RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 ALG3Q92685 438 aa14.19□□□□□ -0.14
LDLR-203ENST00000535915 ZBED3Q96IU2 234 aaPredicted RBP14.19□□□□□ -0.14
LDLR-203ENST00000535915 KIAA1683Q9H0B3 1180 aa14.19□□□□□ -0.14
LDLR-203ENST00000535915 RAB17Q9H0T7 212 aa14.19□□□□□ -0.14
LDLR-203ENST00000535915 ST6GALNAC4Q9H4F1 302 aa14.19□□□□□ -0.14
LDLR-203ENST00000535915 MAP3K20Q9NYL2 800 aaKnown RBP14.19□□□□□ -0.14
LDLR-203ENST00000535915 WDR64B1ANS9 1081 aa14.19□□□□□ -0.14
LDLR-203ENST00000535915 MAPK13O15264 365 aa14.19□□□□□ -0.14
LDLR-203ENST00000535915 DPEP1P16444 411 aa14.19□□□□□ -0.14
LDLR-203ENST00000535915 HADHBP55084 474 aaKnown RBP14.19□□□□□ -0.14
LDLR-203ENST00000535915 CORO7P57737 925 aa14.19□□□□□ -0.14
LDLR-203ENST00000535915 SNRPFP62306 86 aaKnown RBP14.19□□□□□ -0.14
LDLR-203ENST00000535915 POU5F1Q01860 360 aaKnown RBP14.19□□□□□ -0.14
LDLR-203ENST00000535915 SNRNP35Q16560 246 aaKnown RBP14.19□□□□□ -0.14
LDLR-203ENST00000535915 NSMFQ6X4W1 530 aa14.19□□□□□ -0.14
LDLR-203ENST00000535915 SEC14L1Q92503 715 aa14.19□□□□□ -0.14
LDLR-203ENST00000535915 CCDC127Q96BQ5 260 aa14.19□□□□□ -0.14
LDLR-203ENST00000535915 ERVK-5Q9HDB9 667 aa14.19□□□□□ -0.14
LDLR-203ENST00000535915 PFASO15067 1338 aa14.19□□□□□ -0.14
LDLR-203ENST00000535915 LOC102724159A0A0B4J2E5 919 aa14.18□□□□□ -0.14
LDLR-203ENST00000535915 H0YGN5 161 aa14.18□□□□□ -0.14
LDLR-203ENST00000535915 NDUFAB1O14561 156 aa14.18□□□□□ -0.14
LDLR-203ENST00000535915 RTN2O75298 545 aa14.18□□□□□ -0.14
LDLR-203ENST00000535915 HPDP32754 393 aaPredicted RBP14.18□□□□□ -0.14
LDLR-203ENST00000535915 JAK3P52333 1124 aa14.18□□□□□ -0.14
LDLR-203ENST00000535915 PWP2Q15269 919 aaKnown RBP14.18□□□□□ -0.14
LDLR-203ENST00000535915 PPP2R5EQ16537 467 aa14.18□□□□□ -0.14
LDLR-203ENST00000535915 ARHGEF16Q5VV41 709 aa14.18□□□□□ -0.14
LDLR-203ENST00000535915 RNF207Q6ZRF8 634 aa14.18□□□□□ -0.14
LDLR-203ENST00000535915 TMC3Q7Z5M5 1100 aa14.18□□□□□ -0.14
LDLR-203ENST00000535915 CBWD2Q8IUF1 395 aa14.18□□□□□ -0.14
LDLR-203ENST00000535915 UBL4BQ8N7F7 174 aa14.18□□□□□ -0.14
LDLR-203ENST00000535915 SAAL1Q96ER3 474 aa14.18□□□□□ -0.14
LDLR-203ENST00000535915 CHORDC1Q9UHD1 332 aaPredicted RBP14.18□□□□□ -0.14
LDLR-203ENST00000535915 EXOC7Q9UPT5 735 aa14.18□□□□□ -0.14
LDLR-203ENST00000535915 NFS1Q9Y697 457 aa14.18□□□□□ -0.14
LDLR-203ENST00000535915 COL11A1P12107 1806 aaPredicted RBP14.18□□□□□ -0.14
LDLR-203ENST00000535915 ANKRD63C9JTQ0 380 aa14.18□□□□□ -0.14
LDLR-203ENST00000535915 CCNE2O96020 404 aa14.18□□□□□ -0.14
LDLR-203ENST00000535915 LSP1P33241 339 aa14.18□□□□□ -0.14
LDLR-203ENST00000535915 SMTNP53814 917 aa14.18□□□□□ -0.14
LDLR-203ENST00000535915 DHX9Q08211 1270 aaKnown RBP14.18□□□□□ -0.14
LDLR-203ENST00000535915 ZNF844Q08AG5 666 aa14.18□□□□□ -0.14
LDLR-203ENST00000535915 CLUL1Q15846 466 aa14.18□□□□□ -0.14
LDLR-203ENST00000535915 EMC10Q5UCC4 262 aa14.18□□□□□ -0.14
LDLR-203ENST00000535915 C11orf63Q6NUN7 778 aa14.18□□□□□ -0.14
LDLR-203ENST00000535915 AADACL2Q6P093 401 aa14.18□□□□□ -0.14
LDLR-203ENST00000535915 EPS8L1Q8TE68 723 aa14.18□□□□□ -0.14
LDLR-203ENST00000535915 PDCD2LQ9BRP1 358 aa14.18□□□□□ -0.14
LDLR-203ENST00000535915 KIFC3Q9BVG8 833 aa14.18□□□□□ -0.14
LDLR-203ENST00000535915 PXMP2Q9NR77 195 aa14.18□□□□□ -0.14
LDLR-203ENST00000535915 BCCIPQ9P287 314 aaKnown RBP eCLIP14.18□□□□□ -0.14
LDLR-203ENST00000535915 TBX20Q9UMR3 447 aa14.18□□□□□ -0.14
LDLR-203ENST00000535915 PARP14Q460N5 1801 aa14.18□□□□□ -0.14
LDLR-203ENST00000535915 ARID2Q68CP9 1835 aa14.18□□□□□ -0.14
LDLR-203ENST00000535915 SYNGAP1Q96PV0 1343 aa14.17□□□□□ -0.14
LDLR-203ENST00000535915 MIF4GDA9UHW6 222 aaKnown RBP14.17□□□□□ -0.14
LDLR-203ENST00000535915 CYP26A1O43174 497 aa14.17□□□□□ -0.14
LDLR-203ENST00000535915 VCAM1P19320 739 aa14.17□□□□□ -0.14
LDLR-203ENST00000535915 KCNA3P22001 575 aa14.17□□□□□ -0.14
LDLR-203ENST00000535915 SFNP31947 248 aa14.17□□□□□ -0.14
LDLR-203ENST00000535915 MFAP3P55082 362 aa14.17□□□□□ -0.14
LDLR-203ENST00000535915 KRT76Q01546 638 aa14.17□□□□□ -0.14
LDLR-203ENST00000535915 DMP1Q13316 513 aaPredicted RBP14.17□□□□□ -0.14
LDLR-203ENST00000535915 MTMR2Q13614 643 aa14.17□□□□□ -0.14
LDLR-203ENST00000535915 MESDQ14696 234 aa14.17□□□□□ -0.14
LDLR-203ENST00000535915 RUFY4Q6ZNE9 571 aa14.17□□□□□ -0.14
LDLR-203ENST00000535915 NOP9Q86U38 636 aaKnown RBP14.17□□□□□ -0.14
LDLR-203ENST00000535915 SLC47A2Q86VL8 602 aa14.17□□□□□ -0.14
LDLR-203ENST00000535915 FAM71AQ8IYT1 594 aa14.17□□□□□ -0.14
LDLR-203ENST00000535915 SLC17A8Q8NDX2 589 aa14.17□□□□□ -0.14
LDLR-203ENST00000535915 KRT35Q92764 455 aa14.17□□□□□ -0.14
LDLR-203ENST00000535915 PCDHB18PQ96TA0 734 aa14.17□□□□□ -0.14
LDLR-203ENST00000535915 ACP6Q9NPH0 428 aa14.17□□□□□ -0.14
LDLR-203ENST00000535915 ATMINO43313 823 aaPredicted RBP14.17□□□□□ -0.14
LDLR-203ENST00000535915 ZBED4O75132 1171 aa14.17□□□□□ -0.14
LDLR-203ENST00000535915 CHRNB2P17787 502 aa14.17□□□□□ -0.14
LDLR-203ENST00000535915 RXRBP28702 533 aa14.17□□□□□ -0.14
LDLR-203ENST00000535915 CNGA1P29973 690 aa14.17□□□□□ -0.14
LDLR-203ENST00000535915 ADSSP30520 456 aa14.17□□□□□ -0.14
LDLR-203ENST00000535915 TMEM161BQ8NDZ6 487 aa14.17□□□□□ -0.14
LDLR-203ENST00000535915 GLG1Q92896 1179 aa14.17□□□□□ -0.14
LDLR-203ENST00000535915 KREMEN1Q96MU8 473 aa14.17□□□□□ -0.14
LDLR-203ENST00000535915 FMO2Q99518 471 aa14.17□□□□□ -0.14
LDLR-203ENST00000535915 ANKEF1Q9NU02 776 aa14.17□□□□□ -0.14
LDLR-203ENST00000535915 NOCTQ9UK39 431 aaKnown RBP14.17□□□□□ -0.14
LDLR-203ENST00000535915 MYH9P35579 1960 aaKnown RBP14.17□□□□□ -0.14
LDLR-203ENST00000535915 DENND3A2RUS2 1198 aa14.17□□□□□ -0.14
LDLR-203ENST00000535915 MDH1P40925 334 aaKnown RBP14.17□□□□□ -0.14
LDLR-203ENST00000535915 MAGEA9P43362 315 aa14.17□□□□□ -0.14
LDLR-203ENST00000535915 NPTX2P47972 431 aa14.17□□□□□ -0.14
LDLR-203ENST00000535915 MARCKSL1P49006 195 aa14.17□□□□□ -0.14
LDLR-203ENST00000535915 KRT39Q6A163 491 aa14.17□□□□□ -0.14
LDLR-203ENST00000535915 ATP8B4Q8TF62 1192 aa14.17□□□□□ -0.14
LDLR-203ENST00000535915 SEMA4DQ92854 862 aa14.17□□□□□ -0.14
LDLR-203ENST00000535915 POP1Q99575 1024 aaKnown RBP14.17□□□□□ -0.14
LDLR-203ENST00000535915 ZSWIM1Q9BR11 485 aa14.17□□□□□ -0.14
LDLR-203ENST00000535915 ERP44Q9BS26 406 aa14.17□□□□□ -0.14
LDLR-203ENST00000535915 FAM107BQ9H098 131 aa14.17□□□□□ -0.14
LDLR-203ENST00000535915 VPS33BQ9H267 617 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms