RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 LRWD1Q9UFC0 647 aa21.13■□□□□ 0.97
TNFRSF1A-212ENST00000539372 KIF3AQ9Y496 699 aa21.13■□□□□ 0.97
TNFRSF1A-212ENST00000539372 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.12■□□□□ 0.97
TNFRSF1A-212ENST00000539372 ARL5CA6NH57 179 aa21.12■□□□□ 0.97
TNFRSF1A-212ENST00000539372 CLASP2O75122 1294 aaKnown RBP21.12■□□□□ 0.97
TNFRSF1A-212ENST00000539372 MLH1P40692 756 aa21.12■□□□□ 0.97
TNFRSF1A-212ENST00000539372 VN1R3Q9BXE9 311 aa21.12■□□□□ 0.97
TNFRSF1A-212ENST00000539372 NXF3Q9H4D5 531 aaKnown RBP21.12■□□□□ 0.97
TNFRSF1A-212ENST00000539372 POLD4Q9HCU8 107 aa21.12■□□□□ 0.97
TNFRSF1A-212ENST00000539372 UBN1Q9NPG3 1134 aa21.12■□□□□ 0.97
TNFRSF1A-212ENST00000539372 CARNS1A5YM72 827 aa21.11■□□□□ 0.97
TNFRSF1A-212ENST00000539372 DCXO43602 365 aa21.11■□□□□ 0.97
TNFRSF1A-212ENST00000539372 NPTXRO95502 500 aa21.11■□□□□ 0.97
TNFRSF1A-212ENST00000539372 ALADP13716 330 aa21.11■□□□□ 0.97
TNFRSF1A-212ENST00000539372 CYP11B2P19099 503 aa21.11■□□□□ 0.97
TNFRSF1A-212ENST00000539372 GJB2P29033 226 aa21.11■□□□□ 0.97
TNFRSF1A-212ENST00000539372 CDCA2Q69YH5 1023 aaPredicted RBP21.11■□□□□ 0.97
TNFRSF1A-212ENST00000539372 SYCE2Q6PIF2 218 aa21.11■□□□□ 0.97
TNFRSF1A-212ENST00000539372 TMEM87AQ8NBN3 555 aa21.11■□□□□ 0.97
TNFRSF1A-212ENST00000539372 ZFP42Q96MM3 310 aa21.11■□□□□ 0.97
TNFRSF1A-212ENST00000539372 TMEM175Q9BSA9 504 aa21.11■□□□□ 0.97
TNFRSF1A-212ENST00000539372 S1PR5Q9H228 398 aa21.11■□□□□ 0.97
TNFRSF1A-212ENST00000539372 BHMT2Q9H2M3 363 aa21.11■□□□□ 0.97
TNFRSF1A-212ENST00000539372 MIOSQ9NXC5 875 aa21.11■□□□□ 0.97
TNFRSF1A-212ENST00000539372 KIAA1024Q9UPX6 916 aa21.11■□□□□ 0.97
TNFRSF1A-212ENST00000539372 FAN1Q9Y2M0 1017 aa21.11■□□□□ 0.97
TNFRSF1A-212ENST00000539372 HCFC2Q9Y5Z7 792 aa21.11■□□□□ 0.97
TNFRSF1A-212ENST00000539372 PP2D1A8MPX8 630 aa21.1■□□□□ 0.97
TNFRSF1A-212ENST00000539372 GPR37L1O60883 481 aa21.1■□□□□ 0.97
TNFRSF1A-212ENST00000539372 ALDH2P05091 517 aa21.1■□□□□ 0.97
TNFRSF1A-212ENST00000539372 SSBP05455 408 aaKnown RBP eCLIP21.1■□□□□ 0.97
TNFRSF1A-212ENST00000539372 CTSAP10619 480 aa21.1■□□□□ 0.97
TNFRSF1A-212ENST00000539372 LIG1P18858 919 aa21.1■□□□□ 0.97
TNFRSF1A-212ENST00000539372 AKAP5P24588 427 aa21.1■□□□□ 0.97
TNFRSF1A-212ENST00000539372 SCNN1GP51170 649 aa21.1■□□□□ 0.97
TNFRSF1A-212ENST00000539372 IL17AQ16552 155 aa21.1■□□□□ 0.97
TNFRSF1A-212ENST00000539372 ZBTB8OSQ8IWT0 167 aa21.1■□□□□ 0.97
TNFRSF1A-212ENST00000539372 SNX29Q8TEQ0 813 aa21.1■□□□□ 0.97
TNFRSF1A-212ENST00000539372 SUSD6Q92537 303 aa21.1■□□□□ 0.97
TNFRSF1A-212ENST00000539372 CASP10Q92851 521 aa21.1■□□□□ 0.97
TNFRSF1A-212ENST00000539372 TBC1D32Q96NH3 1257 aa21.1■□□□□ 0.97
TNFRSF1A-212ENST00000539372 DDX19AQ9NUU7 478 aaKnown RBP21.1■□□□□ 0.97
TNFRSF1A-212ENST00000539372 MUTYHQ9UIF7 546 aa21.1■□□□□ 0.97
TNFRSF1A-212ENST00000539372 PRG3Q9Y2Y8 225 aaPredicted RBP21.1■□□□□ 0.97
TNFRSF1A-212ENST00000539372 A0A1B0GUA9 196 aa21.09■□□□□ 0.97
TNFRSF1A-212ENST00000539372 NRP1O14786 923 aa21.09■□□□□ 0.97
TNFRSF1A-212ENST00000539372 MUTP22033 750 aa21.09■□□□□ 0.97
TNFRSF1A-212ENST00000539372 PDIA5Q14554 519 aa21.09■□□□□ 0.97
TNFRSF1A-212ENST00000539372 SLC27A1Q6PCB7 646 aa21.09■□□□□ 0.97
TNFRSF1A-212ENST00000539372 RNF135Q8IUD6 432 aa21.09■□□□□ 0.97
TNFRSF1A-212ENST00000539372 COLGALT2Q8IYK4 626 aa21.09■□□□□ 0.97
TNFRSF1A-212ENST00000539372 HACE1Q8IYU2 909 aa21.09■□□□□ 0.97
TNFRSF1A-212ENST00000539372 IGSF22Q8N9C0 903 aa21.09■□□□□ 0.97
TNFRSF1A-212ENST00000539372 KIFC3Q9BVG8 833 aa21.09■□□□□ 0.97
TNFRSF1A-212ENST00000539372 RAB34Q9BZG1 259 aa21.09■□□□□ 0.97
TNFRSF1A-212ENST00000539372 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.09■□□□□ 0.97
TNFRSF1A-212ENST00000539372 PRMT7Q9NVM4 692 aaPredicted RBP21.09■□□□□ 0.97
TNFRSF1A-212ENST00000539372 CDH22Q9UJ99 828 aa21.09■□□□□ 0.97
TNFRSF1A-212ENST00000539372 USP20Q9Y2K6 914 aa21.09■□□□□ 0.97
TNFRSF1A-212ENST00000539372 TTLL13PA6NNM8 815 aa21.08■□□□□ 0.97
TNFRSF1A-212ENST00000539372 H3BQV1 296 aa21.08■□□□□ 0.97
TNFRSF1A-212ENST00000539372 INPPL1O15357 1258 aa21.08■□□□□ 0.97
TNFRSF1A-212ENST00000539372 CDC25AP30304 524 aa21.08■□□□□ 0.97
TNFRSF1A-212ENST00000539372 OR1G1P47890 313 aa21.08■□□□□ 0.97
TNFRSF1A-212ENST00000539372 TMEM132AQ24JP5 1023 aa21.08■□□□□ 0.97
TNFRSF1A-212ENST00000539372 PPP4R3CPQ6ZMV5 832 aa21.08■□□□□ 0.97
TNFRSF1A-212ENST00000539372 DEPTORQ8TB45 409 aa21.08■□□□□ 0.97
TNFRSF1A-212ENST00000539372 RPGRIP1Q96KN7 1286 aa21.08■□□□□ 0.97
TNFRSF1A-212ENST00000539372 PHF7Q9BWX1 381 aaPredicted RBP21.08■□□□□ 0.97
TNFRSF1A-212ENST00000539372 C2orf40Q9H1Z8 148 aa21.08■□□□□ 0.97
TNFRSF1A-212ENST00000539372 FZD8Q9H461 694 aa21.08■□□□□ 0.97
TNFRSF1A-212ENST00000539372 MARCH5Q9NX47 278 aa21.08■□□□□ 0.97
TNFRSF1A-212ENST00000539372 KLK14Q9P0G3 267 aa21.08■□□□□ 0.97
TNFRSF1A-212ENST00000539372 PARP2Q9UGN5 583 aa21.08■□□□□ 0.97
TNFRSF1A-212ENST00000539372 GIT1Q9Y2X7 761 aa21.08■□□□□ 0.97
TNFRSF1A-212ENST00000539372 LOC730098B7Z3J9 87 aa21.07■□□□□ 0.96
TNFRSF1A-212ENST00000539372 LAD1O00515 517 aa21.07■□□□□ 0.96
TNFRSF1A-212ENST00000539372 HOXB8P17481 243 aaPredicted RBP21.07■□□□□ 0.96
TNFRSF1A-212ENST00000539372 MCM2P49736 904 aa21.07■□□□□ 0.96
TNFRSF1A-212ENST00000539372 GIT2Q14161 759 aa21.07■□□□□ 0.96
TNFRSF1A-212ENST00000539372 CBX2Q14781 532 aaPredicted RBP21.07■□□□□ 0.96
TNFRSF1A-212ENST00000539372 PTPN14Q15678 1187 aa21.07■□□□□ 0.96
TNFRSF1A-212ENST00000539372 MAPK6Q16659 721 aa21.07■□□□□ 0.96
TNFRSF1A-212ENST00000539372 FAM187BQ17R55 369 aa21.07■□□□□ 0.96
TNFRSF1A-212ENST00000539372 KRT79Q5XKE5 535 aa21.07■□□□□ 0.96
TNFRSF1A-212ENST00000539372 DTHD1Q6ZMT9 781 aa21.07■□□□□ 0.96
TNFRSF1A-212ENST00000539372 PRIMPOLQ96LW4 560 aa21.07■□□□□ 0.96
TNFRSF1A-212ENST00000539372 SMC3Q9UQE7 1217 aa21.07■□□□□ 0.96
TNFRSF1A-212ENST00000539372 IRAK3Q9Y616 596 aa21.07■□□□□ 0.96
TNFRSF1A-212ENST00000539372 STK24Q9Y6E0 443 aa21.07■□□□□ 0.96
TNFRSF1A-212ENST00000539372 E9PMD0 336 aa21.06■□□□□ 0.96
TNFRSF1A-212ENST00000539372 F8W810 466 aa21.06■□□□□ 0.96
TNFRSF1A-212ENST00000539372 PRKCBP05771 671 aa21.06■□□□□ 0.96
TNFRSF1A-212ENST00000539372 EPCAMP16422 314 aa21.06■□□□□ 0.96
TNFRSF1A-212ENST00000539372 SP100P23497 879 aaPredicted RBP21.06■□□□□ 0.96
TNFRSF1A-212ENST00000539372 PRPHP41219 470 aa21.06■□□□□ 0.96
TNFRSF1A-212ENST00000539372 NAMPTP43490 491 aa21.06■□□□□ 0.96
TNFRSF1A-212ENST00000539372 DSC1Q08554 894 aa21.06■□□□□ 0.96
TNFRSF1A-212ENST00000539372 PRPF4BQ13523 1007 aaKnown RBP21.06■□□□□ 0.96
TNFRSF1A-212ENST00000539372 TPRNQ4KMQ1 711 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms