST00000539442 SGPL1O95470 568 aa11.65□□□□□ -0.54
LEMD3-202ENST00000539442 TPM3P06753 285 aa11.65□□□□□ -0.54
LEMD3-202ENST00000539442 TPM2P07951 284 aa11.65□□□□□ -0.54
LEMD3-202ENST00000539442 EPB41P11171 864 aaKnown RBP11.65□□□□□ -0.54
LEMD3-202ENST00000539442 PTK7Q13308 1070 aa11.65□□□□□ -0.54
LEMD3-202ENST00000539442 PTGISQ16647 500 aa11.65□□□□□ -0.54
LEMD3-202ENST00000539442 HSP90AA4PQ58FG1 418 aa11.65□□□□□ -0.54
LEMD3-202ENST00000539442 PPP1R13LQ8WUF5 828 aa11.65□□□□□ -0.54
LEMD3-202ENST00000539442 MRFAP1L1Q96HT8 127 aa11.65□□□□□ -0.54
LEMD3-202ENST00000539442 TRIM5Q9C035 493 aa11.65□□□□□ -0.54
LEMD3-202ENST00000539442 METTL14Q9HCE5 456 aaKnown RBP11.65□□□□□ -0.54
LEMD3-202ENST00000539442 FRMD4BQ9Y2L6 1034 aa11.65□□□□□ -0.54
LEMD3-202ENST00000539442 KAT6AQ92794 2004 aa11.65□□□□□ -0.54
LEMD3-202ENST00000539442 CNTNAP2Q9UHC6 1331 aa11.64□□□□□ -0.55
LEMD3-202ENST00000539442 CEP350Q5VT06 3117 aa11.64□□□□□ -0.55
LEMD3-202ENST00000539442 ANKRD63C9JTQ0 380 aa11.64□□□□□ -0.55
LEMD3-202ENST00000539442 ARVCFO00192 962 aa11.64□□□□□ -0.55
LEMD3-202ENST00000539442 CLIC2O15247 247 aa11.64□□□□□ -0.55
LEMD3-202ENST00000539442 AP5Z1O43299 807 aa11.64□□□□□ -0.55
LEMD3-202ENST00000539442 EXOC3O60645 756 aa11.64□□□□□ -0.55
LEMD3-202ENST00000539442 TOM1L1O75674 476 aa11.64□□□□□ -0.55
LEMD3-202ENST00000539442 AKAP3O75969 853 aa11.64□□□□□ -0.55
LEMD3-202ENST00000539442 ADCY5O95622 1261 aa11.64□□□□□ -0.55
LEMD3-202ENST00000539442 MYCP01106 439 aaPredicted RBP11.64□□□□□ -0.55
LEMD3-202ENST00000539442 PRKCSHP14314 528 aaPredicted RBP11.64□□□□□ -0.55
LEMD3-202ENST00000539442 DARSP14868 501 aaKnown RBP11.64□□□□□ -0.55
LEMD3-202ENST00000539442 PSMC2P35998 433 aaKnown RBP11.64□□□□□ -0.55
LEMD3-202ENST00000539442 MTIF2P46199 727 aaKnown RBP11.64□□□□□ -0.55
LEMD3-202ENST00000539442 ZNF75DP51815 510 aa11.64□□□□□ -0.55
LEMD3-202ENST00000539442 CRYBB1P53674 252 aaPredicted RBP11.64□□□□□ -0.55
LEMD3-202ENST00000539442 UBASH3AP57075 661 aa11.64□□□□□ -0.55
LEMD3-202ENST00000539442 PPP2R3AQ06190 1150 aa11.64□□□□□ -0.55
LEMD3-202ENST00000539442 PRPF4BQ13523 1007 aaKnown RBP11.64□□□□□ -0.55
LEMD3-202ENST00000539442 KRT31Q15323 416 aa11.64□□□□□ -0.55
LEMD3-202ENST00000539442 KIZQ2M2Z5 673 aa11.64□□□□□ -0.55
LEMD3-202ENST00000539442 CCDC40Q4G0X9 1142 aa11.64□□□□□ -0.55
LEMD3-202ENST00000539442 FILIP1LQ4L180 1135 aa11.64□□□□□ -0.55
LEMD3-202ENST00000539442 SLC39A4Q6P5W5 647 aa11.64□□□□□ -0.55
LEMD3-202ENST00000539442 APTXQ7Z2E3 356 aaKnown RBP11.64□□□□□ -0.55
LEMD3-202ENST00000539442 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.64□□□□□ -0.55
LEMD3-202ENST00000539442 FRMD5Q7Z6J6 570 aa11.64□□□□□ -0.55
LEMD3-202ENST00000539442 ANKLE1Q8NAG6 615 aa11.64□□□□□ -0.55
LEMD3-202ENST00000539442 XXYLT1Q8NBI6 393 aa11.64□□□□□ -0.55
LEMD3-202ENST00000539442 U2AF1L4Q8WU68 220 aaKnown RBP11.64□□□□□ -0.55
LEMD3-202ENST00000539442 ACO2Q99798 780 aaKnown RBP11.64□□□□□ -0.55
LEMD3-202ENST00000539442 CBWD1Q9BRT8 395 aa11.64□□□□□ -0.55
LEMD3-202ENST00000539442 TUBGCP2Q9BSJ2 902 aa11.64□□□□□ -0.55
LEMD3-202ENST00000539442 TARS2Q9BW92 718 aaKnown RBP11.64□□□□□ -0.55
LEMD3-202ENST00000539442 IKZF4Q9H2S9 585 aa11.64□□□□□ -0.55
LEMD3-202ENST00000539442 MINDY3Q9H8M7 445 aa11.64□□□□□ -0.55
LEMD3-202ENST00000539442 KIAA1586Q9HCI6 787 aa11.64□□□□□ -0.55
LEMD3-202ENST00000539442 HSPBP1Q9NZL4 362 aa11.64□□□□□ -0.55
LEMD3-202ENST00000539442 IFNKQ9P0W0 207 aa11.64□□□□□ -0.55
LEMD3-202ENST00000539442 NOD1Q9Y239 953 aa11.64□□□□□ -0.55
LEMD3-202ENST00000539442 TNFSF13BQ9Y275 285 aa11.64□□□□□ -0.55
LEMD3-202ENST00000539442 TRPV2Q9Y5S1 764 aa11.64□□□□□ -0.55
LEMD3-202ENST00000539442 A0A1B0GTH6 734 aa11.63□□□□□ -0.55
LEMD3-202ENST00000539442 ERLIN2O94905 339 aa11.63□□□□□ -0.55
LEMD3-202ENST00000539442 LDHAP00338 332 aaKnown RBP11.63□□□□□ -0.55
LEMD3-202ENST00000539442 EDN1P05305 212 aa11.63□□□□□ -0.55
LEMD3-202ENST00000539442 SFPQP23246 707 aaKnown RBP eCLIP11.63□□□□□ -0.55
LEMD3-202ENST00000539442 EIF4BP23588 611 aaKnown RBP11.63□□□□□ -0.55
LEMD3-202ENST00000539442 CDC25BP30305 580 aa11.63□□□□□ -0.55
LEMD3-202ENST00000539442 ADSSP30520 456 aa11.63□□□□□ -0.55
LEMD3-202ENST00000539442 GJA8P48165 433 aa11.63□□□□□ -0.55
LEMD3-202ENST00000539442 CDK7P50613 346 aa11.63□□□□□ -0.55
LEMD3-202ENST00000539442 CYP2J2P51589 502 aa11.63□□□□□ -0.55
LEMD3-202ENST00000539442 COPB1P53618 953 aaKnown RBP11.63□□□□□ -0.55
LEMD3-202ENST00000539442 MRPS6P82932 125 aaKnown RBP11.63□□□□□ -0.55
LEMD3-202ENST00000539442 ENPEPQ07075 957 aa11.63□□□□□ -0.55
LEMD3-202ENST00000539442 NCBP1Q09161 790 aaKnown RBP11.63□□□□□ -0.55
LEMD3-202ENST00000539442 AMHR2Q16671 573 aa11.63□□□□□ -0.55
LEMD3-202ENST00000539442 MAN2A1Q16706 1144 aa11.63□□□□□ -0.55
LEMD3-202ENST00000539442 ATF7IP2Q5U623 682 aa11.63□□□□□ -0.55
LEMD3-202ENST00000539442 CEP135Q66GS9 1140 aa11.63□□□□□ -0.55
LEMD3-202ENST00000539442 TSHZ1Q6ZSZ6 1077 aa11.63□□□□□ -0.55
LEMD3-202ENST00000539442 TRIM59Q8IWR1 403 aa11.63□□□□□ -0.55
LEMD3-202ENST00000539442 FAM186BQ8IYM0 893 aa11.63□□□□□ -0.55
LEMD3-202ENST00000539442 POMGNT1Q8WZA1 660 aa11.63□□□□□ -0.55
LEMD3-202ENST00000539442 EEF2KMTQ96G04 330 aa11.63□□□□□ -0.55
LEMD3-202ENST00000539442 ZNF668Q96K58 619 aaPredicted RBP11.63□□□□□ -0.55
LEMD3-202ENST00000539442 FBXL18Q96ME1 805 aa11.63□□□□□ -0.55
LEMD3-202ENST00000539442 PPP1R16BQ96T49 567 aa11.63□□□□□ -0.55
LEMD3-202ENST00000539442 OSMRQ99650 979 aa11.63□□□□□ -0.55
LEMD3-202ENST00000539442 CELF4Q9BZC1 486 aaKnown RBP11.63□□□□□ -0.55
LEMD3-202ENST00000539442 XPO4Q9C0E2 1151 aaKnown RBP11.63□□□□□ -0.55
LEMD3-202ENST00000539442 HCSTQ9UBK5 93 aa11.63□□□□□ -0.55
LEMD3-202ENST00000539442 ARMCX3Q9UH62 379 aaPredicted RBP11.63□□□□□ -0.55
LEMD3-202ENST00000539442 MROH7Q68CQ1 1323 aa11.62□□□□□ -0.55
LEMD3-202ENST00000539442 EVPLQ92817 2033 aa11.62□□□□□ -0.55
LEMD3-202ENST00000539442 A0A0B4J269 797 aa11.62□□□□□ -0.55
LEMD3-202ENST00000539442 LGALS16A8MUM7 142 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms