RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 ERICH6BQ5W0A0 696 aa7.47□□□□□ -1.21
CLIP1-207ENST00000536634 TRIM68Q6AZZ1 485 aa7.47□□□□□ -1.21
CLIP1-207ENST00000536634 FILIP1Q7Z7B0 1213 aa7.47□□□□□ -1.21
CLIP1-207ENST00000536634 RNF180Q86T96 592 aa7.47□□□□□ -1.21
CLIP1-207ENST00000536634 OR2W6PQ8NHA6 318 aa7.47□□□□□ -1.21
CLIP1-207ENST00000536634 MS4A5Q9H3V2 200 aa7.47□□□□□ -1.21
CLIP1-207ENST00000536634 SPON1Q9HCB6 807 aa7.47□□□□□ -1.21
CLIP1-207ENST00000536634 MAPRE3Q9UPY8 281 aa7.47□□□□□ -1.21
CLIP1-207ENST00000536634 SPATA31E1Q6ZUB1 1445 aa7.46□□□□□ -1.21
CLIP1-207ENST00000536634 LCHNA4D1U4 455 aa7.46□□□□□ -1.22
CLIP1-207ENST00000536634 GPR42O15529 346 aa7.46□□□□□ -1.22
CLIP1-207ENST00000536634 IL2P60568 153 aa7.46□□□□□ -1.22
CLIP1-207ENST00000536634 PCOLCEQ15113 449 aa7.46□□□□□ -1.22
CLIP1-207ENST00000536634 UBR7Q8N806 425 aa7.46□□□□□ -1.22
CLIP1-207ENST00000536634 OR5AN1Q8NGI8 311 aa7.46□□□□□ -1.22
CLIP1-207ENST00000536634 KRTAP9-3Q9BYQ3 159 aa7.46□□□□□ -1.22
CLIP1-207ENST00000536634 SEMA4AQ9H3S1 761 aa7.46□□□□□ -1.22
CLIP1-207ENST00000536634 POFUT1Q9H488 388 aa7.46□□□□□ -1.22
CLIP1-207ENST00000536634 PHRF1Q9P1Y6 1649 aaKnown RBP7.45□□□□□ -1.22
CLIP1-207ENST00000536634 CHD4Q14839 1912 aa7.45□□□□□ -1.22
CLIP1-207ENST00000536634 NPEPPSL1A6NEC2 478 aa7.45□□□□□ -1.22
CLIP1-207ENST00000536634 FKBP9O95302 570 aa7.45□□□□□ -1.22
CLIP1-207ENST00000536634 LSSP48449 732 aa7.45□□□□□ -1.22
CLIP1-207ENST00000536634 MRE11P49959 708 aa7.45□□□□□ -1.22
CLIP1-207ENST00000536634 ANTXR2P58335 489 aa7.45□□□□□ -1.22
CLIP1-207ENST00000536634 C1QTNF8P60827 252 aa7.45□□□□□ -1.22
CLIP1-207ENST00000536634 EFEMP1Q12805 493 aa7.45□□□□□ -1.22
CLIP1-207ENST00000536634 SAFB2Q14151 953 aaKnown RBP eCLIP7.45□□□□□ -1.22
CLIP1-207ENST00000536634 SART3Q15020 963 aaKnown RBP7.45□□□□□ -1.22
CLIP1-207ENST00000536634 NBPF8Q3BBV2 869 aa7.45□□□□□ -1.22
CLIP1-207ENST00000536634 AGBL4Q5VU57 503 aa7.45□□□□□ -1.22
CLIP1-207ENST00000536634 SLFN13Q68D06 897 aa7.45□□□□□ -1.22
CLIP1-207ENST00000536634 GLB1LQ6UWU2 654 aa7.45□□□□□ -1.22
CLIP1-207ENST00000536634 FKBP9P1Q75LS8 142 aa7.45□□□□□ -1.22
CLIP1-207ENST00000536634 NME9Q86XW9 330 aa7.45□□□□□ -1.22
CLIP1-207ENST00000536634 RTKN2Q8IZC4 609 aa7.45□□□□□ -1.22
CLIP1-207ENST00000536634 SCYL1Q96KG9 808 aa7.45□□□□□ -1.22
CLIP1-207ENST00000536634 MYL10Q9BUA6 226 aa7.45□□□□□ -1.22
CLIP1-207ENST00000536634 SLKQ9H2G2 1235 aaPredicted RBP7.45□□□□□ -1.22
CLIP1-207ENST00000536634 KIAA0232Q92628 1395 aa7.45□□□□□ -1.22
CLIP1-207ENST00000536634 ANKARQ7Z5J8 1434 aa7.44□□□□□ -1.22
CLIP1-207ENST00000536634 MATN2O00339 956 aa7.44□□□□□ -1.22
CLIP1-207ENST00000536634 ADCY1Q08828 1119 aa7.44□□□□□ -1.22
CLIP1-207ENST00000536634 TAF7LQ5H9L4 462 aa7.44□□□□□ -1.22
CLIP1-207ENST00000536634 UNQ6494/PRO21346Q6UXR6 183 aa7.44□□□□□ -1.22
CLIP1-207ENST00000536634 STRA8Q7Z7C7 330 aa7.44□□□□□ -1.22
CLIP1-207ENST00000536634 PHYKPLQ8IUZ5 450 aa7.44□□□□□ -1.22
CLIP1-207ENST00000536634 C7orf31Q8N865 590 aa7.44□□□□□ -1.22
CLIP1-207ENST00000536634 NEIL1Q96FI4 390 aaPredicted RBP7.44□□□□□ -1.22
CLIP1-207ENST00000536634 GNRHR2Q96P88 292 aa7.44□□□□□ -1.22
CLIP1-207ENST00000536634 LRRC37BQ96QE4 947 aa7.44□□□□□ -1.22
CLIP1-207ENST00000536634 LMF1Q96S06 567 aa7.44□□□□□ -1.22
CLIP1-207ENST00000536634 SEC61A2Q9H9S3 476 aa7.44□□□□□ -1.22
CLIP1-207ENST00000536634 PRDM11Q9NQV5 511 aa7.44□□□□□ -1.22
CLIP1-207ENST00000536634 PEAK1Q9H792 1746 aa7.44□□□□□ -1.22
CLIP1-207ENST00000536634 RGPD3A6NKT7 1758 aaPredicted RBP7.43□□□□□ -1.22
CLIP1-207ENST00000536634 RGPD4Q7Z3J3 1758 aa7.43□□□□□ -1.22
CLIP1-207ENST00000536634 PRPF6O94906 941 aaKnown RBP7.43□□□□□ -1.22
CLIP1-207ENST00000536634 APOL3O95236 402 aa7.43□□□□□ -1.22
CLIP1-207ENST00000536634 CD40P25942 277 aa7.43□□□□□ -1.22
CLIP1-207ENST00000536634 MASP1P48740 699 aa7.43□□□□□ -1.22
CLIP1-207ENST00000536634 MEOX1P50221 254 aa7.43□□□□□ -1.22
CLIP1-207ENST00000536634 KRTAP10-2P60368 255 aa7.43□□□□□ -1.22
CLIP1-207ENST00000536634 MAP3K12Q12852 859 aa7.43□□□□□ -1.22
CLIP1-207ENST00000536634 LRRC32Q14392 662 aa7.43□□□□□ -1.22
CLIP1-207ENST00000536634 ZNF568Q3ZCX4 644 aa7.43□□□□□ -1.22
CLIP1-207ENST00000536634 ZMAT1Q5H9K5 638 aa7.43□□□□□ -1.22
CLIP1-207ENST00000536634 KANSL1Q7Z3B3 1105 aa7.43□□□□□ -1.22
CLIP1-207ENST00000536634 PASD1Q8IV76 773 aa7.43□□□□□ -1.22
CLIP1-207ENST00000536634 ZZZ3Q8IYH5 903 aa7.43□□□□□ -1.22
CLIP1-207ENST00000536634 CFHR4Q92496 578 aa7.43□□□□□ -1.22
CLIP1-207ENST00000536634 LOXL4Q96JB6 756 aa7.43□□□□□ -1.22
CLIP1-207ENST00000536634 PRAM1Q96QH2 718 aa7.43□□□□□ -1.22
CLIP1-207ENST00000536634 EMC7Q9NPA0 242 aa7.43□□□□□ -1.22
CLIP1-207ENST00000536634 CNOT11Q9UKZ1 510 aaKnown RBP7.43□□□□□ -1.22
CLIP1-207ENST00000536634 NR2E1Q9Y466 385 aa7.43□□□□□ -1.22
CLIP1-207ENST00000536634 ANKRD30BQ9BXX2 1392 aa7.43□□□□□ -1.22
CLIP1-207ENST00000536634 SBF2Q86WG5 1849 aa7.43□□□□□ -1.22
CLIP1-207ENST00000536634 SSH2Q76I76 1423 aa7.43□□□□□ -1.22
CLIP1-207ENST00000536634 PARP4Q9UKK3 1724 aaKnown RBP7.42□□□□□ -1.22
CLIP1-207ENST00000536634 ELL2O00472 640 aaPredicted RBP7.42□□□□□ -1.22
CLIP1-207ENST00000536634 BPIP17213 487 aa7.42□□□□□ -1.22
CLIP1-207ENST00000536634 STAT3P40763 770 aa7.42□□□□□ -1.22
CLIP1-207ENST00000536634 ID4P47928 161 aa7.42□□□□□ -1.22
CLIP1-207ENST00000536634 ADCY2Q08462 1091 aa7.42□□□□□ -1.22
CLIP1-207ENST00000536634 NFYCQ13952 458 aa7.42□□□□□ -1.22
CLIP1-207ENST00000536634 ICAM4Q14773 271 aa7.42□□□□□ -1.22
CLIP1-207ENST00000536634 DHCR24Q15392 516 aa7.42□□□□□ -1.22
CLIP1-207ENST00000536634 TERF2Q15554 542 aa7.42□□□□□ -1.22
CLIP1-207ENST00000536634 USP30Q70CQ3 517 aa7.42□□□□□ -1.22
CLIP1-207ENST00000536634 PRRT2Q7Z6L0 340 aaPredicted RBP7.42□□□□□ -1.22
CLIP1-207ENST00000536634 CIR1Q86X95 450 aaPredicted RBP7.42□□□□□ -1.22
CLIP1-207ENST00000536634 ZNF496Q96IT1 587 aaPredicted RBP7.42□□□□□ -1.22
CLIP1-207ENST00000536634 DPYSL5Q9BPU6 564 aa7.42□□□□□ -1.22
CLIP1-207ENST00000536634 OR10A2Q9H208 303 aa7.42□□□□□ -1.22
CLIP1-207ENST00000536634 ST6GALNAC2Q9UJ37 374 aa7.42□□□□□ -1.22
CLIP1-207ENST00000536634 FAM184BQ9ULE4 1060 aa7.42□□□□□ -1.22
CLIP1-207ENST00000536634 LMO7Q8WWI1 1683 aa7.41□□□□□ -1.22
CLIP1-207ENST00000536634 NEMP1O14524 444 aa7.41□□□□□ -1.22
CLIP1-207ENST00000536634 ARHGAP6O43182 974 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms