RNA–Protein interactions for RNA: ENST00000537533.1

PTPN6-209, Transcript of protein tyrosine phosphatase, non-receptor type 6, human

TSL 3

Gene PTPN6, Length 673 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN6-209	ENST00000537533	FAM173B	Q6P4H8	233 aa		13.78	□□□□□ -0.2
PTPN6-209	ENST00000537533	URGCP	Q8TCY9	931 aa		13.78	□□□□□ -0.2
PTPN6-209	ENST00000537533	PPP2R3C	Q969Q6	453 aa		13.78	□□□□□ -0.2
PTPN6-209	ENST00000537533	NTPCR	Q9BSD7	190 aa	Known RBP	13.78	□□□□□ -0.2
PTPN6-209	ENST00000537533	KIFC3	Q9BVG8	833 aa		13.78	□□□□□ -0.2
PTPN6-209	ENST00000537533	RNF39	Q9H2S5	420 aa		13.78	□□□□□ -0.2
PTPN6-209	ENST00000537533	TMEM134	Q9H6X4	195 aa		13.78	□□□□□ -0.2
PTPN6-209	ENST00000537533	PUF60	Q9UHX1	559 aa	Known RBP	13.78	□□□□□ -0.2
PTPN6-209	ENST00000537533	KCNG1	Q9UIX4	513 aa		13.78	□□□□□ -0.2
PTPN6-209	ENST00000537533	FBXO2	Q9UK22	296 aa	Predicted RBP	13.78	□□□□□ -0.2
PTPN6-209	ENST00000537533	INPP5F	Q9Y2H2	1132 aa		13.78	□□□□□ -0.2
PTPN6-209	ENST00000537533	GIT1	Q9Y2X7	761 aa		13.78	□□□□□ -0.2
PTPN6-209	ENST00000537533	SRPRB	Q9Y5M8	271 aa	Known RBP	13.78	□□□□□ -0.2
PTPN6-209	ENST00000537533	TTLL13P	A6NNM8	815 aa		13.77	□□□□□ -0.21
PTPN6-209	ENST00000537533	N4BP3	O15049	544 aa		13.77	□□□□□ -0.21
PTPN6-209	ENST00000537533	EDN1	P05305	212 aa		13.77	□□□□□ -0.21
PTPN6-209	ENST00000537533	GALT	P07902	379 aa		13.77	□□□□□ -0.21
PTPN6-209	ENST00000537533	PBX3	P40426	434 aa		13.77	□□□□□ -0.21
PTPN6-209	ENST00000537533	NPTX2	P47972	431 aa		13.77	□□□□□ -0.21
PTPN6-209	ENST00000537533	AFF1	P51825	1210 aa	Known RBP	13.77	□□□□□ -0.21
PTPN6-209	ENST00000537533	PEX3	P56589	373 aa		13.77	□□□□□ -0.21
PTPN6-209	ENST00000537533	ERVFC1	P60507	584 aa		13.77	□□□□□ -0.21
PTPN6-209	ENST00000537533	DMP1	Q13316	513 aa	Predicted RBP	13.77	□□□□□ -0.21
PTPN6-209	ENST00000537533	SLC39A14	Q15043	492 aa		13.77	□□□□□ -0.21
PTPN6-209	ENST00000537533	PHLPP2	Q6ZVD8	1323 aa		13.77	□□□□□ -0.21
PTPN6-209	ENST00000537533	ZNF280B	Q86YH2	543 aa		13.77	□□□□□ -0.21
PTPN6-209	ENST00000537533	HACE1	Q8IYU2	909 aa		13.77	□□□□□ -0.21
PTPN6-209	ENST00000537533	LRRC15	Q8TF66	581 aa		13.77	□□□□□ -0.21
PTPN6-209	ENST00000537533	KCNN1	Q92952	543 aa		13.77	□□□□□ -0.21
PTPN6-209	ENST00000537533	USP28	Q96RU2	1077 aa		13.77	□□□□□ -0.21
PTPN6-209	ENST00000537533	PLIN2	Q99541	437 aa		13.77	□□□□□ -0.21
PTPN6-209	ENST00000537533	TMEM175	Q9BSA9	504 aa		13.77	□□□□□ -0.21
PTPN6-209	ENST00000537533	TRIM6	Q9C030	488 aa	Predicted RBP	13.77	□□□□□ -0.21
PTPN6-209	ENST00000537533	NXF3	Q9H4D5	531 aa	Known RBP	13.77	□□□□□ -0.21
PTPN6-209	ENST00000537533	PDZD7	Q9H5P4	517 aa		13.77	□□□□□ -0.21
PTPN6-209	ENST00000537533	BLOC1S4	Q9NUP1	217 aa		13.77	□□□□□ -0.21
PTPN6-209	ENST00000537533	ARHGAP28	Q9P2N2	729 aa		13.77	□□□□□ -0.21
PTPN6-209	ENST00000537533	RBM19	Q9Y4C8	960 aa	Known RBP	13.77	□□□□□ -0.21
PTPN6-209	ENST00000537533	HES2	Q9Y543	173 aa		13.77	□□□□□ -0.21
PTPN6-209	ENST00000537533	CIT	O14578	2027 aa		13.76	□□□□□ -0.21
PTPN6-209	ENST00000537533	ARL5C	A6NH57	179 aa		13.76	□□□□□ -0.21
PTPN6-209	ENST00000537533		K7ERI5	159 aa		13.76	□□□□□ -0.21
PTPN6-209	ENST00000537533	B4GALT3	O60512	393 aa		13.76	□□□□□ -0.21
PTPN6-209	ENST00000537533	ZC3H11A	O75152	810 aa	Known RBP eCLIP	13.76	□□□□□ -0.21
PTPN6-209	ENST00000537533	DDHD2	O94830	711 aa		13.76	□□□□□ -0.21
PTPN6-209	ENST00000537533	NPTXR	O95502	500 aa		13.76	□□□□□ -0.21
PTPN6-209	ENST00000537533	PLCG1	P19174	1290 aa		13.76	□□□□□ -0.21
PTPN6-209	ENST00000537533	MARCKS	P29966	332 aa	Predicted RBP	13.76	□□□□□ -0.21
PTPN6-209	ENST00000537533	LTBR	P36941	435 aa		13.76	□□□□□ -0.21
PTPN6-209	ENST00000537533	NASP	P49321	788 aa	Predicted RBP	13.76	□□□□□ -0.21
PTPN6-209	ENST00000537533	KCNQ1	P51787	676 aa		13.76	□□□□□ -0.21
PTPN6-209	ENST00000537533	RNASEL	Q05823	741 aa	Known RBP	13.76	□□□□□ -0.21
PTPN6-209	ENST00000537533	KARS	Q15046	597 aa	Known RBP	13.76	□□□□□ -0.21
PTPN6-209	ENST00000537533	ARSH	Q5FYA8	562 aa		13.76	□□□□□ -0.21
PTPN6-209	ENST00000537533	NT5DC1	Q5TFE4	455 aa		13.76	□□□□□ -0.21
PTPN6-209	ENST00000537533	ADGRD2	Q7Z7M1	963 aa		13.76	□□□□□ -0.21
PTPN6-209	ENST00000537533	CDR2L	Q86X02	465 aa	Predicted RBP	13.76	□□□□□ -0.21
PTPN6-209	ENST00000537533	GSTCD	Q8NEC7	633 aa		13.76	□□□□□ -0.21
PTPN6-209	ENST00000537533	SPIRE2	Q8WWL2	714 aa		13.76	□□□□□ -0.21
PTPN6-209	ENST00000537533	IGSF21	Q96ID5	467 aa		13.76	□□□□□ -0.21
PTPN6-209	ENST00000537533	GAD1	Q99259	594 aa		13.76	□□□□□ -0.21
PTPN6-209	ENST00000537533	NGRN	Q9NPE2	291 aa	Known RBP	13.76	□□□□□ -0.21
PTPN6-209	ENST00000537533	DNAJB4	Q9UDY4	337 aa		13.76	□□□□□ -0.21
PTPN6-209	ENST00000537533	FSD2	A1L4K1	749 aa		13.75	□□□□□ -0.21
PTPN6-209	ENST00000537533	CCDC169	A6NNP5	214 aa		13.75	□□□□□ -0.21
PTPN6-209	ENST00000537533	NT5C1B-RDH14	C9J2C7	533 aa		13.75	□□□□□ -0.21
PTPN6-209	ENST00000537533	SSB	P05455	408 aa	Known RBP eCLIP	13.75	□□□□□ -0.21
PTPN6-209	ENST00000537533	PLS3	P13797	630 aa		13.75	□□□□□ -0.21
PTPN6-209	ENST00000537533	KCNA5	P22460	613 aa		13.75	□□□□□ -0.21
PTPN6-209	ENST00000537533	GTF2F1	P35269	517 aa	Known RBP eCLIP	13.75	□□□□□ -0.21
PTPN6-209	ENST00000537533	MLH1	P40692	756 aa		13.75	□□□□□ -0.21
PTPN6-209	ENST00000537533	SLC11A1	P49279	550 aa		13.75	□□□□□ -0.21
PTPN6-209	ENST00000537533	DSC1	Q08554	894 aa		13.75	□□□□□ -0.21
PTPN6-209	ENST00000537533	ADAM15	Q13444	863 aa		13.75	□□□□□ -0.21
PTPN6-209	ENST00000537533	PUS10	Q3MIT2	529 aa	Known RBP	13.75	□□□□□ -0.21
PTPN6-209	ENST00000537533	USP49	Q70CQ1	688 aa		13.75	□□□□□ -0.21
PTPN6-209	ENST00000537533	TAS1R3	Q7RTX0	852 aa		13.75	□□□□□ -0.21
PTPN6-209	ENST00000537533	DDX53	Q86TM3	631 aa	Known RBP	13.75	□□□□□ -0.21
PTPN6-209	ENST00000537533	TMEM173	Q86WV6	379 aa	Predicted RBP	13.75	□□□□□ -0.21
PTPN6-209	ENST00000537533	COLGALT2	Q8IYK4	626 aa		13.75	□□□□□ -0.21
PTPN6-209	ENST00000537533	EFHB	Q8N7U6	833 aa		13.75	□□□□□ -0.21
PTPN6-209	ENST00000537533	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	13.75	□□□□□ -0.21
PTPN6-209	ENST00000537533	MICAL1	Q8TDZ2	1067 aa		13.75	□□□□□ -0.21
PTPN6-209	ENST00000537533	ADAMTS19	Q8TE59	1207 aa		13.75	□□□□□ -0.21
PTPN6-209	ENST00000537533	RAD54L	Q92698	747 aa		13.75	□□□□□ -0.21
PTPN6-209	ENST00000537533	TMEM169	Q96HH4	297 aa		13.75	□□□□□ -0.21
PTPN6-209	ENST00000537533	EPSTI1	Q96J88	318 aa		13.75	□□□□□ -0.21
PTPN6-209	ENST00000537533	CDCA3	Q99618	268 aa	Predicted RBP	13.75	□□□□□ -0.21
PTPN6-209	ENST00000537533	KMT5A	Q9NQR1	393 aa		13.75	□□□□□ -0.21
PTPN6-209	ENST00000537533	MIOS	Q9NXC5	875 aa		13.75	□□□□□ -0.21
PTPN6-209	ENST00000537533	CLDND1	Q9NY35	253 aa		13.75	□□□□□ -0.21
PTPN6-209	ENST00000537533	STK39	Q9UEW8	545 aa		13.75	□□□□□ -0.21
PTPN6-209	ENST00000537533	ODF2L	Q9ULJ1	636 aa		13.75	□□□□□ -0.21
PTPN6-209	ENST00000537533	TNFSF13B	Q9Y275	285 aa		13.75	□□□□□ -0.21
PTPN6-209	ENST00000537533	PCDHGC5	Q9Y5F6	944 aa		13.75	□□□□□ -0.21
PTPN6-209	ENST00000537533	SFI1	A8K8P3	1242 aa		13.74	□□□□□ -0.21
PTPN6-209	ENST00000537533	CSPG5	O95196	566 aa		13.74	□□□□□ -0.21
PTPN6-209	ENST00000537533	POMC	P01189	267 aa		13.74	□□□□□ -0.21
PTPN6-209	ENST00000537533	ALDH2	P05091	517 aa		13.74	□□□□□ -0.21
PTPN6-209	ENST00000537533	HSP90AA1	P07900	732 aa	Known RBP	13.74	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 47 ms