RNA–Protein interactions for RNA: ENST00000539204.5

YBX3-207, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 649 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-207ENST00000539204 MRPL10Q7Z7H8 261 aaKnown RBP13.56□□□□□ -0.24
YBX3-207ENST00000539204 FDXACB1Q9BRP7 624 aaPredicted RBP13.56□□□□□ -0.24
YBX3-207ENST00000539204 IL25Q9H293 177 aa13.56□□□□□ -0.24
YBX3-207ENST00000539204 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.56□□□□□ -0.24
YBX3-207ENST00000539204 MYH9P35579 1960 aaKnown RBP13.55□□□□□ -0.24
YBX3-207ENST00000539204 GDF9O60383 454 aa13.55□□□□□ -0.24
YBX3-207ENST00000539204 ZMYND10O75800 440 aa13.55□□□□□ -0.24
YBX3-207ENST00000539204 FZD5Q13467 585 aa13.55□□□□□ -0.24
YBX3-207ENST00000539204 DRP2Q13474 957 aa13.55□□□□□ -0.24
YBX3-207ENST00000539204 SIM2Q14190 667 aaPredicted RBP13.55□□□□□ -0.24
YBX3-207ENST00000539204 WWC2Q6AWC2 1192 aa13.55□□□□□ -0.24
YBX3-207ENST00000539204 B4GALNT3Q6L9W6 998 aa13.55□□□□□ -0.24
YBX3-207ENST00000539204 MAMSTRQ6ZN01 415 aa13.55□□□□□ -0.24
YBX3-207ENST00000539204 TPRG1Q6ZUI0 275 aa13.55□□□□□ -0.24
YBX3-207ENST00000539204 ZNF410Q86VK4 478 aa13.55□□□□□ -0.24
YBX3-207ENST00000539204 GLYCTKQ8IVS8 523 aa13.55□□□□□ -0.24
YBX3-207ENST00000539204 MB21D2Q8IYB1 491 aaPredicted RBP13.55□□□□□ -0.24
YBX3-207ENST00000539204 COLGALT2Q8IYK4 626 aa13.55□□□□□ -0.24
YBX3-207ENST00000539204 FANCBQ8NB91 859 aa13.55□□□□□ -0.24
YBX3-207ENST00000539204 FGF13Q92913 245 aa13.55□□□□□ -0.24
YBX3-207ENST00000539204 MTA3Q9BTC8 594 aa13.55□□□□□ -0.24
YBX3-207ENST00000539204 PHF20Q9BVI0 1012 aa13.55□□□□□ -0.24
YBX3-207ENST00000539204 GLT8D2Q9H1C3 349 aa13.55□□□□□ -0.24
YBX3-207ENST00000539204 CHST7Q9NS84 486 aa13.55□□□□□ -0.24
YBX3-207ENST00000539204 MARCH5Q9NX47 278 aa13.55□□□□□ -0.24
YBX3-207ENST00000539204 FNIP2Q9P278 1114 aa13.55□□□□□ -0.24
YBX3-207ENST00000539204 TAF6LQ9Y6J9 622 aa13.55□□□□□ -0.24
YBX3-207ENST00000539204 CNTNAP2Q9UHC6 1331 aa13.55□□□□□ -0.24
YBX3-207ENST00000539204 IGLV3-22A0A075B6J6 115 aa13.54□□□□□ -0.24
YBX3-207ENST00000539204 WDR64B1ANS9 1081 aa13.54□□□□□ -0.24
YBX3-207ENST00000539204 ZNF862O60290 1169 aa13.54□□□□□ -0.24
YBX3-207ENST00000539204 EFEMP2O95967 443 aa13.54□□□□□ -0.24
YBX3-207ENST00000539204 CYP3A4P08684 503 aa13.54□□□□□ -0.24
YBX3-207ENST00000539204 PTH1RQ03431 593 aa13.54□□□□□ -0.24
YBX3-207ENST00000539204 USP41Q3LFD5 358 aa13.54□□□□□ -0.24
YBX3-207ENST00000539204 TYW1BQ6NUM6 668 aa13.54□□□□□ -0.24
YBX3-207ENST00000539204 PPP1R18Q6NYC8 613 aa13.54□□□□□ -0.24
YBX3-207ENST00000539204 RHPN2Q8IUC4 686 aa13.54□□□□□ -0.24
YBX3-207ENST00000539204 RNF168Q8IYW5 571 aaPredicted RBP13.54□□□□□ -0.24
YBX3-207ENST00000539204 COLEC11Q9BWP8 271 aa13.54□□□□□ -0.24
YBX3-207ENST00000539204 UBN1Q9NPG3 1134 aa13.54□□□□□ -0.24
YBX3-207ENST00000539204 DISC1Q9NRI5 854 aa13.54□□□□□ -0.24
YBX3-207ENST00000539204 SUCLA2Q9P2R7 463 aaPredicted RBP13.54□□□□□ -0.24
YBX3-207ENST00000539204 SLC12A7Q9Y666 1083 aa13.54□□□□□ -0.24
YBX3-207ENST00000539204 CEP295Q9C0D2 2601 aa13.53□□□□□ -0.24
YBX3-207ENST00000539204 PRC1O43663 620 aa13.53□□□□□ -0.24
YBX3-207ENST00000539204 TDGF1P13385 188 aa13.53□□□□□ -0.24
YBX3-207ENST00000539204 CLK2P49760 499 aaKnown RBP13.53□□□□□ -0.24
YBX3-207ENST00000539204 NTHL1P78549 312 aa13.53□□□□□ -0.24
YBX3-207ENST00000539204 SETQ01105 290 aaPredicted RBP13.53□□□□□ -0.24
YBX3-207ENST00000539204 PRKCEQ02156 737 aa13.53□□□□□ -0.24
YBX3-207ENST00000539204 CREMQ03060 361 aa13.53□□□□□ -0.24
YBX3-207ENST00000539204 TMTC3Q6ZXV5 915 aa13.53□□□□□ -0.24
YBX3-207ENST00000539204 GPR65Q8IYL9 337 aa13.53□□□□□ -0.24
YBX3-207ENST00000539204 TMEM87BQ96K49 555 aa13.53□□□□□ -0.24
YBX3-207ENST00000539204 B3GALT6Q96L58 329 aa13.53□□□□□ -0.24
YBX3-207ENST00000539204 KXD1Q9BQD3 176 aa13.53□□□□□ -0.24
YBX3-207ENST00000539204 HEBP1Q9NRV9 189 aa13.53□□□□□ -0.24
YBX3-207ENST00000539204 POLIQ9UNA4 740 aa13.53□□□□□ -0.24
YBX3-207ENST00000539204 PATJQ8NI35 1801 aa13.53□□□□□ -0.24
YBX3-207ENST00000539204 MAN2B1O00754 1011 aa13.52□□□□□ -0.25
YBX3-207ENST00000539204 HNRNPA1P09651 372 aaKnown RBP eCLIP13.52□□□□□ -0.25
YBX3-207ENST00000539204 RPL17P18621 184 aaKnown RBP13.52□□□□□ -0.25
YBX3-207ENST00000539204 MCM5P33992 734 aa13.52□□□□□ -0.25
YBX3-207ENST00000539204 TARBP2Q15633 366 aaKnown RBP13.52□□□□□ -0.25
YBX3-207ENST00000539204 JAKMIP3Q5VZ66 844 aa13.52□□□□□ -0.25
YBX3-207ENST00000539204 CHD1LQ86WJ1 897 aa13.52□□□□□ -0.25
YBX3-207ENST00000539204 RAB11FIP4Q86YS3 637 aa13.52□□□□□ -0.25
YBX3-207ENST00000539204 ITFG1Q8TB96 612 aa13.52□□□□□ -0.25
YBX3-207ENST00000539204 COL26A1Q96A83 441 aa13.52□□□□□ -0.25
YBX3-207ENST00000539204 MBOAT7Q96N66 472 aa13.52□□□□□ -0.25
YBX3-207ENST00000539204 NIFKQ9BYG3 293 aaKnown RBP13.52□□□□□ -0.25
YBX3-207ENST00000539204 ZMIZ1Q9ULJ6 1067 aa13.52□□□□□ -0.25
YBX3-207ENST00000539204 COL4A3Q01955 1670 aa13.52□□□□□ -0.25
YBX3-207ENST00000539204 FRYQ5TBA9 3013 aa13.52□□□□□ -0.25
YBX3-207ENST00000539204 MTCL1Q9Y4B5 1905 aaKnown RBP13.51□□□□□ -0.25
YBX3-207ENST00000539204 IGKV6-21A0A0C4DH24 114 aa13.51□□□□□ -0.25
YBX3-207ENST00000539204 SH2B2O14492 632 aaPredicted RBP13.51□□□□□ -0.25
YBX3-207ENST00000539204 XYLBO75191 536 aa13.51□□□□□ -0.25
YBX3-207ENST00000539204 ITGA4P13612 1032 aa13.51□□□□□ -0.25
YBX3-207ENST00000539204 CNR2P34972 360 aa13.51□□□□□ -0.25
YBX3-207ENST00000539204 LIFRP42702 1097 aa13.51□□□□□ -0.25
YBX3-207ENST00000539204 CXCL12P48061 93 aa13.51□□□□□ -0.25
YBX3-207ENST00000539204 CCR3P51677 355 aa13.51□□□□□ -0.25
YBX3-207ENST00000539204 LIMK1P53667 647 aa13.51□□□□□ -0.25
YBX3-207ENST00000539204 MTERF2Q49AM1 385 aa13.51□□□□□ -0.25
YBX3-207ENST00000539204 PRR16Q569H4 304 aa13.51□□□□□ -0.25
YBX3-207ENST00000539204 PPM1LQ5SGD2 360 aa13.51□□□□□ -0.25
YBX3-207ENST00000539204 LIN9Q5TKA1 542 aa13.51□□□□□ -0.25
YBX3-207ENST00000539204 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.51□□□□□ -0.25
YBX3-207ENST00000539204 KSR1Q8IVT5 923 aa13.51□□□□□ -0.25
YBX3-207ENST00000539204 CNNM3Q8NE01 707 aa13.51□□□□□ -0.25
YBX3-207ENST00000539204 RUFY2Q8WXA3 655 aa13.51□□□□□ -0.25
YBX3-207ENST00000539204 CRYGNQ8WXF5 182 aa13.51□□□□□ -0.25
YBX3-207ENST00000539204 NLRP4Q96MN2 994 aa13.51□□□□□ -0.25
YBX3-207ENST00000539204 IER2Q9BTL4 223 aa13.51□□□□□ -0.25
YBX3-207ENST00000539204 CHRDQ9H2X0 955 aa13.51□□□□□ -0.25
YBX3-207ENST00000539204 AGPAT5Q9NUQ2 364 aa13.51□□□□□ -0.25
YBX3-207ENST00000539204 NDRG2Q9UN36 371 aaKnown RBP13.51□□□□□ -0.25
YBX3-207ENST00000539204 V9GY48 417 aaPredicted RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms