RNA–Protein interactions for RNA: ENST00000539413.1

CIT-210, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-210ENST00000539413 PEX3P56589 373 aa17.29■□□□□ 0.36
CIT-210ENST00000539413 KRT17Q04695 432 aa17.29■□□□□ 0.36
CIT-210ENST00000539413 RAD51AP2Q09MP3 1159 aa17.29■□□□□ 0.36
CIT-210ENST00000539413 PRPF4BQ13523 1007 aaKnown RBP17.29■□□□□ 0.36
CIT-210ENST00000539413 CTC1Q2NKJ3 1217 aa17.29■□□□□ 0.36
CIT-210ENST00000539413 LEXMQ3ZCV2 418 aa17.29■□□□□ 0.36
CIT-210ENST00000539413 RBM23Q86U06 439 aaKnown RBP17.29■□□□□ 0.36
CIT-210ENST00000539413 KCTD17Q8N5Z5 321 aa17.29■□□□□ 0.36
CIT-210ENST00000539413 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.29■□□□□ 0.36
CIT-210ENST00000539413 LRRC15Q8TF66 581 aa17.29■□□□□ 0.36
CIT-210ENST00000539413 NECAB3Q96P71 396 aaPredicted RBP17.29■□□□□ 0.36
CIT-210ENST00000539413 GAD1Q99259 594 aa17.29■□□□□ 0.36
CIT-210ENST00000539413 PDZD7Q9H5P4 517 aa17.29■□□□□ 0.36
CIT-210ENST00000539413 UBN1Q9NPG3 1134 aa17.29■□□□□ 0.36
CIT-210ENST00000539413 PUF60Q9UHX1 559 aaKnown RBP17.29■□□□□ 0.36
CIT-210ENST00000539413 SPTBN5Q9NRC6 3674 aaKnown RBP17.28■□□□□ 0.36
CIT-210ENST00000539413 ARL5CA6NH57 179 aa17.28■□□□□ 0.36
CIT-210ENST00000539413 CCDC169A6NNP5 214 aa17.28■□□□□ 0.36
CIT-210ENST00000539413 SFI1A8K8P3 1242 aa17.28■□□□□ 0.36
CIT-210ENST00000539413 ACKR2O00590 384 aa17.28■□□□□ 0.36
CIT-210ENST00000539413 SLC26A4O43511 780 aa17.28■□□□□ 0.36
CIT-210ENST00000539413 NCK2O43639 380 aa17.28■□□□□ 0.36
CIT-210ENST00000539413 GALTP07902 379 aa17.28■□□□□ 0.36
CIT-210ENST00000539413 PLA2G4BP0C869 781 aa17.28■□□□□ 0.36
CIT-210ENST00000539413 AKAP5P24588 427 aa17.28■□□□□ 0.36
CIT-210ENST00000539413 GUCY2CP25092 1073 aa17.28■□□□□ 0.36
CIT-210ENST00000539413 MARCKSP29966 332 aaPredicted RBP17.28■□□□□ 0.36
CIT-210ENST00000539413 NPTX2P47972 431 aa17.28■□□□□ 0.36
CIT-210ENST00000539413 NRIP1P48552 1158 aa17.28■□□□□ 0.36
CIT-210ENST00000539413 SLC11A1P49279 550 aa17.28■□□□□ 0.36
CIT-210ENST00000539413 EFNA5P52803 228 aa17.28■□□□□ 0.36
CIT-210ENST00000539413 SLC12A3P55017 1021 aa17.28■□□□□ 0.36
CIT-210ENST00000539413 CEBPZQ03701 1054 aaKnown RBP17.28■□□□□ 0.36
CIT-210ENST00000539413 DLX2Q07687 328 aaPredicted RBP17.28■□□□□ 0.36
CIT-210ENST00000539413 KARSQ15046 597 aaKnown RBP17.28■□□□□ 0.36
CIT-210ENST00000539413 TMEM132AQ24JP5 1023 aa17.28■□□□□ 0.36
CIT-210ENST00000539413 PLPP4Q5VZY2 271 aa17.28■□□□□ 0.36
CIT-210ENST00000539413 HACE1Q8IYU2 909 aa17.28■□□□□ 0.36
CIT-210ENST00000539413 BCL7CQ8WUZ0 217 aaPredicted RBP17.28■□□□□ 0.36
CIT-210ENST00000539413 PPP2R3CQ969Q6 453 aa17.28■□□□□ 0.36
CIT-210ENST00000539413 CALML4Q96GE6 196 aa17.28■□□□□ 0.36
CIT-210ENST00000539413 DRC1Q96MC2 740 aa17.28■□□□□ 0.36
CIT-210ENST00000539413 ZFP42Q96MM3 310 aa17.28■□□□□ 0.36
CIT-210ENST00000539413 USP28Q96RU2 1077 aa17.28■□□□□ 0.36
CIT-210ENST00000539413 UHRF1Q96T88 793 aaPredicted RBP17.28■□□□□ 0.36
CIT-210ENST00000539413 TCF25Q9BQ70 676 aa17.28■□□□□ 0.36
CIT-210ENST00000539413 ZSCAN16Q9H4T2 348 aaPredicted RBP17.28■□□□□ 0.36
CIT-210ENST00000539413 TLE6Q9H808 572 aa17.28■□□□□ 0.36
CIT-210ENST00000539413 ENTPD7Q9NQZ7 604 aa17.28■□□□□ 0.36
CIT-210ENST00000539413 MIOSQ9NXC5 875 aa17.28■□□□□ 0.36
CIT-210ENST00000539413 KANSL3Q9P2N6 904 aa17.28■□□□□ 0.36
CIT-210ENST00000539413 FBXO2Q9UK22 296 aaPredicted RBP17.28■□□□□ 0.36
CIT-210ENST00000539413 VCANP13611 3396 aa17.27■□□□□ 0.36
CIT-210ENST00000539413 N4BP3O15049 544 aa17.27■□□□□ 0.36
CIT-210ENST00000539413 PER2O15055 1255 aa17.27■□□□□ 0.36
CIT-210ENST00000539413 INPPL1O15357 1258 aa17.27■□□□□ 0.36
CIT-210ENST00000539413 TBX10O75333 385 aa17.27■□□□□ 0.36
CIT-210ENST00000539413 SCNN1GP51170 649 aa17.27■□□□□ 0.36
CIT-210ENST00000539413 ADAM15Q13444 863 aa17.27■□□□□ 0.36
CIT-210ENST00000539413 SPECC1Q5M775 1068 aa17.27■□□□□ 0.36
CIT-210ENST00000539413 NT5DC1Q5TFE4 455 aa17.27■□□□□ 0.36
CIT-210ENST00000539413 EEF1DP3Q658K8 133 aa17.27■□□□□ 0.36
CIT-210ENST00000539413 PDE12Q6L8Q7 609 aaKnown RBP17.27■□□□□ 0.36
CIT-210ENST00000539413 TMEM169Q96HH4 297 aa17.27■□□□□ 0.36
CIT-210ENST00000539413 IGSF21Q96ID5 467 aa17.27■□□□□ 0.36
CIT-210ENST00000539413 FAM193BQ96PV7 902 aaPredicted RBP17.27■□□□□ 0.36
CIT-210ENST00000539413 TIPINQ9BVW5 301 aa17.27■□□□□ 0.36
CIT-210ENST00000539413 KMT5AQ9NQR1 393 aa17.27■□□□□ 0.36
CIT-210ENST00000539413 BLOC1S4Q9NUP1 217 aa17.27■□□□□ 0.36
CIT-210ENST00000539413 KLK14Q9P0G3 267 aa17.27■□□□□ 0.36
CIT-210ENST00000539413 GIT1Q9Y2X7 761 aa17.27■□□□□ 0.36
CIT-210ENST00000539413 PHLPP2Q6ZVD8 1323 aa17.26■□□□□ 0.35
CIT-210ENST00000539413 NPHP3-ACAD11A0A0J9YXS1 232 aa17.26■□□□□ 0.35
CIT-210ENST00000539413 HIDE1A8MVS5 230 aa17.26■□□□□ 0.35
CIT-210ENST00000539413 K7ERI5 159 aa17.26■□□□□ 0.35
CIT-210ENST00000539413 HSP90AA1P07900 732 aaKnown RBP17.26■□□□□ 0.35
CIT-210ENST00000539413 PLCG1P19174 1290 aa17.26■□□□□ 0.35
CIT-210ENST00000539413 CACNB1Q02641 598 aaPredicted RBP17.26■□□□□ 0.35
CIT-210ENST00000539413 DMP1Q13316 513 aaPredicted RBP17.26■□□□□ 0.35
CIT-210ENST00000539413 DHX8Q14562 1220 aaKnown RBP17.26■□□□□ 0.35
CIT-210ENST00000539413 ARSHQ5FYA8 562 aa17.26■□□□□ 0.35
CIT-210ENST00000539413 USP49Q70CQ1 688 aa17.26■□□□□ 0.35
CIT-210ENST00000539413 TMC7Q7Z402 723 aa17.26■□□□□ 0.35
CIT-210ENST00000539413 EFHBQ8N7U6 833 aa17.26■□□□□ 0.35
CIT-210ENST00000539413 GSTCDQ8NEC7 633 aa17.26■□□□□ 0.35
CIT-210ENST00000539413 RASSF8Q8NHQ8 419 aa17.26■□□□□ 0.35
CIT-210ENST00000539413 EPSTI1Q96J88 318 aa17.26■□□□□ 0.35
CIT-210ENST00000539413 ARHGAP28Q9P2N2 729 aa17.26■□□□□ 0.35
CIT-210ENST00000539413 PARP2Q9UGN5 583 aa17.26■□□□□ 0.35
CIT-210ENST00000539413 NRP1O14786 923 aa17.25■□□□□ 0.35
CIT-210ENST00000539413 SLC16A4O15374 487 aa17.25■□□□□ 0.35
CIT-210ENST00000539413 GLP2RO95838 553 aa17.25■□□□□ 0.35
CIT-210ENST00000539413 ALDH2P05091 517 aa17.25■□□□□ 0.35
CIT-210ENST00000539413 IL9P15248 144 aa17.25■□□□□ 0.35
CIT-210ENST00000539413 RBM10P98175 930 aaKnown RBP17.25■□□□□ 0.35
CIT-210ENST00000539413 CLUL1Q15846 466 aa17.25■□□□□ 0.35
CIT-210ENST00000539413 DUSP6Q16828 381 aa17.25■□□□□ 0.35
CIT-210ENST00000539413 ATF7IP2Q5U623 682 aa17.25■□□□□ 0.35
CIT-210ENST00000539413 PTCRAQ6ISU1 281 aaPredicted RBP17.25■□□□□ 0.35
CIT-210ENST00000539413 TAS1R3Q7RTX0 852 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms