RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 PCBP1Q15365 356 aaKnown RBP eCLIP16.58■□□□□ 0.24
RAB40B-202ENST00000538809 SNX29Q8TEQ0 813 aa16.58■□□□□ 0.24
RAB40B-202ENST00000538809 CCDC51Q96ER9 411 aa16.58■□□□□ 0.24
RAB40B-202ENST00000538809 VN1R3Q9BXE9 311 aa16.58■□□□□ 0.24
RAB40B-202ENST00000538809 NFKBIZQ9BYH8 718 aa16.58■□□□□ 0.24
RAB40B-202ENST00000538809 TRIM6Q9C030 488 aaPredicted RBP16.58■□□□□ 0.24
RAB40B-202ENST00000538809 ZBP1Q9H171 429 aa16.58■□□□□ 0.24
RAB40B-202ENST00000538809 POLD4Q9HCU8 107 aa16.58■□□□□ 0.24
RAB40B-202ENST00000538809 SMC3Q9UQE7 1217 aa16.58■□□□□ 0.24
RAB40B-202ENST00000538809 VWA8A3KMH1 1905 aa16.57■□□□□ 0.24
RAB40B-202ENST00000538809 FSD2A1L4K1 749 aa16.57■□□□□ 0.24
RAB40B-202ENST00000538809 C19orf67A6NJJ6 358 aa16.57■□□□□ 0.24
RAB40B-202ENST00000538809 SRGAP2BP0DMP2 458 aa16.57■□□□□ 0.24
RAB40B-202ENST00000538809 LIG1P18858 919 aa16.57■□□□□ 0.24
RAB40B-202ENST00000538809 PRPHP41219 470 aa16.57■□□□□ 0.24
RAB40B-202ENST00000538809 NCBP1Q09161 790 aaKnown RBP16.57■□□□□ 0.24
RAB40B-202ENST00000538809 KCNC3Q14003 757 aa16.57■□□□□ 0.24
RAB40B-202ENST00000538809 PDIA5Q14554 519 aa16.57■□□□□ 0.24
RAB40B-202ENST00000538809 IL17AQ16552 155 aa16.57■□□□□ 0.24
RAB40B-202ENST00000538809 CDCA2Q69YH5 1023 aaPredicted RBP16.57■□□□□ 0.24
RAB40B-202ENST00000538809 CNNM3Q8NE01 707 aa16.57■□□□□ 0.24
RAB40B-202ENST00000538809 ZFP42Q96MM3 310 aa16.57■□□□□ 0.24
RAB40B-202ENST00000538809 FAM193BQ96PV7 902 aaPredicted RBP16.57■□□□□ 0.24
RAB40B-202ENST00000538809 GAD1Q99259 594 aa16.57■□□□□ 0.24
RAB40B-202ENST00000538809 BHMT2Q9H2M3 363 aa16.57■□□□□ 0.24
RAB40B-202ENST00000538809 C11orf16Q9NQ32 467 aa16.57■□□□□ 0.24
RAB40B-202ENST00000538809 DDX19AQ9NUU7 478 aaKnown RBP16.57■□□□□ 0.24
RAB40B-202ENST00000538809 KIAA1024Q9UPX6 916 aa16.57■□□□□ 0.24
RAB40B-202ENST00000538809 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.57■□□□□ 0.24
RAB40B-202ENST00000538809 MYO10Q9HD67 2058 aa16.57■□□□□ 0.24
RAB40B-202ENST00000538809 ARL5CA6NH57 179 aa16.56■□□□□ 0.24
RAB40B-202ENST00000538809 TTLL13PA6NNM8 815 aa16.56■□□□□ 0.24
RAB40B-202ENST00000538809 PI4K2BG5E9Z4 385 aa16.56■□□□□ 0.24
RAB40B-202ENST00000538809 H3BQV1 296 aa16.56■□□□□ 0.24
RAB40B-202ENST00000538809 LAD1O00515 517 aa16.56■□□□□ 0.24
RAB40B-202ENST00000538809 CLASP2O75122 1294 aaKnown RBP16.56■□□□□ 0.24
RAB40B-202ENST00000538809 CXCL14O95715 111 aa16.56■□□□□ 0.24
RAB40B-202ENST00000538809 SSBP05455 408 aaKnown RBP eCLIP16.56■□□□□ 0.24
RAB40B-202ENST00000538809 CYP11B2P19099 503 aa16.56■□□□□ 0.24
RAB40B-202ENST00000538809 SCNN1GP51170 649 aa16.56■□□□□ 0.24
RAB40B-202ENST00000538809 RILPL1Q5EBL4 403 aa16.56■□□□□ 0.24
RAB40B-202ENST00000538809 ANKRD54Q6NXT1 300 aa16.56■□□□□ 0.24
RAB40B-202ENST00000538809 SLC27A1Q6PCB7 646 aa16.56■□□□□ 0.24
RAB40B-202ENST00000538809 DDX53Q86TM3 631 aaKnown RBP16.56■□□□□ 0.24
RAB40B-202ENST00000538809 ZBTB8OSQ8IWT0 167 aa16.56■□□□□ 0.24
RAB40B-202ENST00000538809 MRPL43Q8N983 215 aaKnown RBP16.56■□□□□ 0.24
RAB40B-202ENST00000538809 POP1Q99575 1024 aaKnown RBP16.56■□□□□ 0.24
RAB40B-202ENST00000538809 KIFC3Q9BVG8 833 aa16.56■□□□□ 0.24
RAB40B-202ENST00000538809 PRMT7Q9NVM4 692 aaPredicted RBP16.56■□□□□ 0.24
RAB40B-202ENST00000538809 MIOSQ9NXC5 875 aa16.56■□□□□ 0.24
RAB40B-202ENST00000538809 USP20Q9Y2K6 914 aa16.56■□□□□ 0.24
RAB40B-202ENST00000538809 PRG3Q9Y2Y8 225 aaPredicted RBP16.56■□□□□ 0.24
RAB40B-202ENST00000538809 EDN1P05305 212 aa16.55■□□□□ 0.24
RAB40B-202ENST00000538809 CTSAP10619 480 aa16.55■□□□□ 0.24
RAB40B-202ENST00000538809 AKAP5P24588 427 aa16.55■□□□□ 0.24
RAB40B-202ENST00000538809 CDC25AP30304 524 aa16.55■□□□□ 0.24
RAB40B-202ENST00000538809 ATP2C1P98194 919 aaPredicted RBP16.55■□□□□ 0.24
RAB40B-202ENST00000538809 TMEM31Q5JXX7 168 aa16.55■□□□□ 0.24
RAB40B-202ENST00000538809 SYCE2Q6PIF2 218 aa16.55■□□□□ 0.24
RAB40B-202ENST00000538809 PPP4R3CPQ6ZMV5 832 aa16.55■□□□□ 0.24
RAB40B-202ENST00000538809 DEPTORQ8TB45 409 aa16.55■□□□□ 0.24
RAB40B-202ENST00000538809 LRFN3Q9BTN0 628 aa16.55■□□□□ 0.24
RAB40B-202ENST00000538809 RAB34Q9BZG1 259 aa16.55■□□□□ 0.24
RAB40B-202ENST00000538809 UBN1Q9NPG3 1134 aa16.55■□□□□ 0.24
RAB40B-202ENST00000538809 MARCH5Q9NX47 278 aa16.55■□□□□ 0.24
RAB40B-202ENST00000538809 KLK14Q9P0G3 267 aa16.55■□□□□ 0.24
RAB40B-202ENST00000538809 KANSL3Q9P2N6 904 aa16.55■□□□□ 0.24
RAB40B-202ENST00000538809 CDH22Q9UJ99 828 aa16.55■□□□□ 0.24
RAB40B-202ENST00000538809 FAN1Q9Y2M0 1017 aa16.55■□□□□ 0.24
RAB40B-202ENST00000538809 HCFC2Q9Y5Z7 792 aa16.55■□□□□ 0.24
RAB40B-202ENST00000538809 CARNS1A5YM72 827 aa16.54■□□□□ 0.24
RAB40B-202ENST00000538809 E9PMD0 336 aa16.54■□□□□ 0.24
RAB40B-202ENST00000538809 F8W810 466 aa16.54■□□□□ 0.24
RAB40B-202ENST00000538809 NRP1O14786 923 aa16.54■□□□□ 0.24
RAB40B-202ENST00000538809 PRKCBP05771 671 aa16.54■□□□□ 0.24
RAB40B-202ENST00000538809 NAMPTP43490 491 aa16.54■□□□□ 0.24
RAB40B-202ENST00000538809 OR1G1P47890 313 aa16.54■□□□□ 0.24
RAB40B-202ENST00000538809 BMS1Q14692 1282 aaKnown RBP16.54■□□□□ 0.24
RAB40B-202ENST00000538809 TMEM132AQ24JP5 1023 aa16.54■□□□□ 0.24
RAB40B-202ENST00000538809 LARP1BQ659C4 914 aaKnown RBP16.54■□□□□ 0.24
RAB40B-202ENST00000538809 TMEM184AQ6ZMB5 413 aa16.54■□□□□ 0.24
RAB40B-202ENST00000538809 COLGALT2Q8IYK4 626 aa16.54■□□□□ 0.24
RAB40B-202ENST00000538809 HACE1Q8IYU2 909 aa16.54■□□□□ 0.24
RAB40B-202ENST00000538809 CASP10Q92851 521 aa16.54■□□□□ 0.24
RAB40B-202ENST00000538809 PRIMPOLQ96LW4 560 aa16.54■□□□□ 0.24
RAB40B-202ENST00000538809 TMEM175Q9BSA9 504 aa16.54■□□□□ 0.24
RAB40B-202ENST00000538809 MMTAG2Q9BU76 263 aaKnown RBP16.54■□□□□ 0.24
RAB40B-202ENST00000538809 C2orf40Q9H1Z8 148 aa16.54■□□□□ 0.24
RAB40B-202ENST00000538809 PDZD7Q9H5P4 517 aa16.54■□□□□ 0.24
RAB40B-202ENST00000538809 PARP2Q9UGN5 583 aa16.54■□□□□ 0.24
RAB40B-202ENST00000538809 TECTAO75443 2155 aa16.54■□□□□ 0.24
RAB40B-202ENST00000538809 A0A1B0GUA9 196 aa16.53■□□□□ 0.24
RAB40B-202ENST00000538809 INPPL1O15357 1258 aa16.53■□□□□ 0.24
RAB40B-202ENST00000538809 DCXO43602 365 aa16.53■□□□□ 0.24
RAB40B-202ENST00000538809 DSC1Q08554 894 aa16.53■□□□□ 0.24
RAB40B-202ENST00000538809 PRPF4BQ13523 1007 aaKnown RBP16.53■□□□□ 0.24
RAB40B-202ENST00000538809 PTPN14Q15678 1187 aa16.53■□□□□ 0.24
RAB40B-202ENST00000538809 ZRSR1Q15695 479 aaKnown RBP16.53■□□□□ 0.24
RAB40B-202ENST00000538809 KRT79Q5XKE5 535 aa16.53■□□□□ 0.24
RAB40B-202ENST00000538809 DTHD1Q6ZMT9 781 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms