RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 EXOC3L1Q86VI1 746 aa12.19□□□□□ -0.46
SEMA4D-221ENST00000537934 GRAMD1AQ96CP6 724 aa12.19□□□□□ -0.46
SEMA4D-221ENST00000537934 SLX1AQ9BQ83 275 aa12.19□□□□□ -0.46
SEMA4D-221ENST00000537934 TRIM51Q9BSJ1 452 aa12.19□□□□□ -0.46
SEMA4D-221ENST00000537934 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.19□□□□□ -0.46
SEMA4D-221ENST00000537934 CCDC113Q9H0I3 377 aa12.19□□□□□ -0.46
SEMA4D-221ENST00000537934 MAGEF1Q9HAY2 307 aa12.19□□□□□ -0.46
SEMA4D-221ENST00000537934 SPON1Q9HCB6 807 aa12.19□□□□□ -0.46
SEMA4D-221ENST00000537934 SEC63Q9UGP8 760 aaKnown RBP12.19□□□□□ -0.46
SEMA4D-221ENST00000537934 FAM196BA6NMK8 535 aa12.18□□□□□ -0.46
SEMA4D-221ENST00000537934 RASGRF2O14827 1237 aa12.18□□□□□ -0.46
SEMA4D-221ENST00000537934 EYA4O95677 639 aa12.18□□□□□ -0.46
SEMA4D-221ENST00000537934 FAM200BP0CF97 657 aa12.18□□□□□ -0.46
SEMA4D-221ENST00000537934 MAGEA10P43363 369 aaPredicted RBP12.18□□□□□ -0.46
SEMA4D-221ENST00000537934 GABPAQ06546 454 aa12.18□□□□□ -0.46
SEMA4D-221ENST00000537934 KCNMA1Q12791 1236 aa12.18□□□□□ -0.46
SEMA4D-221ENST00000537934 LSAMPQ13449 338 aa12.18□□□□□ -0.46
SEMA4D-221ENST00000537934 KCTD19Q17RG1 926 aaPredicted RBP12.18□□□□□ -0.46
SEMA4D-221ENST00000537934 FAM83BQ5T0W9 1011 aa12.18□□□□□ -0.46
SEMA4D-221ENST00000537934 RASIP1Q5U651 963 aa12.18□□□□□ -0.46
SEMA4D-221ENST00000537934 TTC8Q8TAM2 541 aa12.18□□□□□ -0.46
SEMA4D-221ENST00000537934 LRRC8CQ8TDW0 803 aa12.18□□□□□ -0.46
SEMA4D-221ENST00000537934 EPS8L3Q8TE67 593 aaKnown RBP12.18□□□□□ -0.46
SEMA4D-221ENST00000537934 JDP2Q8WYK2 163 aa12.18□□□□□ -0.46
SEMA4D-221ENST00000537934 HAPLN3Q96S86 360 aa12.18□□□□□ -0.46
SEMA4D-221ENST00000537934 ERP44Q9BS26 406 aa12.18□□□□□ -0.46
SEMA4D-221ENST00000537934 CCDC28BQ9BUN5 200 aa12.18□□□□□ -0.46
SEMA4D-221ENST00000537934 SPATA16Q9BXB7 569 aa12.18□□□□□ -0.46
SEMA4D-221ENST00000537934 VPS33BQ9H267 617 aa12.18□□□□□ -0.46
SEMA4D-221ENST00000537934 CUEDC2Q9H467 287 aa12.18□□□□□ -0.46
SEMA4D-221ENST00000537934 NLRC4Q9NPP4 1024 aa12.18□□□□□ -0.46
SEMA4D-221ENST00000537934 hCG_1642624A0A1W2PR95 340 aa12.18□□□□□ -0.46
SEMA4D-221ENST00000537934 DDTLA6NHG4 134 aaPredicted RBP12.18□□□□□ -0.46
SEMA4D-221ENST00000537934 CETN3O15182 167 aa12.18□□□□□ -0.46
SEMA4D-221ENST00000537934 FCER1AP12319 257 aa12.18□□□□□ -0.46
SEMA4D-221ENST00000537934 DRG2P55039 364 aaKnown RBP12.18□□□□□ -0.46
SEMA4D-221ENST00000537934 ZRSR2Q15696 482 aaKnown RBP12.18□□□□□ -0.46
SEMA4D-221ENST00000537934 CATIPQ7Z7H3 387 aa12.18□□□□□ -0.46
SEMA4D-221ENST00000537934 CCSER1Q9C0I3 900 aa12.18□□□□□ -0.46
SEMA4D-221ENST00000537934 MYLK2Q9H1R3 596 aa12.18□□□□□ -0.46
SEMA4D-221ENST00000537934 CARD9Q9H257 536 aa12.18□□□□□ -0.46
SEMA4D-221ENST00000537934 CIDEBQ9UHD4 219 aa12.18□□□□□ -0.46
SEMA4D-221ENST00000537934 ADAMTS1Q9UHI8 967 aa12.18□□□□□ -0.46
SEMA4D-221ENST00000537934 SERPINB13Q9UIV8 391 aa12.18□□□□□ -0.46
SEMA4D-221ENST00000537934 TTC7AQ9ULT0 858 aaPredicted RBP12.18□□□□□ -0.46
SEMA4D-221ENST00000537934 STX8Q9UNK0 236 aa12.18□□□□□ -0.46
SEMA4D-221ENST00000537934 MTMR7Q9Y216 660 aa12.18□□□□□ -0.46
SEMA4D-221ENST00000537934 COMMD3-BMI1R4GMX3 469 aa12.18□□□□□ -0.46
SEMA4D-221ENST00000537934 CLRN2A0PK11 232 aa12.17□□□□□ -0.46
SEMA4D-221ENST00000537934 LGR5O75473 907 aa12.17□□□□□ -0.46
SEMA4D-221ENST00000537934 CCDC166P0CW27 439 aa12.17□□□□□ -0.46
SEMA4D-221ENST00000537934 UBA7P41226 1012 aa12.17□□□□□ -0.46
SEMA4D-221ENST00000537934 KPNB1Q14974 876 aaKnown RBP12.17□□□□□ -0.46
SEMA4D-221ENST00000537934 SETDB1Q15047 1291 aa12.17□□□□□ -0.46
SEMA4D-221ENST00000537934 PPP2R5EQ16537 467 aa12.17□□□□□ -0.46
SEMA4D-221ENST00000537934 CGB2Q6NT52 195 aa12.17□□□□□ -0.46
SEMA4D-221ENST00000537934 CNNM4Q6P4Q7 775 aa12.17□□□□□ -0.46
SEMA4D-221ENST00000537934 DTHD1Q6ZMT9 781 aa12.17□□□□□ -0.46
SEMA4D-221ENST00000537934 ZNF365Q70YC5 407 aa12.17□□□□□ -0.46
SEMA4D-221ENST00000537934 ILDR2Q71H61 639 aa12.17□□□□□ -0.46
SEMA4D-221ENST00000537934 INTS8Q75QN2 995 aaKnown RBP12.17□□□□□ -0.46
SEMA4D-221ENST00000537934 SH3BP5LQ7L8J4 393 aa12.17□□□□□ -0.46
SEMA4D-221ENST00000537934 DAAM2Q86T65 1068 aa12.17□□□□□ -0.46
SEMA4D-221ENST00000537934 VSIG1Q86XK7 387 aa12.17□□□□□ -0.46
SEMA4D-221ENST00000537934 STKLD1Q8NE28 680 aa12.17□□□□□ -0.46
SEMA4D-221ENST00000537934 MGARPQ8TDB4 240 aa12.17□□□□□ -0.46
SEMA4D-221ENST00000537934 C7orf25Q9BPX7 421 aa12.17□□□□□ -0.46
SEMA4D-221ENST00000537934 TBC1D10AQ9BXI6 508 aa12.17□□□□□ -0.46
SEMA4D-221ENST00000537934 TRIM9Q9C026 710 aa12.17□□□□□ -0.46
SEMA4D-221ENST00000537934 FHDC1Q9C0D6 1143 aaPredicted RBP12.17□□□□□ -0.46
SEMA4D-221ENST00000537934 DENND2DQ9H6A0 471 aaPredicted RBP12.17□□□□□ -0.46
SEMA4D-221ENST00000537934 LARSQ9P2J5 1176 aaKnown RBP12.17□□□□□ -0.46
SEMA4D-221ENST00000537934 SUCLA2Q9P2R7 463 aaPredicted RBP12.17□□□□□ -0.46
SEMA4D-221ENST00000537934 DBR1Q9UK59 544 aaKnown RBP12.17□□□□□ -0.46
SEMA4D-221ENST00000537934 RPTORQ8N122 1335 aa12.17□□□□□ -0.46
SEMA4D-221ENST00000537934 MYO3BQ8WXR4 1341 aa12.17□□□□□ -0.46
SEMA4D-221ENST00000537934 SPDYE2BA6NHP3 402 aa12.17□□□□□ -0.46
SEMA4D-221ENST00000537934 NOL4O94818 638 aa12.17□□□□□ -0.46
SEMA4D-221ENST00000537934 PLEKHA8P1O95397 391 aa12.17□□□□□ -0.46
SEMA4D-221ENST00000537934 SPDYE6P0CI01 402 aa12.17□□□□□ -0.46
SEMA4D-221ENST00000537934 DEUP1Q05D60 604 aa12.17□□□□□ -0.46
SEMA4D-221ENST00000537934 MTFR1Q15390 333 aa12.17□□□□□ -0.46
SEMA4D-221ENST00000537934 GSTA3Q16772 222 aa12.17□□□□□ -0.46
SEMA4D-221ENST00000537934 CLEC10AQ8IUN9 316 aa12.17□□□□□ -0.46
SEMA4D-221ENST00000537934 OGFOD1Q8N543 542 aa12.17□□□□□ -0.46
SEMA4D-221ENST00000537934 SCG3Q8WXD2 468 aaKnown RBP12.17□□□□□ -0.46
SEMA4D-221ENST00000537934 IDI2Q9BXS1 227 aa12.17□□□□□ -0.46
SEMA4D-221ENST00000537934 ROPN1BQ9BZX4 212 aaPredicted RBP12.17□□□□□ -0.46
SEMA4D-221ENST00000537934 ROPN1Q9HAT0 212 aaPredicted RBP12.17□□□□□ -0.46
SEMA4D-221ENST00000537934 ZNF287Q9HBT7 754 aa12.17□□□□□ -0.46
SEMA4D-221ENST00000537934 STXBP5LQ9Y2K9 1186 aa12.17□□□□□ -0.46
SEMA4D-221ENST00000537934 DAAM1Q9Y4D1 1078 aa12.17□□□□□ -0.46
SEMA4D-221ENST00000537934 TMEM120BA0PK00 339 aa12.17□□□□□ -0.46
SEMA4D-221ENST00000537934 PALM3A6NDB9 673 aaPredicted RBP12.17□□□□□ -0.46
SEMA4D-221ENST00000537934 FAM187AA6NFU0 413 aa12.17□□□□□ -0.46
SEMA4D-221ENST00000537934 HGSO14964 777 aaPredicted RBP12.17□□□□□ -0.46
SEMA4D-221ENST00000537934 ENTPD5O75356 428 aa12.17□□□□□ -0.46
SEMA4D-221ENST00000537934 SLCO1A2P46721 670 aa12.17□□□□□ -0.46
SEMA4D-221ENST00000537934 RASSF2P50749 326 aa12.17□□□□□ -0.46
SEMA4D-221ENST00000537934 PLTPP55058 493 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms