RNA–Protein interactions for RNA: ENST00000537230.2

TRIM25-202, Transcript of tripartite motif containing 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM25, Length 2,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-202ENST00000537230 SUCLA2Q9P2R7 463 aaPredicted RBP13.9□□□□□ -0.18
TRIM25-202ENST00000537230 AMACRQ9UHK6 382 aa13.9□□□□□ -0.18
TRIM25-202ENST00000537230 INTUQ9ULD6 942 aa13.9□□□□□ -0.18
TRIM25-202ENST00000537230 PLAAQ9Y263 795 aa13.9□□□□□ -0.18
TRIM25-202ENST00000537230 GJA3Q9Y6H8 435 aa13.9□□□□□ -0.18
TRIM25-202ENST00000537230 CCDC169A6NNP5 214 aa13.9□□□□□ -0.18
TRIM25-202ENST00000537230 A6NNZ2 444 aa13.9□□□□□ -0.18
TRIM25-202ENST00000537230 PGRMC1O00264 195 aaKnown RBP13.9□□□□□ -0.18
TRIM25-202ENST00000537230 ZNF862O60290 1169 aa13.9□□□□□ -0.18
TRIM25-202ENST00000537230 RGS20O76081 388 aa13.9□□□□□ -0.18
TRIM25-202ENST00000537230 LYPLA2O95372 231 aa13.9□□□□□ -0.18
TRIM25-202ENST00000537230 MYCNP04198 464 aaPredicted RBP13.9□□□□□ -0.18
TRIM25-202ENST00000537230 TMEM253P0C7T8 217 aa13.9□□□□□ -0.18
TRIM25-202ENST00000537230 TNFAIP3P21580 790 aa13.9□□□□□ -0.18
TRIM25-202ENST00000537230 USP8P40818 1118 aa13.9□□□□□ -0.18
TRIM25-202ENST00000537230 FNTAP49354 379 aa13.9□□□□□ -0.18
TRIM25-202ENST00000537230 MAP2K1Q02750 393 aaPredicted RBP13.9□□□□□ -0.18
TRIM25-202ENST00000537230 KIF22Q14807 665 aa13.9□□□□□ -0.18
TRIM25-202ENST00000537230 PTGISQ16647 500 aa13.9□□□□□ -0.18
TRIM25-202ENST00000537230 TUBB8Q3ZCM7 444 aa13.9□□□□□ -0.18
TRIM25-202ENST00000537230 C4orf19Q8IY42 314 aa13.9□□□□□ -0.18
TRIM25-202ENST00000537230 MREGQ8N565 214 aa13.9□□□□□ -0.18
TRIM25-202ENST00000537230 SEMA4DQ92854 862 aa13.9□□□□□ -0.18
TRIM25-202ENST00000537230 PBKQ96KB5 322 aa13.9□□□□□ -0.18
TRIM25-202ENST00000537230 CELF4Q9BZC1 486 aaKnown RBP13.9□□□□□ -0.18
TRIM25-202ENST00000537230 VPS33BQ9H267 617 aa13.9□□□□□ -0.18
TRIM25-202ENST00000537230 RNF146Q9NTX7 359 aa13.9□□□□□ -0.18
TRIM25-202ENST00000537230 NCANO14594 1321 aa13.89□□□□□ -0.19
TRIM25-202ENST00000537230 PFASO15067 1338 aa13.89□□□□□ -0.19
TRIM25-202ENST00000537230 KRIT1O00522 736 aa13.89□□□□□ -0.19
TRIM25-202ENST00000537230 CES2O00748 559 aa13.89□□□□□ -0.19
TRIM25-202ENST00000537230 NPTX2P47972 431 aa13.89□□□□□ -0.19
TRIM25-202ENST00000537230 PSMC5P62195 406 aa13.89□□□□□ -0.19
TRIM25-202ENST00000537230 TNNC1P63316 161 aa13.89□□□□□ -0.19
TRIM25-202ENST00000537230 AADACL2Q6P093 401 aa13.89□□□□□ -0.19
TRIM25-202ENST00000537230 CNPY4Q8N129 248 aa13.89□□□□□ -0.19
TRIM25-202ENST00000537230 TMEM161BQ8NDZ6 487 aa13.89□□□□□ -0.19
TRIM25-202ENST00000537230 CTNNBL1Q8WYA6 563 aaPredicted RBP13.89□□□□□ -0.19
TRIM25-202ENST00000537230 CCT8L2Q96SF2 557 aa13.89□□□□□ -0.19
TRIM25-202ENST00000537230 AGPAT1Q99943 283 aa13.89□□□□□ -0.19
TRIM25-202ENST00000537230 USP20Q9Y2K6 914 aa13.89□□□□□ -0.19
TRIM25-202ENST00000537230 ADGRA3Q8IWK6 1321 aa13.89□□□□□ -0.19
TRIM25-202ENST00000537230 ATMINO43313 823 aaPredicted RBP13.89□□□□□ -0.19
TRIM25-202ENST00000537230 SGPL1O95470 568 aa13.89□□□□□ -0.19
TRIM25-202ENST00000537230 MDH1P40925 334 aaKnown RBP13.89□□□□□ -0.19
TRIM25-202ENST00000537230 HMGCS2P54868 508 aa13.89□□□□□ -0.19
TRIM25-202ENST00000537230 ZNF211Q13398 564 aaPredicted RBP13.89□□□□□ -0.19
TRIM25-202ENST00000537230 DALRD3Q5D0E6 543 aaKnown RBP13.89□□□□□ -0.19
TRIM25-202ENST00000537230 MYCBPAPQ8TBZ2 947 aa13.89□□□□□ -0.19
TRIM25-202ENST00000537230 KREMEN1Q96MU8 473 aa13.89□□□□□ -0.19
TRIM25-202ENST00000537230 PCDHB18PQ96TA0 734 aa13.89□□□□□ -0.19
TRIM25-202ENST00000537230 WDR64B1ANS9 1081 aa13.88□□□□□ -0.19
TRIM25-202ENST00000537230 DDX3YO15523 660 aaKnown RBP13.88□□□□□ -0.19
TRIM25-202ENST00000537230 PEX10O60683 326 aa13.88□□□□□ -0.19
TRIM25-202ENST00000537230 FGGP02679 453 aa13.88□□□□□ -0.19
TRIM25-202ENST00000537230 NCKAP1LP55160 1127 aa13.88□□□□□ -0.19
TRIM25-202ENST00000537230 SF3B2Q13435 895 aaKnown RBP13.88□□□□□ -0.19
TRIM25-202ENST00000537230 TNFAIP1Q13829 316 aa13.88□□□□□ -0.19
TRIM25-202ENST00000537230 SNRNP35Q16560 246 aaKnown RBP13.88□□□□□ -0.19
TRIM25-202ENST00000537230 RNF187Q5TA31 235 aaPredicted RBP13.88□□□□□ -0.19
TRIM25-202ENST00000537230 SLC39A4Q6P5W5 647 aa13.88□□□□□ -0.19
TRIM25-202ENST00000537230 NLRP14Q86W24 1093 aa13.88□□□□□ -0.19
TRIM25-202ENST00000537230 CPNE8Q86YQ8 564 aa13.88□□□□□ -0.19
TRIM25-202ENST00000537230 CD302Q8IX05 232 aa13.88□□□□□ -0.19
TRIM25-202ENST00000537230 WHAMMQ8TF30 809 aa13.88□□□□□ -0.19
TRIM25-202ENST00000537230 ALG3Q92685 438 aa13.88□□□□□ -0.19
TRIM25-202ENST00000537230 CEP89Q96ST8 783 aa13.88□□□□□ -0.19
TRIM25-202ENST00000537230 PPANQ9NQ55 473 aaKnown RBP13.88□□□□□ -0.19
TRIM25-202ENST00000537230 CTDP1Q9Y5B0 961 aaPredicted RBP13.88□□□□□ -0.19
TRIM25-202ENST00000537230 E7EVH7 732 aa13.88□□□□□ -0.19
TRIM25-202ENST00000537230 ZBED4O75132 1171 aa13.88□□□□□ -0.19
TRIM25-202ENST00000537230 CALCAP01258 141 aa13.88□□□□□ -0.19
TRIM25-202ENST00000537230 NR3C2P08235 984 aa13.88□□□□□ -0.19
TRIM25-202ENST00000537230 MAPTP10636 758 aaKnown RBP13.88□□□□□ -0.19
TRIM25-202ENST00000537230 CNGA1P29973 690 aa13.88□□□□□ -0.19
TRIM25-202ENST00000537230 FLT3P36888 993 aa13.88□□□□□ -0.19
TRIM25-202ENST00000537230 MARCKSL1P49006 195 aa13.88□□□□□ -0.19
TRIM25-202ENST00000537230 MXI1P50539 228 aa13.88□□□□□ -0.19
TRIM25-202ENST00000537230 MYBPC2Q14324 1141 aa13.88□□□□□ -0.19
TRIM25-202ENST00000537230 SWT1Q5T5J6 900 aaKnown RBP13.88□□□□□ -0.19
TRIM25-202ENST00000537230 SNRNP48Q6IEG0 339 aaKnown RBP13.88□□□□□ -0.19
TRIM25-202ENST00000537230 VSIG10LQ86VR7 867 aa13.88□□□□□ -0.19
TRIM25-202ENST00000537230 C12orf56Q8IXR9 622 aa13.88□□□□□ -0.19
TRIM25-202ENST00000537230 RASGEF1CQ8N431 466 aa13.88□□□□□ -0.19
TRIM25-202ENST00000537230 TMOD4Q9NZQ9 345 aa13.88□□□□□ -0.19
TRIM25-202ENST00000537230 BCCIPQ9P287 314 aaKnown RBP eCLIP13.88□□□□□ -0.19
TRIM25-202ENST00000537230 CNOT7Q9UIV1 285 aaKnown RBP13.88□□□□□ -0.19
TRIM25-202ENST00000537230 TBX20Q9UMR3 447 aa13.88□□□□□ -0.19
TRIM25-202ENST00000537230 DENND3A2RUS2 1198 aa13.87□□□□□ -0.19
TRIM25-202ENST00000537230 TTI1O43156 1089 aa13.87□□□□□ -0.19
TRIM25-202ENST00000537230 FTLP02792 175 aaPredicted RBP13.87□□□□□ -0.19
TRIM25-202ENST00000537230 BACE1P56817 501 aa13.87□□□□□ -0.19
TRIM25-202ENST00000537230 IFT88Q13099 833 aa13.87□□□□□ -0.19
TRIM25-202ENST00000537230 PRPF4BQ13523 1007 aaKnown RBP13.87□□□□□ -0.19
TRIM25-202ENST00000537230 NOP9Q86U38 636 aaKnown RBP13.87□□□□□ -0.19
TRIM25-202ENST00000537230 SLC47A2Q86VL8 602 aa13.87□□□□□ -0.19
TRIM25-202ENST00000537230 RPUSD2Q8IZ73 545 aaKnown RBP13.87□□□□□ -0.19
TRIM25-202ENST00000537230 PPM1KQ8N3J5 372 aa13.87□□□□□ -0.19
TRIM25-202ENST00000537230 LMBR1Q8WVP7 490 aa13.87□□□□□ -0.19
TRIM25-202ENST00000537230 WRNIP1Q96S55 665 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms