RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 HTRA3P83110 453 aa4.24□□□□□ -1.73
SNHG1-202ENST00000535689 MESP2Q0VG99 397 aa4.24□□□□□ -1.73
SNHG1-202ENST00000535689 ADAM9Q13443 819 aa4.24□□□□□ -1.73
SNHG1-202ENST00000535689 EZH2Q15910 746 aaKnown RBP4.24□□□□□ -1.73
SNHG1-202ENST00000535689 PTPN21Q16825 1174 aa4.24□□□□□ -1.73
SNHG1-202ENST00000535689 KRTAP19-4Q3LI73 84 aa4.24□□□□□ -1.73
SNHG1-202ENST00000535689 RPUSD2Q8IZ73 545 aaKnown RBP4.24□□□□□ -1.73
SNHG1-202ENST00000535689 LINC01356Q8N9X3 169 aa4.24□□□□□ -1.73
SNHG1-202ENST00000535689 FNIP1Q8TF40 1166 aa4.24□□□□□ -1.73
SNHG1-202ENST00000535689 GAB3Q8WWW8 586 aa4.24□□□□□ -1.73
SNHG1-202ENST00000535689 RELTQ969Z4 430 aa4.24□□□□□ -1.73
SNHG1-202ENST00000535689 FUBP3Q96I24 572 aaKnown RBP eCLIP4.24□□□□□ -1.73
SNHG1-202ENST00000535689 FAXDC2Q96IV6 333 aa4.24□□□□□ -1.73
SNHG1-202ENST00000535689 NUP88Q99567 741 aaPredicted RBP4.24□□□□□ -1.73
SNHG1-202ENST00000535689 TACO1Q9BSH4 297 aaKnown RBP4.24□□□□□ -1.73
SNHG1-202ENST00000535689 SGPP1Q9BX95 441 aa4.24□□□□□ -1.73
SNHG1-202ENST00000535689 GCM1Q9NP62 436 aa4.24□□□□□ -1.73
SNHG1-202ENST00000535689 JADE2Q9NQC1 790 aa4.24□□□□□ -1.73
SNHG1-202ENST00000535689 POLR3BQ9NW08 1133 aaPredicted RBP4.24□□□□□ -1.73
SNHG1-202ENST00000535689 H2AFY2Q9P0M6 372 aaPredicted RBP4.24□□□□□ -1.73
SNHG1-202ENST00000535689 PNMA8BQ9ULN7 279 aaPredicted RBP4.24□□□□□ -1.73
SNHG1-202ENST00000535689 WASF3Q9UPY6 502 aa4.24□□□□□ -1.73
SNHG1-202ENST00000535689 SLIT2O94813 1529 aa4.24□□□□□ -1.73
SNHG1-202ENST00000535689 SPATA31A3Q5VYP0 1347 aa4.23□□□□□ -1.73
SNHG1-202ENST00000535689 RPGRIP1LQ68CZ1 1315 aa4.23□□□□□ -1.73
SNHG1-202ENST00000535689 KIF1BO60333 1816 aa4.23□□□□□ -1.73
SNHG1-202ENST00000535689 KAT6BQ8WYB5 2073 aa4.23□□□□□ -1.73
SNHG1-202ENST00000535689 HFM1A2PYH4 1435 aa4.23□□□□□ -1.73
SNHG1-202ENST00000535689 DISP2A7MBM2 1401 aa4.23□□□□□ -1.73
SNHG1-202ENST00000535689 A0A0A6YYJ9 748 aa4.23□□□□□ -1.73
SNHG1-202ENST00000535689 FAM171A2A8MVW0 826 aa4.23□□□□□ -1.73
SNHG1-202ENST00000535689 NRP1O14786 923 aa4.23□□□□□ -1.73
SNHG1-202ENST00000535689 PLSCR1O15162 318 aa4.23□□□□□ -1.73
SNHG1-202ENST00000535689 NUAK1O60285 661 aa4.23□□□□□ -1.73
SNHG1-202ENST00000535689 SASH1O94885 1247 aa4.23□□□□□ -1.73
SNHG1-202ENST00000535689 HMGCRP04035 888 aa4.23□□□□□ -1.73
SNHG1-202ENST00000535689 AKAP5P24588 427 aa4.23□□□□□ -1.73
SNHG1-202ENST00000535689 HMGB2P26583 209 aaKnown RBP4.23□□□□□ -1.73
SNHG1-202ENST00000535689 ETV4P43268 484 aa4.23□□□□□ -1.73
SNHG1-202ENST00000535689 EPHB3P54753 998 aa4.23□□□□□ -1.73
SNHG1-202ENST00000535689 ERVK-21P61565 698 aa4.23□□□□□ -1.73
SNHG1-202ENST00000535689 MOGSQ13724 837 aa4.23□□□□□ -1.73
SNHG1-202ENST00000535689 TTF1Q15361 905 aaPredicted RBP4.23□□□□□ -1.73
SNHG1-202ENST00000535689 SEC23AQ15436 765 aa4.23□□□□□ -1.73
SNHG1-202ENST00000535689 ATP2B3Q16720 1220 aa4.23□□□□□ -1.73
SNHG1-202ENST00000535689 TMEM240Q5SV17 173 aa4.23□□□□□ -1.73
SNHG1-202ENST00000535689 TMEM200BQ69YZ2 307 aa4.23□□□□□ -1.73
SNHG1-202ENST00000535689 ESRP1Q6NXG1 681 aaKnown RBP4.23□□□□□ -1.73
SNHG1-202ENST00000535689 LIPIQ6XZB0 460 aa4.23□□□□□ -1.73
SNHG1-202ENST00000535689 PROSER1Q86XN7 944 aa4.23□□□□□ -1.73
SNHG1-202ENST00000535689 MIER2Q8N344 545 aa4.23□□□□□ -1.73
SNHG1-202ENST00000535689 FAM26EQ8N5C1 309 aa4.23□□□□□ -1.73
SNHG1-202ENST00000535689 STPG3Q8N7X2 389 aa4.23□□□□□ -1.73
SNHG1-202ENST00000535689 C1orf162Q8NEQ5 155 aaPredicted RBP4.23□□□□□ -1.73
SNHG1-202ENST00000535689 JDP2Q8WYK2 163 aa4.23□□□□□ -1.73
SNHG1-202ENST00000535689 DYDC2Q96IM9 177 aa4.23□□□□□ -1.73
SNHG1-202ENST00000535689 ZNF496Q96IT1 587 aaPredicted RBP4.23□□□□□ -1.73
SNHG1-202ENST00000535689 WDR92Q96MX6 357 aa4.23□□□□□ -1.73
SNHG1-202ENST00000535689 UIMC1Q96RL1 719 aa4.23□□□□□ -1.73
SNHG1-202ENST00000535689 ADI1Q9BV57 179 aa4.23□□□□□ -1.73
SNHG1-202ENST00000535689 ANO3Q9BYT9 981 aa4.23□□□□□ -1.73
SNHG1-202ENST00000535689 ASPSCR1Q9BZE9 553 aa4.23□□□□□ -1.73
SNHG1-202ENST00000535689 PITHD1Q9GZP4 211 aaPredicted RBP4.23□□□□□ -1.73
SNHG1-202ENST00000535689 POFUT1Q9H488 388 aa4.23□□□□□ -1.73
SNHG1-202ENST00000535689 MTG2Q9H4K7 406 aa4.23□□□□□ -1.73
SNHG1-202ENST00000535689 TCF7L1Q9HCS4 588 aa4.23□□□□□ -1.73
SNHG1-202ENST00000535689 TOPORSQ9NS56 1045 aaPredicted RBP4.23□□□□□ -1.73
SNHG1-202ENST00000535689 GPR45Q9Y5Y3 372 aa4.23□□□□□ -1.73
SNHG1-202ENST00000535689 ARHGEF10O15013 1369 aa4.23□□□□□ -1.73
SNHG1-202ENST00000535689 GLI3P10071 1580 aa4.23□□□□□ -1.73
SNHG1-202ENST00000535689 PTPRUQ92729 1446 aa4.22□□□□□ -1.73
SNHG1-202ENST00000535689 IQGAP3Q86VI3 1631 aa4.22□□□□□ -1.73
SNHG1-202ENST00000535689 XRN1Q8IZH2 1706 aaKnown RBP4.22□□□□□ -1.73
SNHG1-202ENST00000535689 RASSF10A6NK89 507 aa4.22□□□□□ -1.73
SNHG1-202ENST00000535689 GABRDO14764 452 aa4.22□□□□□ -1.73
SNHG1-202ENST00000535689 XPOTO43592 962 aaKnown RBP4.22□□□□□ -1.73
SNHG1-202ENST00000535689 OPHN1O60890 802 aa4.22□□□□□ -1.73
SNHG1-202ENST00000535689 KNG1P01042 644 aa4.22□□□□□ -1.73
SNHG1-202ENST00000535689 ZNF28P17035 718 aa4.22□□□□□ -1.73
SNHG1-202ENST00000535689 PI3P19957 117 aa4.22□□□□□ -1.73
SNHG1-202ENST00000535689 CYP2C19P33261 490 aa4.22□□□□□ -1.73
SNHG1-202ENST00000535689 MC3RP41968 323 aa4.22□□□□□ -1.73
SNHG1-202ENST00000535689 LIMS1P48059 325 aa4.22□□□□□ -1.73
SNHG1-202ENST00000535689 KCNC1P48547 511 aa4.22□□□□□ -1.73
SNHG1-202ENST00000535689 GJA9P57773 515 aa4.22□□□□□ -1.73
SNHG1-202ENST00000535689 EVA1CP58658 441 aa4.22□□□□□ -1.73
SNHG1-202ENST00000535689 LINC00310P59036 64 aa4.22□□□□□ -1.73
SNHG1-202ENST00000535689 IL13RA1P78552 427 aa4.22□□□□□ -1.73
SNHG1-202ENST00000535689 USP10Q14694 798 aaKnown RBP4.22□□□□□ -1.73
SNHG1-202ENST00000535689 EIF4HQ15056 248 aaKnown RBP4.22□□□□□ -1.73
SNHG1-202ENST00000535689 ACAP2Q15057 778 aa4.22□□□□□ -1.73
SNHG1-202ENST00000535689 PPP2R5AQ15172 486 aa4.22□□□□□ -1.73
SNHG1-202ENST00000535689 MUM1L1Q5H9M0 696 aa4.22□□□□□ -1.73
SNHG1-202ENST00000535689 ZNF648Q5T619 568 aaPredicted RBP4.22□□□□□ -1.73
SNHG1-202ENST00000535689 THEMIS2Q5TEJ8 643 aa4.22□□□□□ -1.73
SNHG1-202ENST00000535689 MBNL2Q5VZF2 373 aaKnown RBP4.22□□□□□ -1.73
SNHG1-202ENST00000535689 CCDC62Q6P9F0 684 aa4.22□□□□□ -1.73
SNHG1-202ENST00000535689 PDZD4Q76G19 769 aaPredicted RBP4.22□□□□□ -1.73
SNHG1-202ENST00000535689 CARFQ8N187 725 aa4.22□□□□□ -1.73
SNHG1-202ENST00000535689 GCDHQ92947 438 aaPredicted RBP4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms