RNA–Protein interactions for RNA: ENST00000538410.5

COPS7A-208, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3 BASIC

Gene COPS7A, Length 1,610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-208ENST00000538410 ZNF410Q86VK4 478 aa22.5■■□□□ 1.19
COPS7A-208ENST00000538410 DNAJB3Q8WWF6 145 aa22.5■■□□□ 1.19
COPS7A-208ENST00000538410 BICD1Q96G01 975 aa22.5■■□□□ 1.19
COPS7A-208ENST00000538410 MRFAP1L1Q96HT8 127 aa22.5■■□□□ 1.19
COPS7A-208ENST00000538410 SOX1O00570 391 aaPredicted RBP22.49■■□□□ 1.19
COPS7A-208ENST00000538410 KIAA0355O15063 1070 aa22.49■■□□□ 1.19
COPS7A-208ENST00000538410 COPB1P53618 953 aaKnown RBP22.49■■□□□ 1.19
COPS7A-208ENST00000538410 MARSP56192 900 aaKnown RBP22.49■■□□□ 1.19
COPS7A-208ENST00000538410 PTPN11Q06124 597 aaPredicted RBP22.49■■□□□ 1.19
COPS7A-208ENST00000538410 ITGA7Q13683 1181 aa22.49■■□□□ 1.19
COPS7A-208ENST00000538410 MAPK6Q16659 721 aa22.49■■□□□ 1.19
COPS7A-208ENST00000538410 NLRP7Q8WX94 980 aa22.49■■□□□ 1.19
COPS7A-208ENST00000538410 PPP1R16BQ96T49 567 aa22.49■■□□□ 1.19
COPS7A-208ENST00000538410 FZD8Q9H461 694 aa22.49■■□□□ 1.19
COPS7A-208ENST00000538410 A0A1B0GTH6 734 aa22.49■■□□□ 1.19
COPS7A-208ENST00000538410 SLC16A3O15427 465 aaKnown RBP22.49■■□□□ 1.19
COPS7A-208ENST00000538410 EDN1P05305 212 aa22.49■■□□□ 1.19
COPS7A-208ENST00000538410 PRKCBP05771 671 aa22.49■■□□□ 1.19
COPS7A-208ENST00000538410 RAG1P15918 1043 aa22.49■■□□□ 1.19
COPS7A-208ENST00000538410 MTIF2P46199 727 aaKnown RBP22.49■■□□□ 1.19
COPS7A-208ENST00000538410 LIG4P49917 911 aa22.49■■□□□ 1.19
COPS7A-208ENST00000538410 CYP2J2P51589 502 aa22.49■■□□□ 1.19
COPS7A-208ENST00000538410 MBTD1Q05BQ5 628 aa22.49■■□□□ 1.19
COPS7A-208ENST00000538410 LRIT3Q3SXY7 679 aa22.49■■□□□ 1.19
COPS7A-208ENST00000538410 CCDC40Q4G0X9 1142 aa22.49■■□□□ 1.19
COPS7A-208ENST00000538410 ARMCX5Q6P1M9 558 aa22.49■■□□□ 1.19
COPS7A-208ENST00000538410 TAF2Q6P1X5 1199 aa22.49■■□□□ 1.19
COPS7A-208ENST00000538410 NME8Q8N427 588 aa22.49■■□□□ 1.19
COPS7A-208ENST00000538410 PDLIM2Q96JY6 352 aa22.49■■□□□ 1.19
COPS7A-208ENST00000538410 CBWD1Q9BRT8 395 aa22.49■■□□□ 1.19
COPS7A-208ENST00000538410 TUBGCP2Q9BSJ2 902 aa22.49■■□□□ 1.19
COPS7A-208ENST00000538410 MINDY3Q9H8M7 445 aa22.49■■□□□ 1.19
COPS7A-208ENST00000538410 TAB2Q9NYJ8 693 aa22.49■■□□□ 1.19
COPS7A-208ENST00000538410 INO80B-WBP1J3KQ70 363 aa22.48■■□□□ 1.19
COPS7A-208ENST00000538410 GPR32O75388 356 aa22.48■■□□□ 1.19
COPS7A-208ENST00000538410 AKAP3O75969 853 aa22.48■■□□□ 1.19
COPS7A-208ENST00000538410 GARTP22102 1010 aa22.48■■□□□ 1.19
COPS7A-208ENST00000538410 ADSSP30520 456 aa22.48■■□□□ 1.19
COPS7A-208ENST00000538410 CASP4P49662 377 aa22.48■■□□□ 1.19
COPS7A-208ENST00000538410 FILIP1LQ4L180 1135 aa22.48■■□□□ 1.19
COPS7A-208ENST00000538410 CEP135Q66GS9 1140 aa22.48■■□□□ 1.19
COPS7A-208ENST00000538410 ZPBP2Q6X784 338 aa22.48■■□□□ 1.19
COPS7A-208ENST00000538410 LRCH3Q96II8 777 aa22.48■■□□□ 1.19
COPS7A-208ENST00000538410 MKNK1Q9BUB5 465 aa22.48■■□□□ 1.19
COPS7A-208ENST00000538410 MRPL4Q9BYD3 311 aaKnown RBP22.48■■□□□ 1.19
COPS7A-208ENST00000538410 INO80BQ9C086 356 aaPredicted RBP22.48■■□□□ 1.19
COPS7A-208ENST00000538410 VPS16Q9H269 839 aa22.48■■□□□ 1.19
COPS7A-208ENST00000538410 ADAMTS10Q9H324 1103 aa22.48■■□□□ 1.19
COPS7A-208ENST00000538410 PCIF1Q9H4Z3 704 aa22.48■■□□□ 1.19
COPS7A-208ENST00000538410 HSPBP1Q9NZL4 362 aa22.48■■□□□ 1.19
COPS7A-208ENST00000538410 ACKR2O00590 384 aa22.47■■□□□ 1.19
COPS7A-208ENST00000538410 TMEM62Q0P6H9 643 aa22.47■■□□□ 1.19
COPS7A-208ENST00000538410 CCDC173Q0VFZ6 552 aa22.47■■□□□ 1.19
COPS7A-208ENST00000538410 NR1I3Q14994 352 aa22.47■■□□□ 1.19
COPS7A-208ENST00000538410 FAM187BQ17R55 369 aa22.47■■□□□ 1.19
COPS7A-208ENST00000538410 KIZQ2M2Z5 673 aa22.47■■□□□ 1.19
COPS7A-208ENST00000538410 SRGAP1Q7Z6B7 1085 aa22.47■■□□□ 1.19
COPS7A-208ENST00000538410 FRMD5Q7Z6J6 570 aa22.47■■□□□ 1.19
COPS7A-208ENST00000538410 SCLT1Q96NL6 688 aa22.47■■□□□ 1.19
COPS7A-208ENST00000538410 TARS2Q9BW92 718 aaKnown RBP22.47■■□□□ 1.19
COPS7A-208ENST00000538410 PRMT7Q9NVM4 692 aaPredicted RBP22.47■■□□□ 1.19
COPS7A-208ENST00000538410 USP20Q9Y2K6 914 aa22.47■■□□□ 1.19
COPS7A-208ENST00000538410 FRMD4BQ9Y2L6 1034 aa22.47■■□□□ 1.19
COPS7A-208ENST00000538410 STYXL1Q9Y6J8 313 aa22.47■■□□□ 1.19
COPS7A-208ENST00000538410 TLR3O15455 904 aaKnown RBP22.46■■□□□ 1.19
COPS7A-208ENST00000538410 EXOC3O60645 756 aa22.46■■□□□ 1.19
COPS7A-208ENST00000538410 TPM3P06753 285 aa22.46■■□□□ 1.19
COPS7A-208ENST00000538410 EPB41P11171 864 aaKnown RBP22.46■■□□□ 1.19
COPS7A-208ENST00000538410 ITGB8P26012 769 aa22.46■■□□□ 1.19
COPS7A-208ENST00000538410 CDC25BP30305 580 aa22.46■■□□□ 1.19
COPS7A-208ENST00000538410 PSMC2P35998 433 aaKnown RBP22.46■■□□□ 1.19
COPS7A-208ENST00000538410 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.46■■□□□ 1.19
COPS7A-208ENST00000538410 SERINC5Q86VE9 423 aa22.46■■□□□ 1.19
COPS7A-208ENST00000538410 ZNF710Q8N1W2 664 aa22.46■■□□□ 1.19
COPS7A-208ENST00000538410 XXYLT1Q8NBI6 393 aa22.46■■□□□ 1.19
COPS7A-208ENST00000538410 POMGNT1Q8WZA1 660 aa22.46■■□□□ 1.19
COPS7A-208ENST00000538410 RTN4Q9NQC3 1192 aaKnown RBP22.46■■□□□ 1.19
COPS7A-208ENST00000538410 INTS13Q9NVM9 706 aa22.46■■□□□ 1.19
COPS7A-208ENST00000538410 N4BP3O15049 544 aa22.46■■□□□ 1.19
COPS7A-208ENST00000538410 PRKCSHP14314 528 aaPredicted RBP22.46■■□□□ 1.19
COPS7A-208ENST00000538410 MAN2A1Q16706 1144 aa22.46■■□□□ 1.19
COPS7A-208ENST00000538410 SLFN12LQ6IEE8 588 aa22.46■■□□□ 1.19
COPS7A-208ENST00000538410 TRIM59Q8IWR1 403 aa22.46■■□□□ 1.19
COPS7A-208ENST00000538410 FAM126BQ8IXS8 530 aa22.46■■□□□ 1.19
COPS7A-208ENST00000538410 FAM186BQ8IYM0 893 aa22.46■■□□□ 1.19
COPS7A-208ENST00000538410 SLC43A3Q8NBI5 491 aa22.46■■□□□ 1.19
COPS7A-208ENST00000538410 PPP1R9BQ96SB3 815 aa22.46■■□□□ 1.19
COPS7A-208ENST00000538410 ACO2Q99798 780 aaKnown RBP22.46■■□□□ 1.19
COPS7A-208ENST00000538410 SEZ6LQ9BYH1 1024 aa22.46■■□□□ 1.19
COPS7A-208ENST00000538410 GCOM2Q9BZD3 368 aaPredicted RBP22.46■■□□□ 1.19
COPS7A-208ENST00000538410 METTL14Q9HCE5 456 aaKnown RBP22.46■■□□□ 1.19
COPS7A-208ENST00000538410 TTLL13PA6NNM8 815 aa22.45■■□□□ 1.18
COPS7A-208ENST00000538410 TPM2P07951 284 aa22.45■■□□□ 1.18
COPS7A-208ENST00000538410 IQCF3P0C7M6 154 aa22.45■■□□□ 1.18
COPS7A-208ENST00000538410 PRPF4BQ13523 1007 aaKnown RBP22.45■■□□□ 1.18
COPS7A-208ENST00000538410 PTGISQ16647 500 aa22.45■■□□□ 1.18
COPS7A-208ENST00000538410 MIIPQ5JXC2 388 aa22.45■■□□□ 1.18
COPS7A-208ENST00000538410 PRIMPOLQ96LW4 560 aa22.45■■□□□ 1.18
COPS7A-208ENST00000538410 NOC4LQ9BVI4 516 aaKnown RBP22.45■■□□□ 1.18
COPS7A-208ENST00000538410 CDHR5Q9HBB8 845 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms