RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 TDHQ8IZJ6 230 aa3.91□□□□□ -1.78
PTPN22-211ENST00000538253 BEST2Q8NFU1 509 aa3.91□□□□□ -1.78
PTPN22-211ENST00000538253 RAD9AQ99638 391 aa3.91□□□□□ -1.78
PTPN22-211ENST00000538253 IFIH1Q9BYX4 1025 aaKnown RBP3.91□□□□□ -1.78
PTPN22-211ENST00000538253 CSRNP2Q9H175 543 aa3.91□□□□□ -1.78
PTPN22-211ENST00000538253 BHMT2Q9H2M3 363 aa3.91□□□□□ -1.78
PTPN22-211ENST00000538253 ZHX3Q9H4I2 956 aa3.91□□□□□ -1.78
PTPN22-211ENST00000538253 IGSF5Q9NSI5 407 aa3.91□□□□□ -1.78
PTPN22-211ENST00000538253 IRAK4Q9NWZ3 460 aa3.91□□□□□ -1.78
PTPN22-211ENST00000538253 TPX2Q9ULW0 747 aaKnown RBP3.91□□□□□ -1.78
PTPN22-211ENST00000538253 TNFSF13BQ9Y275 285 aa3.91□□□□□ -1.78
PTPN22-211ENST00000538253 PCDHB6Q9Y5E3 794 aa3.91□□□□□ -1.78
PTPN22-211ENST00000538253 MGAMO43451 1857 aa3.9□□□□□ -1.78
PTPN22-211ENST00000538253 H0YHG0 523 aa3.9□□□□□ -1.78
PTPN22-211ENST00000538253 SLC37A4O43826 429 aa3.9□□□□□ -1.78
PTPN22-211ENST00000538253 TRAK2O60296 914 aa3.9□□□□□ -1.78
PTPN22-211ENST00000538253 RGS20O76081 388 aa3.9□□□□□ -1.78
PTPN22-211ENST00000538253 SLITRK3O94933 977 aa3.9□□□□□ -1.78
PTPN22-211ENST00000538253 ARIH2O95376 493 aa3.9□□□□□ -1.78
PTPN22-211ENST00000538253 ZNF286BP0CG31 522 aa3.9□□□□□ -1.78
PTPN22-211ENST00000538253 CKBP12277 381 aa3.9□□□□□ -1.78
PTPN22-211ENST00000538253 CYP3A5P20815 502 aa3.9□□□□□ -1.78
PTPN22-211ENST00000538253 MARK3P27448 753 aa3.9□□□□□ -1.78
PTPN22-211ENST00000538253 RPL9P32969 192 aaKnown RBP3.9□□□□□ -1.78
PTPN22-211ENST00000538253 NLRP11P59045 1033 aaKnown RBP3.9□□□□□ -1.78
PTPN22-211ENST00000538253 SARNPP82979 210 aaKnown RBP3.9□□□□□ -1.78
PTPN22-211ENST00000538253 PLD1Q13393 1074 aa3.9□□□□□ -1.78
PTPN22-211ENST00000538253 LRIT3Q3SXY7 679 aa3.9□□□□□ -1.78
PTPN22-211ENST00000538253 HERC4Q5GLZ8 1057 aaPredicted RBP3.9□□□□□ -1.78
PTPN22-211ENST00000538253 FBXO47Q5MNV8 452 aa3.9□□□□□ -1.78
PTPN22-211ENST00000538253 ZNF697Q5TEC3 545 aa3.9□□□□□ -1.78
PTPN22-211ENST00000538253 METTL23Q86XA0 190 aa3.9□□□□□ -1.78
PTPN22-211ENST00000538253 MLKLQ8NB16 471 aa3.9□□□□□ -1.78
PTPN22-211ENST00000538253 KAT2BQ92831 832 aa3.9□□□□□ -1.78
PTPN22-211ENST00000538253 HAS1Q92839 578 aa3.9□□□□□ -1.78
PTPN22-211ENST00000538253 PMM1Q92871 262 aa3.9□□□□□ -1.78
PTPN22-211ENST00000538253 DHTKD1Q96HY7 919 aaPredicted RBP3.9□□□□□ -1.78
PTPN22-211ENST00000538253 AIFM3Q96NN9 605 aa3.9□□□□□ -1.78
PTPN22-211ENST00000538253 USP28Q96RU2 1077 aa3.9□□□□□ -1.78
PTPN22-211ENST00000538253 LARP6Q9BRS8 491 aaKnown RBP3.9□□□□□ -1.78
PTPN22-211ENST00000538253 NTPCRQ9BSD7 190 aaKnown RBP3.9□□□□□ -1.78
PTPN22-211ENST00000538253 MKNK1Q9BUB5 465 aa3.9□□□□□ -1.78
PTPN22-211ENST00000538253 ASB7Q9H672 318 aa3.9□□□□□ -1.78
PTPN22-211ENST00000538253 ANO10Q9NW15 660 aa3.9□□□□□ -1.78
PTPN22-211ENST00000538253 SUN2Q9UH99 717 aa3.9□□□□□ -1.78
PTPN22-211ENST00000538253 FBXO2Q9UK22 296 aaPredicted RBP3.9□□□□□ -1.78
PTPN22-211ENST00000538253 LZTS1Q9Y250 596 aa3.9□□□□□ -1.78
PTPN22-211ENST00000538253 PAXBP1Q9Y5B6 917 aa3.9□□□□□ -1.78
PTPN22-211ENST00000538253 UMODL1Q5DID0 1318 aa3.9□□□□□ -1.79
PTPN22-211ENST00000538253 K7ENM7 598 aa3.9□□□□□ -1.79
PTPN22-211ENST00000538253 CETN3O15182 167 aa3.9□□□□□ -1.79
PTPN22-211ENST00000538253 ATP9AO75110 1047 aa3.9□□□□□ -1.79
PTPN22-211ENST00000538253 TOM1L1O75674 476 aa3.9□□□□□ -1.79
PTPN22-211ENST00000538253 CCNE2O96020 404 aa3.9□□□□□ -1.79
PTPN22-211ENST00000538253 MYCP01106 439 aaPredicted RBP3.9□□□□□ -1.79
PTPN22-211ENST00000538253 TNNC2P02585 160 aa3.9□□□□□ -1.79
PTPN22-211ENST00000538253 DESP17661 470 aa3.9□□□□□ -1.79
PTPN22-211ENST00000538253 ARL2P36404 184 aa3.9□□□□□ -1.79
PTPN22-211ENST00000538253 GPC3P51654 580 aa3.9□□□□□ -1.79
PTPN22-211ENST00000538253 RNASELQ05823 741 aaKnown RBP3.9□□□□□ -1.79
PTPN22-211ENST00000538253 LRRC63Q05C16 580 aa3.9□□□□□ -1.79
PTPN22-211ENST00000538253 TRIM32Q13049 653 aa3.9□□□□□ -1.79
PTPN22-211ENST00000538253 CTTNQ14247 550 aaKnown RBP3.9□□□□□ -1.79
PTPN22-211ENST00000538253 FILIP1LQ4L180 1135 aa3.9□□□□□ -1.79
PTPN22-211ENST00000538253 COBLL1Q53SF7 1204 aa3.9□□□□□ -1.79
PTPN22-211ENST00000538253 SPOUT1Q5T280 376 aaKnown RBP3.9□□□□□ -1.79
PTPN22-211ENST00000538253 CATSPER3Q86XQ3 398 aa3.9□□□□□ -1.79
PTPN22-211ENST00000538253 RHPN2Q8IUC4 686 aa3.9□□□□□ -1.79
PTPN22-211ENST00000538253 MYOCDQ8IZQ8 938 aa3.9□□□□□ -1.79
PTPN22-211ENST00000538253 RNF149Q8NC42 400 aa3.9□□□□□ -1.79
PTPN22-211ENST00000538253 PHC3Q8NDX5 983 aa3.9□□□□□ -1.79
PTPN22-211ENST00000538253 APPL2Q8NEU8 664 aa3.9□□□□□ -1.79
PTPN22-211ENST00000538253 SYMPKQ92797 1274 aaKnown RBP3.9□□□□□ -1.79
PTPN22-211ENST00000538253 ERCC4Q92889 916 aaPredicted RBP3.9□□□□□ -1.79
PTPN22-211ENST00000538253 COPS5Q92905 334 aa3.9□□□□□ -1.79
PTPN22-211ENST00000538253 SHISA4Q96DD7 197 aa3.9□□□□□ -1.79
PTPN22-211ENST00000538253 ZNF558Q96NG5 402 aa3.9□□□□□ -1.79
PTPN22-211ENST00000538253 YME1L1Q96TA2 773 aa3.9□□□□□ -1.79
PTPN22-211ENST00000538253 GBP3Q9H0R5 595 aa3.9□□□□□ -1.79
PTPN22-211ENST00000538253 NUP62CLQ9H1M0 184 aa3.9□□□□□ -1.79
PTPN22-211ENST00000538253 MRPL44Q9H9J2 332 aaKnown RBP3.9□□□□□ -1.79
PTPN22-211ENST00000538253 RPF1Q9H9Y2 349 aaKnown RBP3.9□□□□□ -1.79
PTPN22-211ENST00000538253 SLC28A3Q9HAS3 691 aa3.9□□□□□ -1.79
PTPN22-211ENST00000538253 NGRNQ9NPE2 291 aaKnown RBP3.9□□□□□ -1.79
PTPN22-211ENST00000538253 PANK4Q9NVE7 773 aa3.9□□□□□ -1.79
PTPN22-211ENST00000538253 UBQLN1Q9UMX0 589 aaKnown RBP3.9□□□□□ -1.79
PTPN22-211ENST00000538253 POTEFA5A3E0 1075 aa3.89□□□□□ -1.79
PTPN22-211ENST00000538253 ANKRD33BA6NCL7 494 aa3.89□□□□□ -1.79
PTPN22-211ENST00000538253 CLDN3O15551 220 aa3.89□□□□□ -1.79
PTPN22-211ENST00000538253 FGF19O95750 216 aa3.89□□□□□ -1.79
PTPN22-211ENST00000538253 PIGRP01833 764 aa3.89□□□□□ -1.79
PTPN22-211ENST00000538253 RPN1P04843 607 aaKnown RBP3.89□□□□□ -1.79
PTPN22-211ENST00000538253 CCDC192P0DO97 292 aa3.89□□□□□ -1.79
PTPN22-211ENST00000538253 EPB41P11171 864 aaKnown RBP3.89□□□□□ -1.79
PTPN22-211ENST00000538253 ATP2A2P16615 1042 aaKnown RBP3.89□□□□□ -1.79
PTPN22-211ENST00000538253 PLCG1P19174 1290 aa3.89□□□□□ -1.79
PTPN22-211ENST00000538253 MARCKSP29966 332 aaPredicted RBP3.89□□□□□ -1.79
PTPN22-211ENST00000538253 CYP4A11Q02928 519 aa3.89□□□□□ -1.79
PTPN22-211ENST00000538253 CCDC15Q0P6D6 951 aa3.89□□□□□ -1.79
PTPN22-211ENST00000538253 FAAP100Q0VG06 881 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms