RNA–Protein interactions for RNA: ENST00000535941.5

COL21A1-212, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL21A1, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-212ENST00000535941 SEPT9Q9UHD8 586 aaPredicted RBP8.7□□□□□ -1.02
COL21A1-212ENST00000535941 EXOC7Q9UPT5 735 aa8.7□□□□□ -1.02
COL21A1-212ENST00000535941 Q9Y3F1 56 aa8.7□□□□□ -1.02
COL21A1-212ENST00000535941 FHOD1Q9Y613 1164 aa8.7□□□□□ -1.02
COL21A1-212ENST00000535941 A0A0B4J269 797 aa8.7□□□□□ -1.02
COL21A1-212ENST00000535941 NRDCO43847 1150 aa8.7□□□□□ -1.02
COL21A1-212ENST00000535941 N4BP1O75113 896 aaKnown RBP8.7□□□□□ -1.02
COL21A1-212ENST00000535941 TPM1P09493 284 aa8.7□□□□□ -1.02
COL21A1-212ENST00000535941 TRIM21P19474 475 aaKnown RBP8.7□□□□□ -1.02
COL21A1-212ENST00000535941 CASQ1P31415 396 aa8.7□□□□□ -1.02
COL21A1-212ENST00000535941 LAMC2Q13753 1193 aa8.7□□□□□ -1.02
COL21A1-212ENST00000535941 PSMD6Q15008 389 aa8.7□□□□□ -1.02
COL21A1-212ENST00000535941 DUSP28Q4G0W2 176 aa8.7□□□□□ -1.02
COL21A1-212ENST00000535941 GBP6Q6ZN66 633 aa8.7□□□□□ -1.02
COL21A1-212ENST00000535941 IFNL1Q8IU54 200 aa8.7□□□□□ -1.02
COL21A1-212ENST00000535941 EHBP1Q8NDI1 1231 aa8.7□□□□□ -1.02
COL21A1-212ENST00000535941 CXorf38Q8TB03 319 aa8.7□□□□□ -1.02
COL21A1-212ENST00000535941 VTI1AQ96AJ9 217 aa8.7□□□□□ -1.02
COL21A1-212ENST00000535941 STK33Q9BYT3 514 aa8.7□□□□□ -1.02
COL21A1-212ENST00000535941 FLRT1Q9NZU1 646 aa8.7□□□□□ -1.02
COL21A1-212ENST00000535941 DNAI1Q9UI46 699 aa8.7□□□□□ -1.02
COL21A1-212ENST00000535941 NCANO14594 1321 aa8.7□□□□□ -1.02
COL21A1-212ENST00000535941 KIF11P52732 1056 aa8.7□□□□□ -1.02
COL21A1-212ENST00000535941 MCL1Q07820 350 aa8.7□□□□□ -1.02
COL21A1-212ENST00000535941 TTLL4Q14679 1199 aa8.7□□□□□ -1.02
COL21A1-212ENST00000535941 ELF2Q15723 593 aa8.7□□□□□ -1.02
COL21A1-212ENST00000535941 IER5Q5VY09 327 aa8.7□□□□□ -1.02
COL21A1-212ENST00000535941 PHLDB3Q6NSJ2 640 aa8.7□□□□□ -1.02
COL21A1-212ENST00000535941 FBXO38Q6PIJ6 1188 aa8.7□□□□□ -1.02
COL21A1-212ENST00000535941 SYT10Q6XYQ8 523 aa8.7□□□□□ -1.02
COL21A1-212ENST00000535941 RSRC2Q7L4I2 434 aaKnown RBP8.7□□□□□ -1.02
COL21A1-212ENST00000535941 TRAPPC11Q7Z392 1133 aa8.7□□□□□ -1.02
COL21A1-212ENST00000535941 ANKRD13CQ8N6S4 541 aa8.7□□□□□ -1.02
COL21A1-212ENST00000535941 ZNF516Q92618 1163 aa8.7□□□□□ -1.02
COL21A1-212ENST00000535941 NCAPGQ9BPX3 1015 aa8.7□□□□□ -1.02
COL21A1-212ENST00000535941 LACRTQ9GZZ8 138 aa8.7□□□□□ -1.02
COL21A1-212ENST00000535941 TMEM117Q9H0C3 514 aa8.7□□□□□ -1.02
COL21A1-212ENST00000535941 KMT5AQ9NQR1 393 aa8.7□□□□□ -1.02
COL21A1-212ENST00000535941 TRMT1Q9NXH9 659 aaKnown RBP8.7□□□□□ -1.02
COL21A1-212ENST00000535941 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.7□□□□□ -1.02
COL21A1-212ENST00000535941 INTUQ9ULD6 942 aa8.7□□□□□ -1.02
COL21A1-212ENST00000535941 SAMM50Q9Y512 469 aa8.7□□□□□ -1.02
COL21A1-212ENST00000535941 DENND3A2RUS2 1198 aa8.69□□□□□ -1.02
COL21A1-212ENST00000535941 EXTL3O43909 919 aa8.69□□□□□ -1.02
COL21A1-212ENST00000535941 ZC3H11AO75152 810 aaKnown RBP eCLIP8.69□□□□□ -1.02
COL21A1-212ENST00000535941 ACTN1P12814 892 aa8.69□□□□□ -1.02
COL21A1-212ENST00000535941 VAMP7P51809 220 aa8.69□□□□□ -1.02
COL21A1-212ENST00000535941 HADHBP55084 474 aaKnown RBP8.69□□□□□ -1.02
COL21A1-212ENST00000535941 DRP2Q13474 957 aa8.69□□□□□ -1.02
COL21A1-212ENST00000535941 TUBB2AQ13885 445 aa8.69□□□□□ -1.02
COL21A1-212ENST00000535941 SLC18A3Q16572 532 aa8.69□□□□□ -1.02
COL21A1-212ENST00000535941 EXOC3L4Q17RC7 722 aa8.69□□□□□ -1.02
COL21A1-212ENST00000535941 FAM102BQ5T8I3 360 aa8.69□□□□□ -1.02
COL21A1-212ENST00000535941 TSHZ1Q6ZSZ6 1077 aa8.69□□□□□ -1.02
COL21A1-212ENST00000535941 HS2ST1Q7LGA3 356 aa8.69□□□□□ -1.02
COL21A1-212ENST00000535941 PLEKHH3Q7Z736 793 aa8.69□□□□□ -1.02
COL21A1-212ENST00000535941 HELQQ8TDG4 1101 aa8.69□□□□□ -1.02
COL21A1-212ENST00000535941 TUBB2BQ9BVA1 445 aa8.69□□□□□ -1.02
COL21A1-212ENST00000535941 INTS2Q9H0H0 1204 aaKnown RBP8.69□□□□□ -1.02
COL21A1-212ENST00000535941 APEX2Q9UBZ4 518 aa8.69□□□□□ -1.02
COL21A1-212ENST00000535941 ZNF215Q9UL58 517 aaPredicted RBP8.69□□□□□ -1.02
COL21A1-212ENST00000535941 BZW2Q9Y6E2 419 aaKnown RBP8.69□□□□□ -1.02
COL21A1-212ENST00000535941 PTPRDP23468 1912 aa8.69□□□□□ -1.02
COL21A1-212ENST00000535941 MBLAC1A4D2B0 266 aaPredicted RBP8.69□□□□□ -1.02
COL21A1-212ENST00000535941 MYO1CO00159 1063 aa8.69□□□□□ -1.02
COL21A1-212ENST00000535941 C4BPAP04003 597 aaKnown RBP8.69□□□□□ -1.02
COL21A1-212ENST00000535941 SMPD1P17405 629 aa8.69□□□□□ -1.02
COL21A1-212ENST00000535941 GYS2P54840 703 aa8.69□□□□□ -1.02
COL21A1-212ENST00000535941 SNRNP35Q16560 246 aaKnown RBP8.69□□□□□ -1.02
COL21A1-212ENST00000535941 ZNF484Q5JVG2 852 aa8.69□□□□□ -1.02
COL21A1-212ENST00000535941 C10orf76Q5T2E6 689 aa8.69□□□□□ -1.02
COL21A1-212ENST00000535941 ZNF571Q7Z3V5 609 aaPredicted RBP8.69□□□□□ -1.02
COL21A1-212ENST00000535941 KIFC3Q9BVG8 833 aa8.69□□□□□ -1.02
COL21A1-212ENST00000535941 SMARCAD1Q9H4L7 1026 aa8.69□□□□□ -1.02
COL21A1-212ENST00000535941 IFT122Q9HBG6 1241 aa8.69□□□□□ -1.02
COL21A1-212ENST00000535941 TMEM8AQ9HCN3 771 aa8.69□□□□□ -1.02
COL21A1-212ENST00000535941 FAM207AQ9NSI2 230 aaPredicted RBP8.69□□□□□ -1.02
COL21A1-212ENST00000535941 GCNT4Q9P109 453 aa8.69□□□□□ -1.02
COL21A1-212ENST00000535941 SALL4Q9UJQ4 1053 aa8.69□□□□□ -1.02
COL21A1-212ENST00000535941 NLRC5Q86WI3 1866 aa8.69□□□□□ -1.02
COL21A1-212ENST00000535941 A0A0A6YYK5 440 aaPredicted RBP8.69□□□□□ -1.02
COL21A1-212ENST00000535941 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.69□□□□□ -1.02
COL21A1-212ENST00000535941 A6NJR5 290 aa8.69□□□□□ -1.02
COL21A1-212ENST00000535941 TRIM66O15016 1216 aa8.69□□□□□ -1.02
COL21A1-212ENST00000535941 LGALS2P05162 132 aa8.69□□□□□ -1.02
COL21A1-212ENST00000535941 MMP3P08254 477 aa8.69□□□□□ -1.02
COL21A1-212ENST00000535941 PRLRP16471 622 aa8.69□□□□□ -1.02
COL21A1-212ENST00000535941 SMTNP53814 917 aa8.69□□□□□ -1.02
COL21A1-212ENST00000535941 INHBEP58166 350 aa8.69□□□□□ -1.02
COL21A1-212ENST00000535941 MBTD1Q05BQ5 628 aa8.69□□□□□ -1.02
COL21A1-212ENST00000535941 IQSEC1Q6DN90 963 aa8.69□□□□□ -1.02
COL21A1-212ENST00000535941 CPLX3Q8WVH0 158 aa8.69□□□□□ -1.02
COL21A1-212ENST00000535941 COPS5Q92905 334 aa8.69□□□□□ -1.02
COL21A1-212ENST00000535941 SH2D3AQ9BRG2 576 aa8.69□□□□□ -1.02
COL21A1-212ENST00000535941 UPF3AQ9H1J1 476 aaKnown RBP8.69□□□□□ -1.02
COL21A1-212ENST00000535941 DEF6Q9H4E7 631 aa8.69□□□□□ -1.02
COL21A1-212ENST00000535941 KIAA1586Q9HCI6 787 aa8.69□□□□□ -1.02
COL21A1-212ENST00000535941 TCEAL9Q9UHQ7 104 aa8.69□□□□□ -1.02
COL21A1-212ENST00000535941 PCDHGC5Q9Y5F6 944 aa8.69□□□□□ -1.02
COL21A1-212ENST00000535941 PTPRJQ12913 1337 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms