RNA–Protein interactions for RNA: ENST00000536548.5

CPSF7-216, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-216ENST00000536548 ITGB8P26012 769 aa8.4□□□□□ -1.06
CPSF7-216ENST00000536548 TMOD1P28289 359 aa8.4□□□□□ -1.06
CPSF7-216ENST00000536548 PRKCIP41743 596 aa8.4□□□□□ -1.06
CPSF7-216ENST00000536548 GYG1P46976 350 aa8.4□□□□□ -1.06
CPSF7-216ENST00000536548 DNA2P51530 1060 aa8.4□□□□□ -1.06
CPSF7-216ENST00000536548 DHX9Q08211 1270 aaKnown RBP8.4□□□□□ -1.06
CPSF7-216ENST00000536548 ADCY2Q08462 1091 aa8.4□□□□□ -1.06
CPSF7-216ENST00000536548 TCP10Q12799 353 aa8.4□□□□□ -1.06
CPSF7-216ENST00000536548 DHX34Q14147 1143 aaKnown RBP8.4□□□□□ -1.06
CPSF7-216ENST00000536548 CCL14Q16627 93 aa8.4□□□□□ -1.06
CPSF7-216ENST00000536548 QPCTQ16769 361 aa8.4□□□□□ -1.06
CPSF7-216ENST00000536548 FAM110CQ1W6H9 321 aa8.4□□□□□ -1.06
CPSF7-216ENST00000536548 EDRF1Q3B7T1 1238 aa8.4□□□□□ -1.06
CPSF7-216ENST00000536548 TMEM119Q4V9L6 283 aa8.4□□□□□ -1.06
CPSF7-216ENST00000536548 ZCWPW2Q504Y3 356 aa8.4□□□□□ -1.06
CPSF7-216ENST00000536548 FAM26FQ5R3K3 315 aa8.4□□□□□ -1.06
CPSF7-216ENST00000536548 NOL9Q5SY16 702 aaKnown RBP8.4□□□□□ -1.06
CPSF7-216ENST00000536548 C6orf118Q5T5N4 469 aa8.4□□□□□ -1.06
CPSF7-216ENST00000536548 DENND2CQ68D51 928 aa8.4□□□□□ -1.06
CPSF7-216ENST00000536548 APOBEC3HQ6NTF7 200 aaKnown RBP8.4□□□□□ -1.06
CPSF7-216ENST00000536548 HIBCHQ6NVY1 386 aaPredicted RBP8.4□□□□□ -1.06
CPSF7-216ENST00000536548 BTNL9Q6UXG8 535 aa8.4□□□□□ -1.06
CPSF7-216ENST00000536548 H2AFVQ71UI9 128 aa8.4□□□□□ -1.06
CPSF7-216ENST00000536548 TAOK1Q7L7X3 1001 aa8.4□□□□□ -1.06
CPSF7-216ENST00000536548 FAM228AQ86W67 206 aa8.4□□□□□ -1.06
CPSF7-216ENST00000536548 TRIM59Q8IWR1 403 aa8.4□□□□□ -1.06
CPSF7-216ENST00000536548 ZC3H3Q8IXZ2 948 aaKnown RBP8.4□□□□□ -1.06
CPSF7-216ENST00000536548 NEK9Q8TD19 979 aa8.4□□□□□ -1.06
CPSF7-216ENST00000536548 SNX29Q8TEQ0 813 aa8.4□□□□□ -1.06
CPSF7-216ENST00000536548 LRRC15Q8TF66 581 aa8.4□□□□□ -1.06
CPSF7-216ENST00000536548 TRIM43Q96BQ3 446 aaPredicted RBP8.4□□□□□ -1.06
CPSF7-216ENST00000536548 TIFAQ96CG3 184 aa8.4□□□□□ -1.06
CPSF7-216ENST00000536548 RUNDC3BQ96NL0 473 aa8.4□□□□□ -1.06
CPSF7-216ENST00000536548 PNMA5Q96PV4 448 aa8.4□□□□□ -1.06
CPSF7-216ENST00000536548 SPAG5Q96R06 1193 aa8.4□□□□□ -1.06
CPSF7-216ENST00000536548 GAS2L1Q99501 681 aaPredicted RBP8.4□□□□□ -1.06
CPSF7-216ENST00000536548 FMO2Q99518 471 aa8.4□□□□□ -1.06
CPSF7-216ENST00000536548 MMTAG2Q9BU76 263 aaKnown RBP8.4□□□□□ -1.06
CPSF7-216ENST00000536548 NT5C3AQ9H0P0 336 aa8.4□□□□□ -1.06
CPSF7-216ENST00000536548 GANQ9H2C0 597 aa8.4□□□□□ -1.06
CPSF7-216ENST00000536548 BLOC1S4Q9NUP1 217 aa8.4□□□□□ -1.06
CPSF7-216ENST00000536548 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.4□□□□□ -1.06
CPSF7-216ENST00000536548 NOP53Q9NZM5 478 aaKnown RBP8.4□□□□□ -1.06
CPSF7-216ENST00000536548 BAIAP2L1Q9UHR4 511 aa8.4□□□□□ -1.06
CPSF7-216ENST00000536548 MAD2L2Q9UI95 211 aa8.4□□□□□ -1.06
CPSF7-216ENST00000536548 AMFRQ9UKV5 643 aa8.4□□□□□ -1.06
CPSF7-216ENST00000536548 SLC12A4Q9UP95 1085 aa8.4□□□□□ -1.06
CPSF7-216ENST00000536548 DAAM1Q9Y4D1 1078 aa8.4□□□□□ -1.06
CPSF7-216ENST00000536548 AFG3L2Q9Y4W6 797 aa8.4□□□□□ -1.06
CPSF7-216ENST00000536548 ADAMTS3O15072 1205 aa8.39□□□□□ -1.07
CPSF7-216ENST00000536548 CETN3O15182 167 aa8.39□□□□□ -1.07
CPSF7-216ENST00000536548 DAPK3O43293 454 aa8.39□□□□□ -1.07
CPSF7-216ENST00000536548 NMT2O60551 498 aa8.39□□□□□ -1.07
CPSF7-216ENST00000536548 GPR37L1O60883 481 aa8.39□□□□□ -1.07
CPSF7-216ENST00000536548 NEBLO76041 1014 aa8.39□□□□□ -1.07
CPSF7-216ENST00000536548 MMEP08473 750 aa8.39□□□□□ -1.07
CPSF7-216ENST00000536548 TSPY3P0CV98 308 aa8.39□□□□□ -1.07
CPSF7-216ENST00000536548 TSPY8P0CW00 308 aa8.39□□□□□ -1.07
CPSF7-216ENST00000536548 FERP16591 822 aa8.39□□□□□ -1.07
CPSF7-216ENST00000536548 PTPRAP18433 802 aa8.39□□□□□ -1.07
CPSF7-216ENST00000536548 CCND1P24385 295 aa8.39□□□□□ -1.07
CPSF7-216ENST00000536548 PBX2P40425 430 aa8.39□□□□□ -1.07
CPSF7-216ENST00000536548 TXKP42681 527 aa8.39□□□□□ -1.07
CPSF7-216ENST00000536548 DRG2P55039 364 aaKnown RBP8.39□□□□□ -1.07
CPSF7-216ENST00000536548 ATP2B2Q01814 1243 aa8.39□□□□□ -1.07
CPSF7-216ENST00000536548 ICA1Q05084 483 aa8.39□□□□□ -1.07
CPSF7-216ENST00000536548 COASYQ13057 564 aa8.39□□□□□ -1.07
CPSF7-216ENST00000536548 E2F5Q15329 346 aa8.39□□□□□ -1.07
CPSF7-216ENST00000536548 PPP1R18Q6NYC8 613 aa8.39□□□□□ -1.07
CPSF7-216ENST00000536548 DYMQ7RTS9 669 aa8.39□□□□□ -1.07
CPSF7-216ENST00000536548 FRMD5Q7Z6J6 570 aa8.39□□□□□ -1.07
CPSF7-216ENST00000536548 PIGWQ7Z7B1 504 aa8.39□□□□□ -1.07
CPSF7-216ENST00000536548 SLFN11Q7Z7L1 901 aa8.39□□□□□ -1.07
CPSF7-216ENST00000536548 APLFQ8IW19 511 aaPredicted RBP8.39□□□□□ -1.07
CPSF7-216ENST00000536548 ZNF444Q8N0Y2 327 aaPredicted RBP8.39□□□□□ -1.07
CPSF7-216ENST00000536548 REXO1Q8N1G1 1221 aaKnown RBP8.39□□□□□ -1.07
CPSF7-216ENST00000536548 METTL13Q8N6R0 699 aa8.39□□□□□ -1.07
CPSF7-216ENST00000536548 FAM133AQ8N9E0 248 aa8.39□□□□□ -1.07
CPSF7-216ENST00000536548 LRRC57Q8N9N7 239 aa8.39□□□□□ -1.07
CPSF7-216ENST00000536548 OR2W6PQ8NHA6 318 aa8.39□□□□□ -1.07
CPSF7-216ENST00000536548 TPCN2Q8NHX9 752 aa8.39□□□□□ -1.07
CPSF7-216ENST00000536548 TBCKQ8TEA7 893 aa8.39□□□□□ -1.07
CPSF7-216ENST00000536548 DDX12PQ92771 950 aa8.39□□□□□ -1.07
CPSF7-216ENST00000536548 TEKT1Q969V4 418 aa8.39□□□□□ -1.07
CPSF7-216ENST00000536548 NSUN4Q96CB9 384 aaKnown RBP8.39□□□□□ -1.07
CPSF7-216ENST00000536548 EEF2KMTQ96G04 330 aa8.39□□□□□ -1.07
CPSF7-216ENST00000536548 MTMR9Q96QG7 549 aa8.39□□□□□ -1.07
CPSF7-216ENST00000536548 SELENOSQ9BQE4 189 aa8.39□□□□□ -1.07
CPSF7-216ENST00000536548 TMEM109Q9BVC6 243 aa8.39□□□□□ -1.07
CPSF7-216ENST00000536548 MKNK2Q9HBH9 465 aa8.39□□□□□ -1.07
CPSF7-216ENST00000536548 HOMER3Q9NSC5 361 aa8.39□□□□□ -1.07
CPSF7-216ENST00000536548 PANK4Q9NVE7 773 aa8.39□□□□□ -1.07
CPSF7-216ENST00000536548 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.39□□□□□ -1.078e-9■■■■■ 27.8
CPSF7-216ENST00000536548 TMOD2Q9NZR1 351 aa8.39□□□□□ -1.07
CPSF7-216ENST00000536548 CNOT8Q9UFF9 292 aaKnown RBP8.39□□□□□ -1.07
CPSF7-216ENST00000536548 MTRF1LQ9UGC7 380 aaKnown RBP8.39□□□□□ -1.07
CPSF7-216ENST00000536548 ADAMTS1Q9UHI8 967 aa8.39□□□□□ -1.07
CPSF7-216ENST00000536548 C15orf41Q9Y2V0 281 aa8.39□□□□□ -1.07
CPSF7-216ENST00000536548 SLC45A1Q9Y2W3 748 aa8.39□□□□□ -1.07
CPSF7-216ENST00000536548 DAGLAQ9Y4D2 1042 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms