RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 N4BP3O15049 544 aa13.25□□□□□ -0.29
CHD4-203ENST00000535717 TLL1O43897 1013 aa13.25□□□□□ -0.29
CHD4-203ENST00000535717 ZNF623O75123 536 aa13.25□□□□□ -0.29
CHD4-203ENST00000535717 PPP1R37O75864 691 aa13.25□□□□□ -0.29
CHD4-203ENST00000535717 STAG3L1P0CL83 205 aa13.25□□□□□ -0.29
CHD4-203ENST00000535717 MYBP10242 640 aa13.25□□□□□ -0.29
CHD4-203ENST00000535717 MYOGP15173 224 aa13.25□□□□□ -0.29
CHD4-203ENST00000535717 HTRA4P83105 476 aaPredicted RBP13.25□□□□□ -0.29
CHD4-203ENST00000535717 EHHADHQ08426 723 aa13.25□□□□□ -0.29
CHD4-203ENST00000535717 DPYDQ12882 1025 aa13.25□□□□□ -0.29
CHD4-203ENST00000535717 POSTNQ15063 836 aa13.25□□□□□ -0.29
CHD4-203ENST00000535717 TMEM132AQ24JP5 1023 aa13.25□□□□□ -0.29
CHD4-203ENST00000535717 ATF7IP2Q5U623 682 aa13.25□□□□□ -0.29
CHD4-203ENST00000535717 EEF1DP3Q658K8 133 aa13.25□□□□□ -0.29
CHD4-203ENST00000535717 SLC27A1Q6PCB7 646 aa13.25□□□□□ -0.29
CHD4-203ENST00000535717 RNF169Q8NCN4 708 aa13.25□□□□□ -0.29
CHD4-203ENST00000535717 SMG8Q8ND04 991 aaKnown RBP13.25□□□□□ -0.29
CHD4-203ENST00000535717 SLC17A8Q8NDX2 589 aa13.25□□□□□ -0.29
CHD4-203ENST00000535717 GLIS3Q8NEA6 775 aa13.25□□□□□ -0.29
CHD4-203ENST00000535717 RAD9AQ99638 391 aa13.25□□□□□ -0.29
CHD4-203ENST00000535717 PBX4Q9BYU1 374 aa13.25□□□□□ -0.29
CHD4-203ENST00000535717 ELAC1Q9H777 363 aaKnown RBP13.25□□□□□ -0.29
CHD4-203ENST00000535717 TMEM161AQ9NX61 479 aa13.25□□□□□ -0.29
CHD4-203ENST00000535717 LRFN2Q9ULH4 789 aa13.25□□□□□ -0.29
CHD4-203ENST00000535717 YBX2Q9Y2T7 364 aaKnown RBP13.25□□□□□ -0.29
CHD4-203ENST00000535717 PCDHB7Q9Y5E2 793 aa13.25□□□□□ -0.29
CHD4-203ENST00000535717 GBF1Q92538 1859 aa13.25□□□□□ -0.29
CHD4-203ENST00000535717 CHD7Q9P2D1 2997 aa13.24□□□□□ -0.29
CHD4-203ENST00000535717 KINO60870 393 aaKnown RBP13.24□□□□□ -0.29
CHD4-203ENST00000535717 DGKIO75912 1065 aa13.24□□□□□ -0.29
CHD4-203ENST00000535717 GCNT3O95395 438 aa13.24□□□□□ -0.29
CHD4-203ENST00000535717 NPTXRO95502 500 aa13.24□□□□□ -0.29
CHD4-203ENST00000535717 EOMESO95936 686 aa13.24□□□□□ -0.29
CHD4-203ENST00000535717 RPN1P04843 607 aaKnown RBP13.24□□□□□ -0.29
CHD4-203ENST00000535717 SKIP12755 728 aa13.24□□□□□ -0.29
CHD4-203ENST00000535717 ABCD1P33897 745 aa13.24□□□□□ -0.29
CHD4-203ENST00000535717 GATMP50440 423 aa13.24□□□□□ -0.29
CHD4-203ENST00000535717 RAB27AP51159 221 aa13.24□□□□□ -0.29
CHD4-203ENST00000535717 KCNA1Q09470 495 aa13.24□□□□□ -0.29
CHD4-203ENST00000535717 PNOCQ13519 176 aa13.24□□□□□ -0.29
CHD4-203ENST00000535717 KMT5BQ4FZB7 885 aa13.24□□□□□ -0.29
CHD4-203ENST00000535717 FAM26FQ5R3K3 315 aa13.24□□□□□ -0.29
CHD4-203ENST00000535717 ZPBP2Q6X784 338 aa13.24□□□□□ -0.29
CHD4-203ENST00000535717 MRPL10Q7Z7H8 261 aaKnown RBP13.24□□□□□ -0.29
CHD4-203ENST00000535717 MAP4K3Q8IVH8 894 aa13.24□□□□□ -0.29
CHD4-203ENST00000535717 LPPQ93052 612 aa13.24□□□□□ -0.29
CHD4-203ENST00000535717 HVCN1Q96D96 273 aa13.24□□□□□ -0.29
CHD4-203ENST00000535717 CCDC34Q96HJ3 373 aa13.24□□□□□ -0.29
CHD4-203ENST00000535717 RC3H2Q9HBD1 1191 aaKnown RBP13.24□□□□□ -0.29
CHD4-203ENST00000535717 PTPRHQ9HD43 1115 aa13.24□□□□□ -0.29
CHD4-203ENST00000535717 RNF19AQ9NV58 838 aa13.24□□□□□ -0.29
CHD4-203ENST00000535717 RNF216Q9NWF9 866 aaPredicted RBP13.24□□□□□ -0.29
CHD4-203ENST00000535717 TNFSF13BQ9Y275 285 aa13.24□□□□□ -0.29
CHD4-203ENST00000535717 PCDHA11Q9Y5I1 949 aa13.24□□□□□ -0.29
CHD4-203ENST00000535717 COL4A6Q14031 1691 aa13.24□□□□□ -0.29
CHD4-203ENST00000535717 LCHNA4D1U4 455 aa13.23□□□□□ -0.29
CHD4-203ENST00000535717 MEIS3P2A8K0S8 358 aa13.23□□□□□ -0.29
CHD4-203ENST00000535717 ABLIM1O14639 778 aa13.23□□□□□ -0.29
CHD4-203ENST00000535717 PIGRP01833 764 aa13.23□□□□□ -0.29
CHD4-203ENST00000535717 FGFR1P11362 822 aa13.23□□□□□ -0.29
CHD4-203ENST00000535717 PROZP22891 400 aa13.23□□□□□ -0.29
CHD4-203ENST00000535717 DNAJB2P25686 324 aa13.23□□□□□ -0.29
CHD4-203ENST00000535717 ALCAMQ13740 583 aa13.23□□□□□ -0.29
CHD4-203ENST00000535717 RAB30Q15771 203 aa13.23□□□□□ -0.29
CHD4-203ENST00000535717 L1TD1Q5T7N2 865 aaKnown RBP13.23□□□□□ -0.29
CHD4-203ENST00000535717 EPM2AIP1Q7L775 607 aaPredicted RBP13.23□□□□□ -0.29
CHD4-203ENST00000535717 ZNF689Q96CS4 500 aaPredicted RBP13.23□□□□□ -0.29
CHD4-203ENST00000535717 BICD1Q96G01 975 aa13.23□□□□□ -0.29
CHD4-203ENST00000535717 ZBTB45Q96K62 511 aaPredicted RBP13.23□□□□□ -0.29
CHD4-203ENST00000535717 YME1L1Q96TA2 773 aa13.23□□□□□ -0.29
CHD4-203ENST00000535717 TRIM6Q9C030 488 aaPredicted RBP13.23□□□□□ -0.29
CHD4-203ENST00000535717 RNF39Q9H2S5 420 aa13.23□□□□□ -0.29
CHD4-203ENST00000535717 IKZF4Q9H2S9 585 aa13.23□□□□□ -0.29
CHD4-203ENST00000535717 NXF3Q9H4D5 531 aaKnown RBP13.23□□□□□ -0.29
CHD4-203ENST00000535717 SLC39A2Q9NP94 309 aa13.23□□□□□ -0.29
CHD4-203ENST00000535717 EXOC1Q9NV70 894 aa13.23□□□□□ -0.29
CHD4-203ENST00000535717 MSRAQ9UJ68 235 aa13.23□□□□□ -0.29
CHD4-203ENST00000535717 HES2Q9Y543 173 aa13.23□□□□□ -0.29
CHD4-203ENST00000535717 IPPQ9Y573 584 aa13.23□□□□□ -0.29
CHD4-203ENST00000535717 INSL6Q9Y581 213 aa13.23□□□□□ -0.29
CHD4-203ENST00000535717 PCDHB13Q9Y5F0 798 aa13.23□□□□□ -0.29
CHD4-203ENST00000535717 ANKRD63C9JTQ0 380 aa13.22□□□□□ -0.29
CHD4-203ENST00000535717 GOLGA6L22H0YM25 854 aa13.22□□□□□ -0.29
CHD4-203ENST00000535717 HNRNPDLO14979 420 aaKnown RBP13.22□□□□□ -0.29
CHD4-203ENST00000535717 TOM1L1O75674 476 aa13.22□□□□□ -0.29
CHD4-203ENST00000535717 PRPF6O94906 941 aaKnown RBP13.22□□□□□ -0.29
CHD4-203ENST00000535717 ARHGEF15O94989 841 aa13.22□□□□□ -0.29
CHD4-203ENST00000535717 CA3P07451 260 aa13.22□□□□□ -0.29
CHD4-203ENST00000535717 HOXD13P35453 343 aa13.22□□□□□ -0.29
CHD4-203ENST00000535717 LIG4P49917 911 aa13.22□□□□□ -0.29
CHD4-203ENST00000535717 STK4Q13043 487 aa13.22□□□□□ -0.29
CHD4-203ENST00000535717 DCAF4L1Q3SXM0 396 aa13.22□□□□□ -0.29
CHD4-203ENST00000535717 CLLU1OSQ5K130 101 aa13.22□□□□□ -0.29
CHD4-203ENST00000535717 SLC39A4Q6P5W5 647 aa13.22□□□□□ -0.29
CHD4-203ENST00000535717 MPZL3Q6UWV2 235 aa13.22□□□□□ -0.29
CHD4-203ENST00000535717 AGMOQ6ZNB7 445 aa13.22□□□□□ -0.29
CHD4-203ENST00000535717 ZBTB33Q86T24 672 aa13.22□□□□□ -0.29
CHD4-203ENST00000535717 ELOA2Q8IYF1 753 aaPredicted RBP13.22□□□□□ -0.29
CHD4-203ENST00000535717 SP7Q8TDD2 431 aaPredicted RBP13.22□□□□□ -0.29
CHD4-203ENST00000535717 ERCC4Q92889 916 aaPredicted RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms