RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 KCNN1Q92952 543 aa12.46□□□□□ -0.41
TNFRSF1A-208ENST00000536194 CCDC51Q96ER9 411 aa12.46□□□□□ -0.41
TNFRSF1A-208ENST00000536194 FGFBP2Q9BYJ0 223 aa12.46□□□□□ -0.41
TNFRSF1A-208ENST00000536194 TRIM9Q9C026 710 aa12.46□□□□□ -0.41
TNFRSF1A-208ENST00000536194 RNF39Q9H2S5 420 aa12.46□□□□□ -0.41
TNFRSF1A-208ENST00000536194 CUEDC2Q9H467 287 aa12.46□□□□□ -0.41
TNFRSF1A-208ENST00000536194 NXF3Q9H4D5 531 aaKnown RBP12.46□□□□□ -0.41
TNFRSF1A-208ENST00000536194 ZHX3Q9H4I2 956 aa12.46□□□□□ -0.41
TNFRSF1A-208ENST00000536194 PRDM12Q9H4Q4 367 aa12.46□□□□□ -0.41
TNFRSF1A-208ENST00000536194 SERTAD1Q9UHV2 236 aa12.46□□□□□ -0.41
TNFRSF1A-208ENST00000536194 MTUS1Q9ULD2 1270 aa12.46□□□□□ -0.41
TNFRSF1A-208ENST00000536194 HES2Q9Y543 173 aa12.46□□□□□ -0.41
TNFRSF1A-208ENST00000536194 IPPQ9Y573 584 aa12.46□□□□□ -0.41
TNFRSF1A-208ENST00000536194 MRPL42Q9Y6G3 142 aaKnown RBP12.46□□□□□ -0.41
TNFRSF1A-208ENST00000536194 K7ENM7 598 aa12.45□□□□□ -0.42
TNFRSF1A-208ENST00000536194 RFXAPO00287 272 aa12.45□□□□□ -0.42
TNFRSF1A-208ENST00000536194 ABLIM1O14639 778 aa12.45□□□□□ -0.42
TNFRSF1A-208ENST00000536194 TRAK2O60296 914 aa12.45□□□□□ -0.42
TNFRSF1A-208ENST00000536194 NPTXRO95502 500 aa12.45□□□□□ -0.42
TNFRSF1A-208ENST00000536194 SKIP12755 728 aa12.45□□□□□ -0.42
TNFRSF1A-208ENST00000536194 NMT1P30419 496 aaKnown RBP12.45□□□□□ -0.42
TNFRSF1A-208ENST00000536194 AFF1P51825 1210 aaKnown RBP12.45□□□□□ -0.42
TNFRSF1A-208ENST00000536194 SMTNP53814 917 aa12.45□□□□□ -0.42
TNFRSF1A-208ENST00000536194 ERVK-21P61565 698 aa12.45□□□□□ -0.42
TNFRSF1A-208ENST00000536194 ATF7IP2Q5U623 682 aa12.45□□□□□ -0.42
TNFRSF1A-208ENST00000536194 HAUS6Q7Z4H7 955 aa12.45□□□□□ -0.42
TNFRSF1A-208ENST00000536194 FIBCD1Q8N539 461 aa12.45□□□□□ -0.42
TNFRSF1A-208ENST00000536194 FSIP1Q8NA03 581 aa12.45□□□□□ -0.42
TNFRSF1A-208ENST00000536194 ARNTL2Q8WYA1 636 aa12.45□□□□□ -0.42
TNFRSF1A-208ENST00000536194 MRPS27Q92552 414 aaKnown RBP12.45□□□□□ -0.42
TNFRSF1A-208ENST00000536194 CLP1Q92989 425 aaKnown RBP12.45□□□□□ -0.42
TNFRSF1A-208ENST00000536194 TGS1Q96RS0 853 aaKnown RBP12.45□□□□□ -0.42
TNFRSF1A-208ENST00000536194 CDX2Q99626 313 aaPredicted RBP12.45□□□□□ -0.42
TNFRSF1A-208ENST00000536194 ACO2Q99798 780 aaKnown RBP12.45□□□□□ -0.42
TNFRSF1A-208ENST00000536194 TARS2Q9BW92 718 aaKnown RBP12.45□□□□□ -0.42
TNFRSF1A-208ENST00000536194 TMEM117Q9H0C3 514 aa12.45□□□□□ -0.42
TNFRSF1A-208ENST00000536194 PTPRHQ9HD43 1115 aa12.45□□□□□ -0.42
TNFRSF1A-208ENST00000536194 PDCD11Q14690 1871 aaKnown RBP12.44□□□□□ -0.42
TNFRSF1A-208ENST00000536194 CITO14578 2027 aa12.44□□□□□ -0.42
TNFRSF1A-208ENST00000536194 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.44□□□□□ -0.42
TNFRSF1A-208ENST00000536194 N4BP3O15049 544 aa12.44□□□□□ -0.42
TNFRSF1A-208ENST00000536194 B4GALT3O60512 393 aa12.44□□□□□ -0.42
TNFRSF1A-208ENST00000536194 LPXNO60711 386 aa12.44□□□□□ -0.42
TNFRSF1A-208ENST00000536194 OFD1O75665 1012 aa12.44□□□□□ -0.42
TNFRSF1A-208ENST00000536194 PPP1R37O75864 691 aa12.44□□□□□ -0.42
TNFRSF1A-208ENST00000536194 SLFN14P0C7P3 912 aa12.44□□□□□ -0.42
TNFRSF1A-208ENST00000536194 IDEP14735 1019 aa12.44□□□□□ -0.42
TNFRSF1A-208ENST00000536194 PROZP22891 400 aa12.44□□□□□ -0.42
TNFRSF1A-208ENST00000536194 AFMP43652 599 aa12.44□□□□□ -0.42
TNFRSF1A-208ENST00000536194 CASP5P51878 434 aa12.44□□□□□ -0.42
TNFRSF1A-208ENST00000536194 NCBP1Q09161 790 aaKnown RBP12.44□□□□□ -0.42
TNFRSF1A-208ENST00000536194 ADGRE1Q14246 886 aa12.44□□□□□ -0.42
TNFRSF1A-208ENST00000536194 ZC2HC1CQ53FD0 456 aaPredicted RBP12.44□□□□□ -0.42
TNFRSF1A-208ENST00000536194 CNNM4Q6P4Q7 775 aa12.44□□□□□ -0.42
TNFRSF1A-208ENST00000536194 FAM178BQ8IXR5 827 aa12.44□□□□□ -0.42
TNFRSF1A-208ENST00000536194 MYLIPQ8WY64 445 aa12.44□□□□□ -0.42
TNFRSF1A-208ENST00000536194 ZBTB45Q96K62 511 aaPredicted RBP12.44□□□□□ -0.42
TNFRSF1A-208ENST00000536194 IPO9Q96P70 1041 aaKnown RBP12.44□□□□□ -0.42
TNFRSF1A-208ENST00000536194 C7orf25Q9BPX7 421 aa12.44□□□□□ -0.42
TNFRSF1A-208ENST00000536194 STRA6Q9BX79 667 aa12.44□□□□□ -0.42
TNFRSF1A-208ENST00000536194 MRPL4Q9BYD3 311 aaKnown RBP12.44□□□□□ -0.42
TNFRSF1A-208ENST00000536194 HAPLN2Q9GZV7 340 aa12.44□□□□□ -0.42
TNFRSF1A-208ENST00000536194 BLZF1Q9H2G9 400 aa12.44□□□□□ -0.42
TNFRSF1A-208ENST00000536194 ST6GALNAC4Q9H4F1 302 aa12.44□□□□□ -0.42
TNFRSF1A-208ENST00000536194 CWH43Q9H720 699 aa12.44□□□□□ -0.42
TNFRSF1A-208ENST00000536194 MAGEF1Q9HAY2 307 aa12.44□□□□□ -0.42
TNFRSF1A-208ENST00000536194 PANK4Q9NVE7 773 aa12.44□□□□□ -0.42
TNFRSF1A-208ENST00000536194 RNF216Q9NWF9 866 aaPredicted RBP12.44□□□□□ -0.42
TNFRSF1A-208ENST00000536194 TBC1D7Q9P0N9 293 aa12.44□□□□□ -0.42
TNFRSF1A-208ENST00000536194 TNFSF13BQ9Y275 285 aa12.44□□□□□ -0.42
TNFRSF1A-208ENST00000536194 HOXA2O43364 376 aa12.43□□□□□ -0.42
TNFRSF1A-208ENST00000536194 SYKP43405 635 aa12.43□□□□□ -0.42
TNFRSF1A-208ENST00000536194 GTF2BQ00403 316 aa12.43□□□□□ -0.42
TNFRSF1A-208ENST00000536194 EHHADHQ08426 723 aa12.43□□□□□ -0.42
TNFRSF1A-208ENST00000536194 COASYQ13057 564 aa12.43□□□□□ -0.42
TNFRSF1A-208ENST00000536194 CUL4BQ13620 913 aa12.43□□□□□ -0.42
TNFRSF1A-208ENST00000536194 EPC2Q52LR7 807 aa12.43□□□□□ -0.42
TNFRSF1A-208ENST00000536194 SLC39A4Q6P5W5 647 aa12.43□□□□□ -0.42
TNFRSF1A-208ENST00000536194 ZNF720Q7Z2F6 126 aa12.43□□□□□ -0.42
TNFRSF1A-208ENST00000536194 TMEM192Q8IY95 271 aa12.43□□□□□ -0.42
TNFRSF1A-208ENST00000536194 CEP120Q8N960 986 aa12.43□□□□□ -0.42
TNFRSF1A-208ENST00000536194 GLIS3Q8NEA6 775 aa12.43□□□□□ -0.42
TNFRSF1A-208ENST00000536194 GDPD5Q8WTR4 605 aa12.43□□□□□ -0.42
TNFRSF1A-208ENST00000536194 HPS3Q969F9 1004 aa12.43□□□□□ -0.42
TNFRSF1A-208ENST00000536194 PAGE5Q96GU1 130 aa12.43□□□□□ -0.42
TNFRSF1A-208ENST00000536194 PYM1Q9BRP8 204 aaKnown RBP12.43□□□□□ -0.42
TNFRSF1A-208ENST00000536194 APOL6Q9BWW8 343 aa12.43□□□□□ -0.42
TNFRSF1A-208ENST00000536194 CDT1Q9H211 546 aa12.43□□□□□ -0.42
TNFRSF1A-208ENST00000536194 CXCL16Q9H2A7 254 aa12.43□□□□□ -0.42
TNFRSF1A-208ENST00000536194 IKZF4Q9H2S9 585 aa12.43□□□□□ -0.42
TNFRSF1A-208ENST00000536194 RSAD1Q9HA92 442 aa12.43□□□□□ -0.42
TNFRSF1A-208ENST00000536194 OLFML3Q9NRN5 406 aa12.43□□□□□ -0.42
TNFRSF1A-208ENST00000536194 TYW1Q9NV66 732 aaKnown RBP12.43□□□□□ -0.42
TNFRSF1A-208ENST00000536194 SEL1LQ9UBV2 794 aa12.43□□□□□ -0.42
TNFRSF1A-208ENST00000536194 TBX20Q9UMR3 447 aa12.43□□□□□ -0.42
TNFRSF1A-208ENST00000536194 INPP5FQ9Y2H2 1132 aa12.43□□□□□ -0.42
TNFRSF1A-208ENST00000536194 ANK1P16157 1881 aa12.42□□□□□ -0.42
TNFRSF1A-208ENST00000536194 TISP43B9A030 160 aa12.42□□□□□ -0.42
TNFRSF1A-208ENST00000536194 C5orf67F2Z3F1 127 aa12.42□□□□□ -0.42
TNFRSF1A-208ENST00000536194 H0YCG3 227 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms